A model for Fis N-terminus and Fis-invertase recognition

FEBS Letters

Volumn 401, Issue 1, 1997, Pages 1-5

  Tzou, Wen Shyong ^a   Hwang, Ming Jing ^b  

^a NATIONAL DEFENSE MEDICAL CENTER   (Taiwan)

^b INSTITUTE OF BIOMEDICAL SCIENCES   (Taiwan)

Author keywords

Fis; Homology modeling; Invertase; Structure predicition

Indexed keywords

BETA FRUCTOFURANOSIDASE;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; DELETION MUTANT; DNA BINDING; ENZYME ANALYSIS; ENZYME CONFORMATION; MOLECULAR MODEL; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; BETA-FRUCTOFURANOSIDASE; CARRIER PROTEINS; FACTOR FOR INVERSION STIMULATION PROTEIN; GLYCOSIDE HYDROLASES; INTEGRATION HOST FACTORS; MOLECULAR SEQUENCE DATA; MUTAGENESIS; PROTEIN BINDING;

EID: 0031034276     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(96)01348-8     Document Type: Article

References (32)

1. Heichman, K.A. and Johnson, R.C. (1990) Science 249, 511-517.
2. Johnson, R.C. and Simon, M.I. (1985) Cell 41, 781-791.
3. Kahmann, R., Rudt, F., Koch, C. and Mertens, G (1985) Cell 41, 771-780.
4. Koch, C., Ninnemann, O., Fuss, H. and Kahmann, R. (1991) Nucleic Acids Res. 19, 5915-5922.
5. Osuna, R., Finkel, S.E. and Johnson, R.C. (1991) EMBO J. 10, 1593-1603.
6. Finkel, S.E. and Johnson, R.C. (1992) Mol. Microbiol. 6, 3257-3265.
7. Van de Putte, P. and Goosen, N. (1992) Trends Genet. 8, 457-462.
8. Kostrewa, D., Granzin, J., Koch, C., Choe, H.-W., Raghunathan, S., Wolf, W., Labahn, J., Kahmann, R. and Saenger, W. (1991) Nature 349, 178-181.
9. Kostrewa, D., Granzin, J., Stock, D., Choe, H.-W., Labahn, J. and Saenger, W. (1992) J. Mol. Biol. 226, 209-226.
10. Yuan, S.H., Finkel, S.E., Feng, J.-A., Kaczor-Grzeskowiak, M., Johnson, R.C. and Dickerson, R.E. (1991) Proc. Natl. Acad. Sci. USA 88, 9558-9562.
11. Yuan, S.H., Wang, S.S., Yang, W.-Z., Finkel, S.E. and Johnson, R.C. (1994) J. Biol. Chem. 269, 28947-28954.
12. Hwang, M.J. and Tzou, W.S. (1996) Prog. Biophys. Mol. Biol. 65 (Suppl. 1), 139 (Abstract no. P-D1-04, XIIth International Biophysics Congress, 11-16 August 1996, Amsterdam, The Netherlands).
13. Bernstein, F.C., Koetzle, T.F., Williams, G.J.B., Meyer, E.F., Jr., Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T. and Tasumi, M. (1977) J. Mol. Biol. 112, 535-542 (April 1994 Release).
14. Brenner, S.E. (1995) Trends Genet. 11, 330-331.
15. Rost, B. (1995) in: The 3rd International Conference on Intelligent Systems for Molecular Biology (ISMB) (Rawlings, C., Clark, D., Altman, R., Hunter, L., Lengauer, T. and Wodak, S. eds.) pp. 314-321, AAAI, Menlo Park, CA.
16. Rost, B. and Sander, C. (1994) Proteins 19, 55-77.
17. Rost, B. and Sander, C. (1994) Proteins 20, 216-226.
18. Mas, M.T., Smith, D.C., Yarmush, D.L., Aisaka, K. and Fine, R.M. (1992) Proteins 14, 483-498.
19. Maple, J.R., Hwang, M.-J., Stockfisch, T.P., Dinur, U., Waldman, M., Ewig, C.S. and Hagler, A.T. (1994) J. Comput. Chem. 15, 162-182.
20. Hwang, M.-J., Stockfisch, T.P. and Hagler, A.T. (1994) J. Am. Chem. Soc. 116, 2515-2525.
21. Koch, C., Vandekerckhove, J. and Kahmann, R. (1988) Proc. Natl. Acad. Sci. USA 85, 4237-4241.
22. Milner-White, E.J., Ross, B.M., Ismail, R., Belhadj-Mostefa, K. and Poet, R. (1988) J. Mol. Biol. 204, 777-782.
23. Leszczynski, J.F. and Rose, G.D. (1986) Science 234, 849-855.
24. Martin, A.C.R., Toda, K., Stirk, H.J. and Thornton, J.M. (1995) Protein Eng. 8, 1093-1101.
25. Haykinson, M.J., Johnson, L.M., Soong, J. and Johnson, R.C. (1996) Curr. Biol. 6, 163-177.
26. Sanderson, M.R., Freemont, P.S., Rice, P.A., Goldman, A., Hatfull, G.F., Grindley, N.D.F. and Steitz, T.A. (1990) Cell 63, 1323-1329.
27. Rice, P.A. and Steitz, T.A. (1994) Structure 2, 371-384.
28. Haffter, P. and Bickle, T.A. (1988) EMBO J. 7, 3991-3996.
29. Klippel, A., Cloppenborg, K. and Kahmann, R. (1988) EMBO J. 7, 3983-3989.
30. Klippel, A., Kanaar, R., Kahmann, R. and Cozzarelli, N.R. (1988) EMBO J. 12, 1047-1057.
31. Spaeny-Dekking, L., Schlicher, E., Franken, K., Van de Putte, P. and Goosen, N. (1995) J. Bacteriol. 177, 222-228.
32. Yang, W. and Steitz, T.A. (1995) Cell 82, 193-207.