The nucleotide sequence and predicted secondary structure of small subunit (18S) ribosomal RNA from Spirometra erinaceieuropaei

Gene

Volumn 184, Issue 2, 1997, Pages 221-227

  Liu, Dian Wu ^a   Kato, Hisaharu ^a   Sugane, Kazuo ^a  

^a SHINSHU UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

Phylogeny

Indexed keywords

NUCLEOTIDE; RNA 18S;

ARTICLE; CESTODE; COMPUTER ANALYSIS; CONTROLLED STUDY; ECHINOCOCCUS; EUKARYOTE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PREDICTION; PRIORITY JOURNAL; RNA SEQUENCE; RNA STRUCTURE;

ANIMALS; BASE SEQUENCE; EVOLUTION; GENES, HELMINTH; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PHYLOGENY; RNA, HELMINTH; RNA, RIBOSOMAL, 18S; SEQUENCE ALIGNMENT; SPIROMETRA;

EID: 0031022860     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(96)00599-9     Document Type: Article

References (24)

1. Chi, J.G., Chi, H.S. and Lee, S.H. (1980) Histopathological study on human sparganosis in Korea. Korean J. Parasitol. 18, 15-23.
2. Dams, E., Hendriks, L., Van de Peer, Y., Neefs, J.-M., Smits, G., Vandenbempt, I. and De Wachter, R. (1988) Compilation of small ribosomal subunit RNA sequences. Nucleic Acids Res. 16s, r87-r173.
3. Elwood, H.J., Olsen, G.J. and Sogin, M.L. (1985) The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata. Mol. Biol. Evol. 2, 399-410.
4. Field, K.G., Olsen, G.J., Lane, D.R., Giovannoni, S.J., Ghiselin, M.T., Raff, E.C., Pace, N.R. and Raff, R.A. (1988) Molecular phylogeny of the animal kingdom. Science 239, 748-753.
5. Fung, C.F., Ng, T.H. and Wong, W.T. (1989) Sparganosis of the spinal cord. Case report. J. Neurosurg. 71, 290-302.
6. Gerbi, S.A. (1985) Evolution of ribosomal DNA. In: MacIntyre, R.J. (Ed.), Evolution of Ribosomal RNA. Plenum, New York, NY, pp. 419-517.
7. Holodniy, M., Almonoff, J., Loutit, J. and Steinberg, G.K. (1991) Cerebral sparganosis: case report and review. Rev. Infect. Dis. 13, 155-159.
8. Johnson, A.M., Illana, S., Hakendorf, P. and Baverstock, P.R. (1988) Phylogenetic relationships of the apicomplexan protist Sarcocystis as determined by small subunit ribosomal RNA comparison. J. Parasitol. 74, 847-860.
9. Johnston, D.J., Kane, R.A. and Rollinson, D. (1993) Small subunit (18S) ribosomal RNA gene divergence in the genus Schistosoma. Parasitology 107, 147-156.
10. Korbsrisate, S., Mongkolsuk, S., Haynes, J.R., England, D. and Sirisinha, S. (1991) Nucleotide sequence of the small subunit ribosomal RNA-encoding gene from Opisthorchis viverrini. Gene 105, 259-261.
11. Matsuura, T., Bylund, G. and Sugane, K. (1992) Comparison of restriction fragment length polymorphisms of ribosomal DNA between Diphyllobothrium nihonkaiense and D. latum. J. Helminthol. 66, 261-266.
12. McCarroll, R., Olsen, G.J., Stahl, Y.D., Woese, C.R. and Sogin, M.L. (1983) Nucleotide sequence of the Dictyostelium discoideum small-subunit ribosomal ribonucleic acid inferred from the gene sequence: evolutionary implications. Biochemistry 22, 5858-5868.
13. McCutchan, T.F., De la Cruz, V.F., Lal, A.A., Gunderson, J.H., Elwood, H.J. and Sogin, M.L. (1988) Primary sequences of two small subunit ribosomal RNA genes from Plasmodium falciparum. Mol. Biochem. Parasitol. 28, 63-68.
14. Neefs, J.-M., Van de Peer, Y., Hendriks, L. and De Wachter, R. (1990) Compilation of small ribosomal subunit RNA sequences. Nucleic Acids Res. 18, 2237-2317.
15. Neefs, J.-M., Van de Peer, Y., Rijk, P.D., Goris, A. and Wachter, R. (1991) Compilation of small ribosomal subunit RNA sequences. Nucleic Acids Res. 19s, 1987-2015.
16. Omer Ali, P., Simpson, A.J.G., Allen, R., Waters, A.P., Humphries, C. J., Johnston, D.A. and Rollinson, D. (1991) Sequence of a small subunit rRNA gene of Schistosoma mansoni and its use in phylogenetic analysis. Mol. Biochem. Parasitol. 46, 201-208.
17. Putland, R.A., Thomas, S.M., Grove, D.I. and Johnson, A.M. (1993) Analysis of the 18 S ribosomal RNA gene of Strongyloides stercoralis. Int. J. Parasitol. 23, 149-151.
18. Qu, L.H., Hardman, N., Gill, L., Chappell, L., Nicoloso, M. and Bachellerie, J.P. (1986) Phytogeny of helminths determined by rRNA sequence comparison. Mol. Biochem. Parasitol. 20, 93-99.
19. Saito, I. and Stark, G.R. (1986) Charomid: cosmid vectors for efficient cloning and mapping of large or small restriction fragments. Proc. Natl. Acad. Sci. USA 83, 8664-8668.
20. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning. A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
21. Sanger, F., Nicklen, S. and Coulson, A.K. (1977) DNA sequencing with chain-terminating inhibitor. Proc. Natl. Acad. Sci. USA 74, 5463-5467.
22. Sarma, D.P. and Weilbaecher, T.G. (1986) Human sparganosis. J. Am. Acad. Dermatol. 15, 1145-1148.
23. Zarlenga, D.S., Lichtenfels, J.R. and Stringfellow, F. (1994a) Cloning and sequence analysis of the small subunit ribsomal RNA gene from Nematodirus battus. J. Parasitol. 80, 342-344.
24. Zarlenga, D.S., Stringfellow, F., Nobary, M. and Lichtenfels, J.R. (1994b) Cloning and characterization of ribosomal RNA genes from three species of Haemonchus (Nematoda: Trichostrongyloidea) and identification of PCR primers for rapid differentiation. Exp. Parasitol. 78, 28-36.