Specific detection of Phytophthora nicotianae using the polymerase chain reaction and primers based on the DNA sequence of its elicitin gene ParA1

European Journal of Plant Pathology

Volumn 103, Issue 1, 1997, Pages 73-83

  Lacourt, I ^a   Duncan, J M ^a  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

diagnostics; oomycetes; parasiticein; PCR; phytopathogenic fungus; zoospores

Indexed keywords

EID: 0031019850     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1008634222146     Document Type: Article

References (37)

1. Ali-Shtayeh MS, MacDonald JD and Kabashima J (1991) A method for using commercial ELISA tests to detect zoospores of Phytophthora and Pythium in irrigated water. Plant Disease 75: 305-311
2. Bruce KD, Hiorns WD, Hobman JL, Osborn AM, Strike P and Ritchie DA (1992) Amplification of DNA from native population of soil bacteria by using the Polymerase Chain Reaction. Applied and Environmental Microbiology 58: 3413-3416
3. Cahill DM and Hardham AR (1994a) A dipstick immunoassay for the specific detection of Phytophthora cinnamomi in soils. Phytopathology 84: 1284-1292
4. Cahill DM and Hardham AR (1994b) Exploitation of zoospores taxis in the development of a novel dipstick immunoassay for the specific detection of Phytophthora cinnamomi. Phytopathology 84: 193-200
5. Devergne JC, Fort MA, Bonnet P, Ricci P, Vergnet C, Delaunay T and Grosclaude J (1994) Immunodetection of elicitins from Phytophthora spp. using monoclonal antibodies. Plant Pathology 43: 885-896
6. Edwards K, Johnstone C and Thompson C (1991) A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Research 19: 1349
7. Ersek T, Schoelz JE and English JT (1994) PCR amplification of species-specific DNA sequence can distinguish among Phytophthora species. Applied and Enviromental Microbiology 60: 2616-2621
8. Goodwin PH, English JT, Neher DA, Duniway JM and Kirkpartrick BC (1990) Detection of Phytophthora parasitica from soil and host tissue with a species-specific DNA probe. Phytopathology 80: 277-281
9. Hall R, Zentmeyer GA and Erwin DC (1969) Approach to the taxonomy of Phytophthora through acrylamide gel electrophoresis of proteins. Phytopathology 59: 770-774
10. Hauswirth WW, Dickel CD and Lawlor DA (1994) DNA analysis of the windover population. In: Herrmann B and Hummel S (eds) Ancient DNA. Recovery and Analysis of Genetic Material from Paleontological Archeological, Museum, Medical and Forensic Specimens (pp. 104-121) Springer-Verlag, New York USA
11. Hickman CJ (1958) Phytophthora plant destroyer. Transactions of the British Mycological Society 41: 1-13
12. Ho HH and Jong SC (1989) Phytophthora nicotianae (P. parasitica). Mycotaxon 35: 243-276
13. Huet JC, Le Caer JP, Nespoulos C and Pernollet JC (1995) The relationships between the toxicity and the primary and secondary structures of elicitin-like protein elicitor secreted by the phytopathogenic fungus Pythium vexans. Molecular Plant-Microbe Interaction 8: 302-310
14. Hummel S and Herrmann B (1994) General aspects of sample preparation. In: Herrmann B and Hummel S (eds) Ancient DNA. Recovery and Analysis of Genetic Material from Paleontological Archeological, Museum, Medical and Forensic Specimens (pp. 59-68) Springer-Verlag, New York USA
15. Jones K and Shew HD (1988) Immunoassay procedure for the detection of Phytophthora nicotianae var nicotianae in soil (abstr.). Phytopathology 78: 1577
16. Kamoun S, Klucher KM, Coffey MA and Tyler (1993) A gene encoding a host-specific elicitor protein of Phytophthora nicotianae. Molecular Plant-Microbe Interactions 6: 573-581
17. Lacourt I (1994) Etude de la spécialisation parasitaire de Phytophthora parasitica Dastur par l'analyse d'une population d'isolats d'origines géographiques diverses. Thèse de Doctorat, Université Claude Bernard of Lyon
18. Lacourt I, Panabières F, Marais A, Venard P and Ricci P (1994) Intraspecific polymorphism of the fungus Phytophthora parasitica revealed by the analysis of mitochondrial DNA Restriction Fragment Length Polymorphism. Mycological Research 9: 562-568
19. Le Berre J-Y, Panabières F, Ponchet M, Denoroy L, Bonnet P, Marais A and Ricci P (1994) Occurence of multiple forms of elicitin in Phytophthora cryptogea. Plant Physiology and Biochemistry 32: 1-5
20. Lee SB and Taylor JW (1992) Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Journal of Molecular and Biological Evolution 9: 636-653
21. McDonald JD, Stites J and Kabashima J (1990) Comparison of serological and culture plate methods for detecting species of Phytophthora, Pythium and Rhizoctonia in ornamental plants. Plant Disease 74: 655-659
22. MacDonald JD, Ali-Shtaeyh MS, Kabashima J and Stiles J (1994) Occurence of Phytophthora species in recirculated nursery irrigation effluents. Plant Disease 78: 607-611
23. MacManus PS and Jones AL (1995) Detection of Erwinia carotova by nested PCR and PCR-dol-blot and reverse-blol hybridisations. Phytopathology 85: 618-623
24. Miller SM, Petersen FP, Miller SA, Rittembourg JH, Wood SC and Grothaus GD (1989) Development of a direct immunoassay to detect Phytophthora megasperma in soil, (abstr.) Phytopathology 79: 1139
25. Nespoulos C, Huet JC and Pernollet JC (1992) Structure-function relationships of a and b elicitins, signal proteins involved in the plant-Phytophthora interaction. Planta 186: 551-557
26. Panabières F, Marais A, Le Berre JY, Fournier D, Penot I and Ricci P (1995) Characterization of a gene cluster of Phytophthora cryptogea which encodes for elicitins, proteins inducing a hypersensitive-like response in tobacco. Molecular Plant-Microbe Interactions 8: 996-1003
27. Picard C, Ponsonnet C, Paget E, Nesme X and Simonet P (1992) Detection and enumeration of bacteria in soil by direct DNA extraction and Polymerase Chain Reaction. Applied and Environmental Microbiology 58: 2717-2722
28. Ricci P, Bonnet P, Huet JC, Sallantin M, Beauvais-Cante F, Bruneteau M, Billard V, Michel G and Pernollet JC (1989) Structure and activity of proteins from pathogenic fungi Phytophthora eliciting necrosis and acquired resistance in tobacco. European Journal of Biochemistry 183: 555-563
29. Ricci P, Trentin F, Bonnet P, Venard P, Mouton-Perronnet F and Bruneteau M (1992) Differential production of parasiticein, an elicitor of necrosis and resistance in tobacco, by isolates of Phytophthora parasitica. Plant Pathology 41: 298-307
30. Ricci P, Panabières F, Bonnet, Maia N, Ponchet M, Devergne JC, Marais A, Cardin L, Milat ML and Blein JP (1993) Proteinaceous elicitors of plant defense responses. In: Fritig B and Legrand M (eds) Mechanisms of Plant Defense Response (pp. 136-139) Kluwer Academic Publishers, The Netherlands
31. Sambrook J, Fritsch EF and Maniatis T (1989) Molecular Cloning, a Laboratory Manual. Second Edition. Nolan C and Ferguson M (eds) Cold Spring, Harbor Laboratory Press
32. Stamps DJ, Waterhouse GM, Newhook FJ and Hall GS (eds) (1990) Revised tabular key to the species of Phytophthora. Mycological Paper No 162, 28 pp. C.A.B. International Mycological Institute
33. Toranzos GA and Alvarez AJ (1992) Solid-phase polymerase Chain Reaction: Application for direct detection of enteric pathogens in water. Canadian Journal of Microbiology 38: 365-369
34. Tsao PH (1983) Factors affecting isolation and quantitation of Phytophthora from soil. In: Erwin DC, Bartnicky-Garcia S and Tsao PH (eds) Phytophthora, Its Biology, Taxonomy, Ecology and Pathology (pp. 219-236) American Phytopathological Society, St Paul, Minnesota
35. Tucker CM (1931) taxonomy of the genus Phytophthora de Bary. Missouri agricultural Experiment station Research Bulletin 153: 1-208
36. White TJ, Bruns T, Lee S and Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: A Guide to Methods and Applications (pp. 315-321) Academic Press Inc. New York
37. Yu LM (1995) Elicitins from Phytophthora and basic resistance in tobacco. Proceedings of National Academy of Sciences 92: 4088-4094