Mouse U2af1-rs1 is a neomorphic imprinted gene

Molecular and Cellular Biology

Volumn 17, Issue 2, 1997, Pages 789-798

  Nabetani, Akira ^a   Hatada, Izuho ^a   Morisaki, Hiroko ^a   Oshimura, Mitsuo ^b   Mukai, Tsunehiro ^a  

^a NATIONAL CEREBRAL AND CARDIOVASCULAR CENTER   (Japan)

^b TOTTORI UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; CHROMOSOME 11; CHROMOSOME 2; CONTROLLED STUDY; DNA METHYLATION; GENE ASSIGNMENT; GENE EXPRESSION REGULATION; GENE MAPPING; GENE STRUCTURE; GENOME IMPRINTING; MOUSE; NEWBORN; NONHUMAN; PRIORITY JOURNAL; RETROPOSON; SEQUENCE HOMOLOGY; TRANSPOSON;

EID: 0031039180     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.17.2.789     Document Type: Article

References (49)

1. Ariel, M., E. Robinson, J. R. McCarrey, and H. Cedar. 1995. Gamete-specific methylation correlates with imprinting of the murine Xist gene. Nat. Genet. 9:312-315.
2. Barlow, D. P. 1995. Gametic imprinting in mammals. Science 270:1610-1613.
3. Barnes, W. M. 1994. PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates. Proc. Natl. Acad. Sci. USA 91:2216-2220.
4. Bartolomei, M. S., A. L. Webber, M. E. Brunkow, and S. M. Tilghman. 1993. Epigenetic mechanisms underlying the imprinting of the mouse H19 gene. Genes Dev. 7:1663-1673.
5. Brandeis, C. V., T. Kafri, M. Ariel, J. R. Chaillet, J. R. McCarrey, A. Razin, and H. Cedar. 1993. The ontogeny of allele-specific methylation associated with imprinted genes in the mouse. EMBO J. 12:3669-3677.
6. Cheng, S., C. Fockler, W. M. Barnes, and R. Higuchi. 1994. Effective amplification of long targets from cloned inserts and human genomic DNA. Proc. Natl. Acad. Sci. USA 91:5695-5699.
7. Duhl, D. M. J., H. Vrieling, K. A. Miller, G. L. Wolff, and G. S. Barsh. 1994. Neomorphic agouti mutations in obese yellow mice. Nat. Genet. 8:59-65.
8. Feinberg, A. P., and B. A. Vogelstein. 1983. A technique for radiolabelling DNA restriction fragments to high specific activity. Anal. Biochem. 132:6-13.
9. Ferguson, S. A., H. Sasaki, B. M. Cattanach, and M. A. Surani. 1993. Parental-origin-specific modification of the mouse H19 gene. Nature (London) 362:751-755.
10. Giddings, S. J., C. D. King, K. W. Harman, J. F. Flood, and L. R. Carnaghi. 1994. Allele specific inactivation of insulin 1 and 2, in the mouse yolk sac, indicates imprinting. Nat. Genet. 6:310-313.
11. Guillemot, F., T. Caspary, S. M. Tilghman, N. G. Copeland, D. J. Gilbert, N. A. Jenkins, D. J. Anderson, A. L. Joyner, J. Rossant, and A. Nagy. 1995. Genomic imprinting of Mash2, a mouse gene required for trophoblast development. Nat. Genet. 9:235-242.
12. Guillemot, F., L.-C. Lo, J. E. Johnson, A. Auerbach, D. J. Anderson, and A. L. Joyner. 1993. Mammalian achaete-scute homolog 1 is required for the early development of olfactory and autonomie neurons. Cell 75:463-476.
13. Hadchouel, M., H. Farza, D. Simon, P. Tiollais, and C. Pourcel. 1987. Maternal inhibition of hepatitis B surface antigen gene expression in transgenic mice correlates with de novo methylation. Nature (London) 329:454-456.
14. Haig, D. 1996. Do imprinted genes have few and small introns? BioEssays 18:351-353.
15. Hatada, I., Y. Hayashizaki, S. Hirotsune, H. Komatsubara, and T. Mukai. 1991. A genome scanning method for higher organisms using restriction sites as landmarks. Proc. Natl. Acad. Sci. USA 88:9523-9527.
16. Hatada, I., K. Kitagawa, T. Yamaoka, X. Wang, Y. Arai, K. Hashido, S. Ohishi, J. Masuda, J. Ogata, and T. Mukai. 1995. Allele-specific methylation and expression of an imprinted U2af1-rs1 (SP2) gene. Nucleic Acids Res. 23:36-41.
17. KIP2, a cyclin-dependent kinase inhibitor, in mouse. Nat. Genet. 11:204-206.
18. Hatada, I., T. Sugama, and T. Mukai. 1993. A new imprinted gene cloned by a methylation-sensitive genome scanning method. Nucleic Acids Res. 21:5577-5582.
19. Hurst, L. D., G. McVean, and T. Moore. 1996. Imprinted genes have few and small introns. Nat. Genet. 12:234-237.
20. Joslyn, G., M. Carlson, A. Thliveris, H. Albertsen, L. Gelbert, W. Samowitz, J. Groden, J. Stevens, L. Spirio, M. Robertson, L. Sargeant, K. Krapcho, E. Wolff, R. Burt, J. P. Hughes, J. Warrington, J. McPherson, J. Wasmuth, D. LePaslier, H. Abderrahim, D. Cohen, M. Leppert, and R. White. 1991. Identification of deletion mutations and three new genes at the familial polyposis locus. Cell 66:601-613.
21. Kalcheva, I., C. Plass, S. Sait, R. Eddy, T. Shows, C. D. Watkins, S. Camper, H. Shibata, T. Ueda, N. Takagi, Y. Hayashizaki, and V. Chapman. 1995. Comparative mapping of the imprinted U2afbpL gene on mouse chromosome 11 and human chromosome 5. Cytogenet. Cell Genet. 68:19-24.
22. Kay, G. F., G. D. Penny, D. Patel, A. Ashworth, N. Brockdorff, and S. Rastan. 1993. Expression of Xist during mouse development suggests a role in the initiation of X chromosome inactivation. Cell 72:171-182.
23. Khan, A. S., A. S. Wilcox, M. H. Polymeropoulos, J. A. Hopkins, T. J. Stevens, M. Robinson, A. K. Orpana, and J. M. Sikela. 1992. Single pass sequencing and physical and genetic mapping of human brain cDNAs. Nat. Genet. 2:180-185.
24. Kitagawa, K., I. Hatada, I. Kondo, and T. Mukai. Submitted for publication.
25. Kitagawa, K., X. Wang, I. Hatada, T. Yamaoka, H. Nojima, J. Inazawa, T. Abe, K. Mitsuya, M. Oshimura, A. Murata, M. Monden, and T. Mukai. 1995. Isolation and mapping of human homologues of an imprinted mouse gene U2af1-rs1. Genomics 30:257-263.
26. Koi, M., M. Shimizu, H. Morita, H. Yamada, and M. Oshimura. 1989. Construction of mouse A9 clones containing a single human chromosome tagged with neomycin-resistance gene via microcell fusion. Jpn. J. Cancer Res. 80:413-418.
27. iapy) is correlated with methylation state and is influenced by parental lineage. Genes Dev. 8:1463-1472.
28. Mukai, T. Unpublished data.
29. Nabetani, A. Unpublished data.
30. Nabetani, A., I. Hatada, H. Morisaki, and T. Mukai. 1996. Chromosome assignment and imprinting test for the mouse delta subunit of the cytosolic chaperonin containing TCP-1 (Cct4) gene to proximal chromosome 11. Genomics 34:246-249.
31. Neumann, B., P. Kubicka, and D. P. Barlow. 1995. Characteristics of imprinted genes. Nat. Genet. 9:12-13.
32. Pearsall, R. S., H. Shibata, A. Brozowska, K. Yoshino, K. Okuda, P. J. deJong, C. Plass, V. M. Chapman, Y. Hayashizaki, and W. A. Held. 1996. Absence of imprinting in U2AFBPL, a human homologue of the imprinted mouse gene U2afbp-rs. Biochem. Biophys. Res. Commun. 222:171-177.
33. Razin, A., and H. Cedar. 1994. DNA methylation and genomic imprinting. Cell 77:473-476.
34. Reik, W., A. Collick, M. L. Norris, S. C. Barton, and M. A. Surani. 1987. Genomic imprinting determines methylation of parental alleles in transgenic mice. Nature (London) 328:248-251.
35. Sanford, J. P., H. J. Clark, V. M. Chapman, and J. Rossant. 1987. Differences in DNA methylation during oogenesis and spermatogenesis and their persistence during early embryogenesis in the mouse. Genes Dev. 1:1039-1046.
36. Sapienza, C., A. C. Peterson, J. Rossant, and R. Balling. 1987. Degree of methylation of transgenes is dependent on gamete of origin. Nature (London) 328:251-254.
37. Sealy, P. G., P. A. Whittaker, and E. M. Southern. 1985. Removal of repeated sequences from hybridization probes. Nucleic Acids Res. 13:1905-1922.
38. Shibata, H., K. Yoshino, S. Sunahara, Y. Gondo, M. Katsuki, T. Ueda, M. Kamiya, M. Muramatsu, Y. Murakami, I. Kalcheva, C. Plass, V. M. Chapman, and Y. Hayashizaki. 1996. Inactive allele-specific methylation and chromatin structure of the imprinted gene U2af1-rs1 on mouse chromosome 11. Genomics 35:248-252.
39. Soares, M. B., E. Schon, A. Henderson, S. K. Karathanasis, R. Cate, S. Zeitlin, J. Chirgwin, and A. Efstratiadis. 1985. RNA-mediated gene duplication: the rat preproinsulin I gene is a functional retroposon. Mol. Cell. Biol. 5:2090-2103.
40. Solter, D. 1988. Differential imprinting and expression of maternal and paternal genomes. Annu. Rev. Genet. 22:127-146.
41. Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
42. Stoger, R., P. Kubicka, C. G. Liu, T. Kafri, A. Razin, H. Cedar, and D. P. Barlow. 1993. Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinting signal. Cell 73:61-71.
43. Strauss, W. M., E. Jaenisch, and R. Jaenisch. 1992. A strategy for rapid production and screening of yeast artificial chromosome libraries. Mammal. Genome 1:150-157.
44. Sutcliffe, J. S., M. Nakao, S. Christian, K. H. Orstavik, N. Tommerup, D. H. Ledbetter, and A. L. Beaudet. 1994. Deletions of a differentially methylated CpG island at the SNRPN gene define a putative imprinting control region. Nat. Genet. 8:52-58.
45. Swain, J. L., T. A. Stewart, and P. Leder. 1987. Parental legacy determines methylation and expression of an autosomal transgene: a molecular mechanism for parental imprinting. Cell 50:719-727.
46. Tremblay, K. D., J. R. Saam, R. S. Ingram, S. M. Tilghman, and M. S. Bartolomei. 1995. A paternal-specific methylation imprint marks the alleles of the mouse H19 gene. Nat. Genet. 9:407-413.
47. Yamaoka, T., I. Hatada, K. Kitagawa, X. Wang, and T. Mukai. 1995. Cloning and mapping of the U2af1-rs2 gene with a high transmission distortion in interspecific backcross progeny. Genomics 27:337-340.
48. Zemel, S., M. S. Bartolomei, and S. M. Tilghman. 1992. Physical linkage of two mammalian imprinted genes, H19 and insulin-like growth factor 2. Nat. Genet. 2:61-65.
49. Zuccotti, M., and M. Monk. 1995. Methylation of the mouse Xist gene in sperm and eggs correlates with imprinted Xist expression and paternal X-inactivation. Nat. Genet. 9:316-320.