Molecular subtyping of human T-lymphotropic virus type I (HTLV-I) by a nested polymerase chain reaction-restriction fragment length polymorphism analysis of the envelope gene: Two distinct lineages of HTLV-I in Taiwan

Journal of Medical Virology

Volumn 51, Issue 1, 1997, Pages 25-31

  Yang, Ya Chien ^a   Hsu, Tsuey Ying ^a   Liu, Mei Ying ^a   Lin, Ming Tseh ^b   Chen, Jen Yang ^a   Yang, Czau Siung ^a  

^a NATIONAL TAIWAN UNIVERSITY   (Taiwan)

^b NATIONAL TAIWAN UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

env gene; HTLV I subtypes; subtype specific nucleotides

Indexed keywords

ARTICLE; CLINICAL ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; GENETIC POLYMORPHISM; HUMAN; HUMAN T CELL LEUKEMIA VIRUS 1; PHYLOGENY; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TAIWAN; VIRUS STRAIN;

BASE SEQUENCE; DNA, VIRAL; EPIDEMIOLOGY, MOLECULAR; GENES, ENV; HTLV-I INFECTIONS; HUMAN T-LYMPHOTROPIC VIRUS 1; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TAIWAN;

EID: 0031038228     PISSN: 01466615     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1096-9071(199701)51:1<25::AID-JMV4>3.0.CO;2-U     Document Type: Article

References (44)

1. Bastian I, Gardner J, Webb D, Gardner I (1993): Isolation of a human T-lymphotropic virus type I strain from Australian aboriginals. Journal of Virology 7:843-851.
2. Biggar RJ, Saxinger C, Gardiner C, Collins WE, Levine PH, Clark JW, Nkrumah FK, Blattner WA (1984): Type-1 HTLV antibody in urban and rural Ghana, West Africa. International Journal of Cancer 34:215-219.
3. Blattner WA, Kalyanaraman VS, Robert-Guroff M, Lister TA, Galton DAG, Sarin PS, Crawford MH, Catovsky D, Greaves M, Gallo RC (1982): The human type-C retrovirus, in blacks from the Caribbean region and relationship to adult T-cell leukemia/lymphoma. International Journal of Cancer 30:257-264.
4. Chou KS, Okayama A, Tachibana N, Lee TH, Essex M (1995): Nucleotide sequence analysis of a full-length human T-cell leukemia virus type I from adult T-cell leukemia cells: A prematurely terminated pX open reading frame II. International Journal of Cancer 60:701-706.
5. Daenke S, Nightingale S, Cruickshank JK, Bangham CRM (1990): Sequence variants of human T-cell lymphotropic virus type I from patients with tropical spastic paraparesis and adult T-cell leukemia do not distinguish neurological from leukemic isolates. Journal of Virology 64:1278-1282.
6. De Thé G, Gessain A, Gazzolo L, Robert-Guroff M, Najberg G, Calender A, M'Pangi P, Brubaker G, Bensliman A, Fabry F, Strobel M, Robin Y, Fortune R (1985): Comparative seroepidemiology of HTLV-I and HTLV-II in the French West Indies and some African countries. Cancer Research 45:4633s-4636s.
7. Evangelista A, Maroushek S, Minnigan H, Larson A, Retzel E, Haase A, Gonzalez-Dunia D, McFarlin D, Mingioli E, Jacobson S, Osame M, Sonoda S (1990): Nucleotide sequence analysis of a provirus derived from an individual with tropical spastic paraparesis. Microbial Pathogenesis 8:259-278.
8. Evans BK, Gore I, Harrell LE, Arnold T, Oh SJ (1989): HTLV-I-associated myelopathy and polymyositis in a US native. Neurology 39:1572-1575.
9. Gessain A, Barin F, Vernant JC, Gout O, Maurs L, Calender A, De Thé G (1985): Antibodies to human T-lymphotropic virus type-I in patients with tropical spastic paraparesis. Lancet ii:407-410.
10. Gessain A, Yanagihara R, Franchini G, Garruto RM, Jenkins CL, Aidukiewicz AB, Gallo RC, Gajdusek DC (1991): Highly divergent molecular variants of human T-lymphotropic virus type I from isolated populations in Papua New Guinea and the Solomon Islands. Proceedings of the National Academy of the Sciences of the USA 88:7694-7698.
11. Gessain A, Boeri E, Yanagihara R, Gallo RC, Franchini G (1993): Complete nucleotide sequence of a highly divergent human T-cell leukemia (lymphotropic) virus type I (HTLV-I) variant from Melanesia: Genetic and phylogenetic relationship to HTLV-I strains from other geographical regions. Journal of Virology 67:1015-1023.
12. Grav GS, White M, Bartman T, Mann D (1990): Envelope gene sequence of HTLV-1 isolate MT-2 and its comparison with other HTLV-1 isolates. Virology 177:391-395.
13. Green JE, Hinrichs SH, Vogel J, Jay G (1989): Exocrinopathy resembling Sjögren's syndrome in HTLV-I tax transgenic mice. Nature 341:72-74.
14. Hinuma Y, Nagata K, Hanaoka M, Nakai M, Matsumoto T, Kinoshita KI, Shirakawa S, Miyoshi I (1981): Adult T-cell leukemia: Antigen in an ATL cell line and detection of antibodies to the antigen in human sera. Proceedings of the National Academy of Sciences of the USA 78:6476-6480.
15. Hinuma Y, Komoda H, Chosa T, Kondo T, Kohakura M, Takenaka T, Kikuchi M, Ichimaru M, Yunoki K, Sato I, Matsuo R, Takiuchi Y, Uchino H, Hanaoka M (1982): Antibodies to adult T-cell leukemia-virus-associated antigen (ATLA) in sera from patients with ATL and controls in Japan: A nation-wide seroepidemiologic study. International Journal of Cancer 29:631-635.
16. Komurian F, Pelloquin F, De Thé G (1991): In vivo genomic variability of human T-cell leukemia virus type I depends more upon geography than upon pathologies. Journal of Virology 65:3770-3778.
17. Komurian-Pradel F, Pelloquin F, Sonoda S, Osame M, De Thé G (1992): Geographical subtypes demonstrated by RFLP following PCR in the LTR region of HTLV-I. AIDS Research and Human Retroviruses 8:429-434.
18. LaGrenade L, Hanchard B, Fletcher V, Cranston B, Blattner W (1990): Infective dermatitis of Jamaican children: A marker for HTLV-I infection. Lancet 336:1345-1347.
19. Lin MT, Chen YC, Chen PJ, Yang YC, Tang JL, Wu JM, Chuang SE, Yang CS (1996): Envelope gene sequences of human T-lymphotropic virus type I in Taiwan. Archives of Virology 141:219-229.
20. Malik KTA, Even J, Karpas A (1988): Molecular cloning and complete nucleotide sequences of an adult T cell leukaemia virus/human T cell leukaemia virus type I (ATLV/HTLV-I) isolate of Caribbean origin:Relationship to other members of the ATLV/HTLV-I subgroup. Journal of General Virology 69:1695-1710.
21. Manns A, Blattner WA (1991): The epidemiology of the human T-cell lymphotropic virus type I and type II: Etiologic role in human disease. Transfusion 31:67-75.
22. Miura T, Fujunaga T, Igarashi T, Yamashita M, Ido E, Funahashi SI, Ishida T, Washio K, Ueda S, Hashimoto KI, Yoshida M, Osame M, Singhal BS, Zaninovic V, Cartier L, Sonoda S, Tajima K, Ina Y, Gojobori T, Hayami M (1994): Phylogenetic subtypes of human T-lymphotropic virus type I and their relations to the anthropological background. Proceedings of the National Academy of the Sciences of the USA 91:1124-1127.
23. Mochizuki M, Watanabe T, Yamaguchi K, Tajima K, Yoshimura K, Nakashima S, Shirao M, Araki S, Miyata N, Mori S, Takatsuki K (1992): Uveitis associated with human T lymphotropic virus type I: Seroepidemiologic, clinical, and virologie studies. Journal of Infectious Diseases 166:943-944.
24. Mukhopadhyaya R, Sadaie MR (1993): Nucleotide sequence analysis of HTLV-I isolated from cerebrospinal fluid of a patient with TSP/ HAM: Comparison to other HTLV-I isolates. AIDS Research and Human Retroviruses 9:109-114.
25. Nishioka K, Maruyama I, Sato K, Kitajima I, Nakajima Y, Osame M (1989): Chronic inflammatory arthropathy associated with HTLV-I. Lancet i:441.
26. Ono A, Miura T, Araki S, Yamaguchi K, Takatsuki K, Mori S, Hayami M, Mochizuki M, Watanabe T (1994): Subtype analysis of HTLV-I in patients with HTLV-I uveitis. Japanese Journal of Cancer Research 85:767-770.
27. Osame M, Usuku K, Izumo S, Ijichi N, Amitani H, Igata A, Matsumoto M, Tara M (1986): HTLV-I associated myelopathy, a new clinical entity. Lancet i:1031-1032.
28. Paine E, Garcia J, Philpott TC, Shaw G, Ratner L (1991): Limited sequence variation in human T-lymphotropic virus type I isolates from North American and African patients. Virology 182:111-123.
29. Poiesz BJ, Ruscetti RW, Gazdar AF, Bunn BA, Minna JD, Gallo RC (1980): Detection and isolation of the C retrovirus from fresh and cultured lymphocytes of a patient with T cell lymphoma. Proceedings of the National Academy of the Sciences of the USA 77:7415-7419.
30. Ralston S, Hoeprich P, Akita R (1989): Identification and synthesis of the epitopes for a human monoclonal antibody which can neutralize human T-cell leukemia/lymphotropic virus type I. Journal of Biological Chemistry 264:16343-16346.
31. Ratner L, Philpott T, Trowbridge DB (1991): Nucleotide sequence analysis of isolates of human T-lymphotropic virus type 1 of diverse geographical origins. AIDS Research and Human Retroviruses 7:923-941.
32. Renjifo B, Borrero I, Essex M (1995): Tax mutation associated with tropical spastic paraparesis/human T-cell leukemia virus type I-associated myelopathy. Journal of Virology 69:2166-2616.
33. Seiki M, Hattori S, Hirayama Y, Yoshida M (1983): Human adult T-cell leukemia virus: Complete nucleotide sequence of the provirus genome integrated in leukemia cell DNA. Proceedings of the National Academy of the Sciences of the USA 80:3618-3622.
34. Su IJ, Chan HL, Kuo TT, Eimoto T, Maeda Y, Kikuchi M, Kuam YZ, Shih LY, Chen MJ, Takeshita M (1985): Adult T-cell leukemia/ lymphoma in Taiwan: A clinicopathologic observation. Cancer 56:2217-2220.
35. Tanaka Y, Zeng L, Shiraki H, Shida H, Tozawa H (1991): Identification of a neutralization epitope on the envelope gp46 antigen of human T cell leukemia virus type I and induction of neutralizing antibody by peptide immunization. Journal of Immunology 147:354-360.
36. Tsujimoto A, Teruuchi T, Imamura J, Shimotohno K, Miyoshi I, Miwa M (1988): Nucleotide sequence analysis of a provirus derived from HTLV-I associated myelopathy (HAM). Molecular Biological Medicine 5:29-42.
37. Ureta Vidal A, Gessain A, Yoshida M, Mahieux R, Nishioka K, Tekaia F, Rosen L, De Thé G (1994a): Molecular epidemiology of HTLV type I in Japan: Evidence for two distinct ancestral lineages with a particular geographical distribution. AIDS Research and Human Retroviruses 10:1557-1566.
38. Ureta Vidal A, Gessain A, Yoshida M, Tekaia F, Garin B, Guillemain B, Schulz T, Fand R, De Thé G (1994b): Phylogenetic classification of human T cell leukaemia/lymphoma virus type I genotypes in five major molecular and geographical subtypes. Journal of General Virology 75:3655-3666.
39. Usuku K, Sonoda S, Osame M, Yashiki S, Takahashi K, Matsumoto M, Sawada T, Tsuji K, Tara M, Igata A (1988): HLA haplotype-linked high immune responsiveness against HTLV-I in HTLV-I-associated myelopathy: Comparison with adult T-cell leukemia/ lymphoma. Annals of Neurology 23(Suppl):s143-150.
40. Wang CH, Chen CJ, Hu CY, You SL, Chu CT, Chou MJ, Essex M, Blattner WA, Liu CH, Yang CS (1988): Seroepidemiology of human T-cell lymphotropic virus type I infection in Taiwan. Cancer Research 48:5042-5044.
41. Yanagihara R, Nerurkar VR, Garruto RM, Miller MA, Leon-Monzon ME, Jenkins CL, Sanders RC, Liberski PP, Alpers MP, Gajdusek DC (1991): Characterization of a variant of human T lymphotropic virus type I isolated from a healthy member of a remote, recently contacted group in Papua New Guinea. Proceedings of the National Academy of the Sciences of the USA 88:1446-1450.
42. Yang YC, Hsu TY, Wang CH, Su IJ, Chen JY, Yang CS (1991): Human T-lymphotropic virus type I genome in adult T-cell leukemia/ lymphoma. Chinese Journal of Microbiology and Immunology 24:84-94.
43. Yang YC, Hung TP, Wang CH, Lin MT, Hsu TY, Chen JY, Chen YC, Yang CS (1993): Establishment and characterization of an HTLV-I cell line from a Taiwanese patient with HTLV-I-associated myelopathy. Journal of the Neurological Sciences 120:46-53.
44. Yoshida M, Miyoshi I, Hinuma Y (1982): Isolation and characterization of retrovirus from cell lines of human adult T-cell leukemia and its implication in the disease. Proceedings of the National Academy of the Sciences of the USA 79:2031-2035.