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Volumn 143, Issue 1, 1997, Pages 101-107

xyIUW, two genes at the start of the upper pathway operon of TOL plasmid pWW0, appear to play no essential part in determining its catabolic phenotype

Author keywords

Pseudomonas putida strain mt 2; TOL plasmid pWW0; Toluene xylene catabolism; xyl genes

Indexed keywords

ALCOHOL DEHYDROGENASE; BACTERIAL PROTEIN; BENZALDEHYDE; BENZYL ALCOHOL; BENZYLAMINE; MANDELIC ACID; NICOTINAMIDE ADENINE DINUCLEOTIDE; OXIDOREDUCTASE; TOLUENE;

EID: 0031024264     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-143-1-101     Document Type: Article
Times cited : (25)

References (34)
  • 1
    • 0025005226 scopus 로고
    • The TOL plasmids -determinants of the catabolism of toluene and the xylenes
    • Assinder, S. J. & Williams, P. A. (1990). The TOL plasmids -determinants of the catabolism of toluene and the xylenes. Adv Microb Physiol 31, 1-69.
    • (1990) Adv Microb Physiol , vol.31 , pp. 1-69
    • Assinder, S.J.1    Williams, P.A.2
  • 2
    • 0028799572 scopus 로고
    • Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PKO1
    • Byrne, A. M., Kukor, J. J. & Olsen, R. H. (1995). Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PKO1. Gene 154, 65-70.
    • (1995) Gene , vol.154 , pp. 65-70
    • Byrne, A.M.1    Kukor, J.J.2    Olsen, R.H.3
  • 3
    • 0028793102 scopus 로고
    • Functional analysis of Escherichia coli threonine dehydrogenase by means of mutant isolation and characterization
    • Chen, Y. W., Dekker, E. E. & Somerville, R. L. (1995). Functional analysis of Escherichia coli threonine dehydrogenase by means of mutant isolation and characterization. Biochim Biophys Acta 1253, 208-214.
    • (1995) Biochim Biophys Acta , vol.1253 , pp. 208-214
    • Chen, Y.W.1    Dekker, E.E.2    Somerville, R.L.3
  • 4
    • 0028358260 scopus 로고
    • Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn5-derived and Tn10-derived minitransposons
    • De Lorenzo, V. & Timmis, K. N. (1994). Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn5-derived and Tn10-derived minitransposons. Methods Enzymol 235, 386-405.
    • (1994) Methods Enzymol , vol.235 , pp. 386-405
    • De Lorenzo, V.1    Timmis, K.N.2
  • 5
    • 0025195680 scopus 로고
    • Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in Gram-negative eubacteria
    • De Lorenzo, V., Herrero, M., Jakubzik, U. & Timmis, K. N. (1990). Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in Gram-negative eubacteria. J Bacteriol 172, 6568-6572.
    • (1990) J Bacteriol , vol.172 , pp. 6568-6572
    • De Lorenzo, V.1    Herrero, M.2    Jakubzik, U.3    Timmis, K.N.4
  • 6
    • 0025847512 scopus 로고
    • L-Threonine dehydrogenase from Escherichia coli - Identification of an active-site cysteine residue and metal-ion studies
    • Epperly, B. R. & Dekker, E. E. (1991). L-Threonine dehydrogenase from Escherichia coli - identification of an active-site cysteine residue and metal-ion studies. J Biol Chem 266, 6086-6092.
    • (1991) J Biol Chem , vol.266 , pp. 6086-6092
    • Epperly, B.R.1    Dekker, E.E.2
  • 7
    • 0026766452 scopus 로고
    • Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multi-component polychlorinated biphenyl-degrading enzyme in Pseudomonas strain LB400
    • Erickson, B. D. & Mondello, F. J. (1992). Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multi-component polychlorinated biphenyl-degrading enzyme in Pseudomonas strain LB400. J Bacteriol 174, 2903-2912.
    • (1992) J Bacteriol , vol.174 , pp. 2903-2912
    • Erickson, B.D.1    Mondello, F.J.2
  • 8
    • 0025318026 scopus 로고
    • The meta-cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes
    • Harayama, S. & Rekik, M. (1990). The meta-cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes. Mol Gen Genet 221, 113-120.
    • (1990) Mol Gen Genet , vol.221 , pp. 113-120
    • Harayama, S.1    Rekik, M.2
  • 9
    • 0022450932 scopus 로고
    • Gene order of the TOL catabolic plasmid upper pathway operon and oxidation of both toluene and benzyl alcohol by the xylA product
    • Harayama, S., Leppik, R. A., Rekik, M., Mermod, N., Lehrbach, P. R., Reineke, W. & Timmis, K. N. (1986). Gene order of the TOL catabolic plasmid upper pathway operon and oxidation of both toluene and benzyl alcohol by the xylA product. J Bacteriol 167, 455-461.
    • (1986) J Bacteriol , vol.167 , pp. 455-461
    • Harayama, S.1    Leppik, R.A.2    Rekik, M.3    Mermod, N.4    Lehrbach, P.R.5    Reineke, W.6    Timmis, K.N.7
  • 10
    • 0024328134 scopus 로고
    • Characterization of five genes in the upper pathway operon of TOL plasmid pWW0 from Pseudomonas putida and identification of the gene products
    • Harayama, S., Rekik, M., Wubbolts, M., Rose, K., Leppik, R. A. & Timmis, K. N. (1989). Characterization of five genes in the upper pathway operon of TOL plasmid pWW0 from Pseudomonas putida and identification of the gene products. J Bacteriol 171, 5048-5055.
    • (1989) J Bacteriol , vol.171 , pp. 5048-5055
    • Harayama, S.1    Rekik, M.2    Wubbolts, M.3    Rose, K.4    Leppik, R.A.5    Timmis, K.N.6
  • 11
    • 0025047590 scopus 로고
    • Transposon vectors containing non-antibiotic markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria
    • Herrero, M., de Lorenzo, V. & Timmis, K. N. (1990). Transposon vectors containing non-antibiotic markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria. J Bacteriol 172, 6557-6567.
    • (1990) J Bacteriol , vol.172 , pp. 6557-6567
    • Herrero, M.1    De Lorenzo, V.2    Timmis, K.N.3
  • 12
    • 0028958160 scopus 로고
    • Overlapping substrate specificities of benzaldehyde dehydrogenase (the xylC gene product) and 2-hydroxymuconic semialdehyde dehydrogenase (the xylG gene product) encoded by TOL plasmid pWW0 of Pseudomonas putida
    • Inoue, J., Shaw, J. P., Rekik, M. & Harayama, S. (1995). Overlapping substrate specificities of benzaldehyde dehydrogenase (the xylC gene product) and 2-hydroxymuconic semialdehyde dehydrogenase (the xylG gene product) encoded by TOL plasmid pWW0 of Pseudomonas putida. J Bacteriol 177, 1196-1201.
    • (1995) J Bacteriol , vol.177 , pp. 1196-1201
    • Inoue, J.1    Shaw, J.P.2    Rekik, M.3    Harayama, S.4
  • 13
    • 0019456994 scopus 로고
    • Molecular cloning of TOL gene xylB and gene xylE in Escherichia coli
    • Inouye, S., Nakazawa, A. & Nakazawa, T. (1981). Molecular cloning of TOL gene xylB and gene xylE in Escherichia coli. J Bacteriol 145, 1137-1143.
    • (1981) J Bacteriol , vol.145 , pp. 1137-1143
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 14
    • 0020520053 scopus 로고
    • Molecular cloning of regulatory gene xylR and operator-promoter regions of the xylABC and xylDEGF operons of the TOL plasmid
    • Inouye, S., Nakazawa, A. & Nakazawa, T. (1983). Molecular cloning of regulatory gene xylR and operator-promoter regions of the xylABC and xylDEGF operons of the TOL plasmid. J Bacteriol 155, 1192-1199.
    • (1983) J Bacteriol , vol.155 , pp. 1192-1199
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 15
    • 0021279852 scopus 로고
    • Nucleotide sequence surrounding transcription initiation site of xylABC operon on TOL plasmid of Pseudomonas putida
    • Inouye, S., Ebina, Y., Nakazawa, A. & Nakazawa, T. (1984). Nucleotide sequence surrounding transcription initiation site of xylABC operon on TOL plasmid of Pseudomonas putida. Proc Natl Acad Sci USA 81, 1688-1691.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 1688-1691
    • Inouye, S.1    Ebina, Y.2    Nakazawa, A.3    Nakazawa, T.4
  • 16
    • 0025675633 scopus 로고
    • Upstream regulatory sequence for transcriptional activator xylR in the first operon of xylene metabolism on the TOL plasmid
    • Inouye, S., Gomada, M., Sangodkar, U. M. X., Nakazawa, A. & Nakazawa, T. (1990). Upstream regulatory sequence for transcriptional activator xylR in the first operon of xylene metabolism on the TOL plasmid. J Mol Biol 216, 251-260.
    • (1990) J Mol Biol , vol.216 , pp. 251-260
    • Inouye, S.1    Gomada, M.2    Sangodkar, U.M.X.3    Nakazawa, A.4    Nakazawa, T.5
  • 17
    • 0025837193 scopus 로고
    • A wide host-range suicide vector for improving reverse genetics in Gram-negative bacteria - Inactivation of the blaA gene of Yersinia enterocolitica
    • Kaniga, K., Delor, I. & Cornelis, G. R. (1991). A wide host-range suicide vector for improving reverse genetics in Gram-negative bacteria - inactivation of the blaA gene of Yersinia enterocolitica. Gene 109, 137-141.
    • (1991) Gene , vol.109 , pp. 137-141
    • Kaniga, K.1    Delor, I.2    Cornelis, G.R.3
  • 18
    • 0023195872 scopus 로고
    • Molecular analysis of regulatory and structural xyl genes of the TOL plasmid pWW53-4
    • Keil H., Keil, S. & Williams, P. A. (1987). Molecular analysis of regulatory and structural xyl genes of the TOL plasmid pWW53-4. J Gen Microbiol 133, 1149-1158.
    • (1987) J Gen Microbiol , vol.133 , pp. 1149-1158
    • Keil, H.1    Keil, S.2    Williams, P.A.3
  • 19
    • 0019486545 scopus 로고
    • Catabolism of pseudocumene and 3-ethyltoluene by Pseudomonas putida (arvilla) mt-2 -evidence for new functions of the TOL (pWW0) plasmid
    • Kunz, D. A. & Chapman, P. J. (1981). Catabolism of pseudocumene and 3-ethyltoluene by Pseudomonas putida (arvilla) mt-2 -evidence for new functions of the TOL (pWW0) plasmid. J Bacteriol 146, 179-191.
    • (1981) J Bacteriol , vol.146 , pp. 179-191
    • Kunz, D.A.1    Chapman, P.J.2
  • 20
    • 0022342921 scopus 로고
    • Complementation of deletion and insertion mutants of TOL plasmid pWW0-regulatory implications and location of xylC gene
    • Lebens, M. R. & Williams, P. A. (1985). Complementation of deletion and insertion mutants of TOL plasmid pWW0-regulatory implications and location of xylC gene. J Gen Microbiol 131, 3261-3269.
    • (1985) J Gen Microbiol , vol.131 , pp. 3261-3269
    • Lebens, M.R.1    Williams, P.A.2
  • 21
    • 0023892552 scopus 로고
    • A novel suicide vector and its use in construction of insertion mutations - Osmoregulation of outer-membrane proteins and virulence determinants in Vibrio cholerae requires toxR
    • Miller, V. L. & Mekalanos, J. J. (1988). A novel suicide vector and its use in construction of insertion mutations - osmoregulation of outer-membrane proteins and virulence determinants in Vibrio cholerae requires toxR. J Bacteriol 170, 2575-2583.
    • (1988) J Bacteriol , vol.170 , pp. 2575-2583
    • Miller, V.L.1    Mekalanos, J.J.2
  • 22
    • 0015521998 scopus 로고
    • The metabolism of benzoate and methylbenzoates via the meta-cleavage pathway by Pseudomonas arvilla mt-2
    • Murray, K., Duggleby, C. J., Sala-Trepat, J. M. & Williams, P. A. (1972). The metabolism of benzoate and methylbenzoates via the meta-cleavage pathway by Pseudomonas arvilla mt-2. Eur J Biochem 28, 301-310.
    • (1972) Eur J Biochem , vol.28 , pp. 301-310
    • Murray, K.1    Duggleby, C.J.2    Sala-Trepat, J.M.3    Williams, P.A.4
  • 23
    • 0025134997 scopus 로고
    • Genetic analysis of chromosomal operons involved in degradation of aromatic hydrocarbons on Pseudomonas putida TMB
    • Polissi, A., Bestetti, G., Bertoni, G., Galli, E. & Deho, G. (1990). Genetic analysis of chromosomal operons involved in degradation of aromatic hydrocarbons on Pseudomonas putida TMB. J Bacteriol 172, 6355-6362.
    • (1990) J Bacteriol , vol.172 , pp. 6355-6362
    • Polissi, A.1    Bestetti, G.2    Bertoni, G.3    Galli, E.4    Deho, G.5
  • 24
    • 0028212644 scopus 로고
    • Molecular characterization of microbial alcohol dehydrogenases
    • Reid, M. F. & Fewson, C. A. (1994). Molecular characterization of microbial alcohol dehydrogenases. Crit Rev Microbiol 20, 13-56.
    • (1994) Crit Rev Microbiol , vol.20 , pp. 13-56
    • Reid, M.F.1    Fewson, C.A.2
  • 25
    • 0024990842 scopus 로고
    • Purification and characterization of TOL plasmid-encoded benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase of Pseudomonas putida
    • Shaw, J. P. & Harayama, S. (1990). Purification and characterization of TOL plasmid-encoded benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase of Pseudomonas putida. Eur J Biochem 191, 705-714.
    • (1990) Eur J Biochem , vol.191 , pp. 705-714
    • Shaw, J.P.1    Harayama, S.2
  • 26
    • 0028954595 scopus 로고
    • Characterization in vitro of the hydroxylase component of xylene monooxygenase, the first enzyme of the TOL plasmid-encoded pathway for the mineralization of toluene and xylenes
    • Shaw, J. P. & Harayama, S. (1995). Characterization in vitro of the hydroxylase component of xylene monooxygenase, the first enzyme of the TOL plasmid-encoded pathway for the mineralization of toluene and xylenes. J Ferment Bioeng 79, 195-199.
    • (1995) J Ferment Bioeng , vol.79 , pp. 195-199
    • Shaw, J.P.1    Harayama, S.2
  • 27
    • 0027178329 scopus 로고
    • Kinetic studies on benzyl alcohol dehydrogenase encoded by TOL plasmid pWW0 - A member of the zinc-containing long-chain alcohol-dehydrogenase family
    • Shaw, J. P., Rekik, M., Schwager, F. & Harayama, S. (1993). Kinetic studies on benzyl alcohol dehydrogenase encoded by TOL plasmid pWW0 - a member of the zinc-containing long-chain alcohol-dehydrogenase family. J Biol Chem 268, 10842-10850.
    • (1993) J Biol Chem , vol.268 , pp. 10842-10850
    • Shaw, J.P.1    Rekik, M.2    Schwager, F.3    Harayama, S.4
  • 28
    • 0025963052 scopus 로고
    • Primary structure of xylene monooxygenase - Similarities to and differences from the alkane hydroxylation system
    • Suzuki, M., Hayakawa, T., Shaw, J. P., Rekik, M. & Harayama, S. (1991). Primary structure of xylene monooxygenase - similarities to and differences from the alkane hydroxylation system. J Bacteriol 173, 1690-1695.
    • (1991) J Bacteriol , vol.173 , pp. 1690-1695
    • Suzuki, M.1    Hayakawa, T.2    Shaw, J.P.3    Rekik, M.4    Harayama, S.5
  • 29
    • 0026640186 scopus 로고
    • Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707
    • Taira, K., Hirose, J., Hayashida, S. & Furukawa, K. (1992). Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707. J Biol Chem 267, 4844-4853.
    • (1992) J Biol Chem , vol.267 , pp. 4844-4853
    • Taira, K.1    Hirose, J.2    Hayashida, S.3    Furukawa, K.4
  • 30
    • 0020442864 scopus 로고
    • The pUC plasmids, an m13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers
    • Vieira, J. & Messing, J. (1982). The pUC plasmids, an m13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19, 259-268.
    • (1982) Gene , vol.19 , pp. 259-268
    • Vieira, J.1    Messing, J.2
  • 31
    • 0028924094 scopus 로고
    • Identification of a membrane protein and truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1
    • Wang, Y., Rawlings, M., Gibson, D. T., Labbe, D., Bergeron, H., Brousseau, R. & Lau, P. C. K. (1995). Identification of a membrane protein and truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1. Mol Gen Genet 246, 570-579.
    • (1995) Mol Gen Genet , vol.246 , pp. 570-579
    • Wang, Y.1    Rawlings, M.2    Gibson, D.T.3    Labbe, D.4    Bergeron, H.5    Brousseau, R.6    Lau, P.C.K.7
  • 32
    • 0019720906 scopus 로고
    • Rapid methods for the study of both stable and unstable plasmids in Pseudomonas
    • Wheatcroft, R. & Williams, P. A. (1981). Rapid methods for the study of both stable and unstable plasmids in Pseudomonas. J Gen Microbiol 124, 433-437.
    • (1981) J Gen Microbiol , vol.124 , pp. 433-437
    • Wheatcroft, R.1    Williams, P.A.2
  • 33
    • 0016197816 scopus 로고
    • Metabolism of benzoate and the methylbenzoates by Pseudomonas arvilla mt-2: Evidence for the existence of a TOL plasmid
    • Williams, P. A. & Murray, K. (1974). Metabolism of benzoate and the methylbenzoates by Pseudomonas arvilla mt-2: evidence for the existence of a TOL plasmid. J Bacteriol 120, 416-423.
    • (1974) J Bacteriol , vol.120 , pp. 416-423
    • Williams, P.A.1    Murray, K.2
  • 34
    • 0016593935 scopus 로고
    • Metabolism of toluene and xylenes by Pseudomonas putida (arvilla) mt-2: Evidence for a new function of the TOL plasmid
    • Worsey, M. J. & Williams, P. A. (1975). Metabolism of toluene and xylenes by Pseudomonas putida (arvilla) mt-2: evidence for a new function of the TOL plasmid. J Bacteriol 124, 7-13.
    • (1975) J Bacteriol , vol.124 , pp. 7-13
    • Worsey, M.J.1    Williams, P.A.2


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