A new genus of the order Actinomycetales, Spirilliplanes gen. nov., with description of Spirilliplanes yamanashiensis sp. nov.

International Journal of Systematic Bacteriology

Volumn 47, Issue 1, 1997, Pages 97-102

  Tamura, Tomohiko ^a   Hayakawa, Masayuki ^b   Hatano, Kazunori ^a  

^a Institute for Fermentation Osaka   (Japan)

^b UNIVERSITY OF YAMANASHI   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; RNA 16S; SINGLE STRANDED DNA;

ACTINOBACTERIA; ARTICLE; BACTERIAL GROWTH; BACTERIUM CULTURE; BACTERIUM ISOLATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SOIL; SPECIES DIFFERENTIATION;

ACTINOBACTERIA (CLASS); ACTINOMYCETALES; BACTERIA (MICROORGANISMS); MICROMONOSPORACEAE; SPIRILLIPLANES; SPIRILLIPLANES YAMANASHIENSIS; UNCULTURED ACTINOMYCETE;

EID: 0031022624     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-47-1-97     Document Type: Article

References (28)

1. Albersheim, P., D. J. Nevins, P. D. English, and A. Kerr. 1967. A method for the analysis of sugars in plant-cell polysaccharides by gas-liquid chromatography. Carbohydr. Res. 5:340-345.
2. Asano, K., and I. Kawamoto. 1986. Catellatospora, a new genus of the Actinomycetales. Int. J. Syst. Bacteriol. 36:512-517.
3. Brosius, J., J. L. Palmer, J. P. Kennedy, and H. F. Noller. 1978. Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc. Natl. Acad. Sci. USA 75:4801-4805.
4. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
5. Goodfellow, M., L. J. Stanton, K. E. Simpson, and D. E. Minnikin. 1990. Numerical and chemical classification of Actinoplanes and some related actinomycetes. J. Gen. Microbiol. 136:19-36.
6. Hasegawa, T. 1988. Actinokineospora: a new genus of the Actinomycetales. Actinomycetologica 2:31-45.
7. Hasegawa, T., M. P. Lechevalier, and H. A. Lechevalier. 1978. New genus of the Actinomycetales: Actinosynnema gen. nov. Int. J. Syst. Bacteriol. 28:304-310.
8. Hayakawa, M., and H. Nonomura. 1987. Humic acid-vitamin agar, a new medium for selective isolation of soil actinomycetes. J. Ferment. Technol. 65:501-509.
9. Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
10. Koch, C., R. M. Kroppenstedt, F. A. Rainey, and E. Stackebrandt. 1996. 16S ribosomal DNA analysis of the genera Micromonospora, Actinoplanes, Catellatospora, Catenuloplanes, Couchioplanes, Dactylosporangium, and Pilimelia and emendation of the family Micromonosporaceae. Int. J. Syst. Bacteriol. 46:765-768.
11. Kroppenstedt, R. M. 1985. Fatty acid and menaquinone analysis of actinomycetes and related organisms, p. 173-199. In M. Goodfellow and D. E. Minnikin (ed.), Chemical methods in bacterial systematics, Academic Press, Ltd., London, United Kingdom.
12. Labeda, D. P., R. T. Testa, M. P. Lechevalier, and H. A. Lechevalier. 1985. Glycomyces, a new genus of the Actinomycetales. Int. J. Syst. Bacteriol. 35:417-421.
13. Lechevalier, M. P., C. DeBievre, and H. A. Lechevalier. 1977. Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem. Syst. Ecol. 5:249-260.
14. Lechevalier, M. P., and H. A. Lechevalier. 1970. Chemical composition as a criterion in the classification of aerobic actinomycetes. Int. J. Syst. Bacteriol. 20:435-443.
15. Lechevalier, M. P., H. A. Lechevalier, and P. E. Holbert. 1968. Sporichthya, un nouveau genre de Streptomycetaceae. Ann. Inst. Pasteur (Paris) 114:277-286.
16. Leonard, G. D., W. M. Kuehl, and J. F. Battey. 1994. Plasmid DNA "Miniprep," p. 245-248. In Basic methods in molecular biology, 2nd ed. Appleton & Lange, Norwalk, Conn.
17. Maitra, S. K., and C. E. Ballou. 1977. Heterogeneity and refined structures of 3-O-methyl-D-mannose polysaccharides from Mycobacterium smegmatis. J. Biol. Chem. 252:2459-2469.
18. Nonomura, H., and Y. Ohara. 1969. Distribution of actinomycetes in soil. VI. A culture method effective for both preferential isolation of Microbispora and Streptosporangium strains in soil (part 1). J. Ferment. Technol. 47:463-469.
19. Pernodet, J.-L., F. Borccard, M.-T. Alegre, J. Gargnat, and M. Guérineau. 1989. Organization and nucleotide sequence analysis of ribosomal RNA gene cluster from Streptomyces ambofaciens. Gene 79:33-46.
20. Rayner, R. W. 1970. A mycological colour chart. Commonwealth Mycological Institute, Kew, Surrey & British Mycological Society, Kew, Surrey, United Kingdom.
21. Saiki, R. K., D. H. Gelfand, S. Stoffe, S. J. Scharf, R. Higuchi, G. T. Horn, K. B. Mullis, and A. Erlich. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239:487-491.
22. Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
23. Schleifer, K. H., and O. Kandler. 1972. Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol. Rev. 36:407-477.
24. Shirling, E. B., and D. Gottlieb. 1966. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16:313-340.
25. Tamura, T., Y. Nakagaito, T. Nishii, T. Hasegawa, E. Stackebrandt, and A. Yokota. 1994. A new genus of the order Actinomycetales, Couchioplanes gen. nov., with descriptions of Couchioplanes caeruleus (Horan and Brodsky 1986) comb. nov. and Couchioplanes caeruleus subsp. azureus subsp. nov. Int. J. Syst. Bacteriol. 44:193-203.
26. Vieira, J., and J. Messing. 1987. Production of single-stranded plasmid DNA. Methods Enzymol. 153D:3-11.
27. Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
28. Yokota, A., T. Tamura, T. Hasegawa, and L. H. Huang. 1993. Catenuloplanes japonicus gen. nov., sp. nov., nom. rev., a new genus of the order Actinomycetales. Int. J. Syst. Bacteriol. 43:805-812.