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Volumn 186, Issue 2, 1997, Pages 181-188

Characterization of the rat carbonic anhydrase II gene structure: Sequence analysis of the 5' flanking region and 3' UTR

Author keywords

5' flanking sequence; CpG island; Polyadenylation signals; Recombinant DNA; Splice junctions; Tissue expression

Indexed keywords

BETA GLOBIN; CARBONATE DEHYDRATASE II; CIS ACTING ELEMENT; DNA; MESSENGER RNA;

EID: 0031019080     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(96)00700-7     Document Type: Article
Times cited : (5)

References (38)
  • 1
    • 0017367397 scopus 로고
    • Screening λgt recombinant clones by hybridization to single plaques in situ
    • Benton, W.D. and Davis, R.W. (1977) Screening λgt recombinant clones by hybridization to single plaques in situ. Science 196, 180-182.
    • (1977) Science , vol.196 , pp. 180-182
    • Benton, W.D.1    Davis, R.W.2
  • 2
    • 0022540321 scopus 로고
    • CpG-rich islands and the function of DNA methylation
    • Bird, A.P. (1986) CpG-rich islands and the function of DNA methylation. Nature 321, 209-213.
    • (1986) Nature , vol.321 , pp. 209-213
    • Bird, A.P.1
  • 3
    • 0022366770 scopus 로고
    • Transcription termination and 3′ processing: The end is in site!
    • Birnstiel, M.L., Busslinger, M. and Strub, K. (1985) Transcription termination and 3′ processing: the end is in site! Cell 41, 349-359.
    • (1985) Cell , vol.41 , pp. 349-359
    • Birnstiel, M.L.1    Busslinger, M.2    Strub, K.3
  • 4
    • 0021943866 scopus 로고
    • Supercoil sequencing: A fast and simple method for sequencing plasmid DNA
    • Chen, E.Y. and Seeburg, P.H. (1985) Supercoil sequencing: a fast and simple method for sequencing plasmid DNA. DNA 4, 165-170.
    • (1985) DNA , vol.4 , pp. 165-170
    • Chen, E.Y.1    Seeburg, P.H.2
  • 5
    • 0018639079 scopus 로고
    • Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease
    • Chirgwin, J.M., Przybyla, A.E., MacDonald, R.J. and Rutter, W.J. (1979) Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18, 5294-5301.
    • (1979) Biochemistry , vol.18 , pp. 5294-5301
    • Chirgwin, J.M.1    Przybyla, A.E.2    MacDonald, R.J.3    Rutter, W.J.4
  • 6
    • 0021042438 scopus 로고
    • The nucleotide sequence and derived amino acid sequence of cDNA coding for mouse carbonic anhydrase II
    • Curtis, P.J., Withers, E., Demuth, D., Watt, R., Venta, P.J. and Tashian, R.E. (1983) The nucleotide sequence and derived amino acid sequence of cDNA coding for mouse carbonic anhydrase II. Gene 25, 325-332.
    • (1983) Gene , vol.25 , pp. 325-332
    • Curtis, P.J.1    Withers, E.2    Demuth, D.3    Watt, R.4    Venta, P.J.5    Tashian, R.E.6
  • 7
    • 0020724929 scopus 로고
    • Three regions upstream from the cap site are required for efficient and accurate transcription of the rabbit β-globin gene in mouse 3T6 cells
    • Dierks, P., van Ooyen, A., Cochran, M.D., Dobkin, C., Reiser, J. and Weissmann, C. (1983) Three regions upstream from the cap site are required for efficient and accurate transcription of the rabbit β-globin gene in mouse 3T6 cells. Cell 32, 695-706.
    • (1983) Cell , vol.32 , pp. 695-706
    • Dierks, P.1    Van Ooyen, A.2    Cochran, M.D.3    Dobkin, C.4    Reiser, J.5    Weissmann, C.6
  • 8
    • 0025259389 scopus 로고
    • Structure and expression of mammalian carbonic anhydrases
    • Edwards, Y. (1990) Structure and expression of mammalian carbonic anhydrases. Biochem. Soc. Trans. 18, 171-175.
    • (1990) Biochem. Soc. Trans. , vol.18 , pp. 171-175
    • Edwards, Y.1
  • 9
    • 0027367599 scopus 로고
    • Characterization of the genes encoding carbonic anhydrase I of chimpanzee and gorilla: Comparative analysis of 5′ flanking erythroid-specific promoter sequences
    • Epperly, B.R., Bergenhem, N.C.H., Venta, P.J. and Tashian, R.E. (1993) Characterization of the genes encoding carbonic anhydrase I of chimpanzee and gorilla: comparative analysis of 5′ flanking erythroid-specific promoter sequences. Gene 131, 249-253.
    • (1993) Gene , vol.131 , pp. 249-253
    • Epperly, B.R.1    Bergenhem, N.C.H.2    Venta, P.J.3    Tashian, R.E.4
  • 10
    • 0029186955 scopus 로고
    • Expression of carbonic anhydrase II (CA II) promoter-reporter fusion genes in multiple tissues of transgenic mice does not replicate normal patterns of expression indicating complexity of CA II regulation in vivo
    • Erickson, R.P., Grimes, J., Venta, P.J. and Tashian, R.E. (1995) Expression of carbonic anhydrase II (CA II) promoter-reporter fusion genes in multiple tissues of transgenic mice does not replicate normal patterns of expression indicating complexity of CA II regulation in vivo. Biochem. Genet. 33, 421-437.
    • (1995) Biochem. Genet. , vol.33 , pp. 421-437
    • Erickson, R.P.1    Grimes, J.2    Venta, P.J.3    Tashian, R.E.4
  • 11
    • 0024345773 scopus 로고
    • The mouse carbonic anydrase I gene contains two tissue-specific promoters
    • Fraser, P., Cummings, P. and Curtis, P. (1989) The mouse carbonic anydrase I gene contains two tissue-specific promoters. Mol. Cell. Biol. 9, 3308-3313.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 3308-3313
    • Fraser, P.1    Cummings, P.2    Curtis, P.3
  • 12
    • 0028906537 scopus 로고
    • Characterization of the gene encoding carbonic anhydrase I from the pigtail macaque
    • Hopkins, P.J., Bergenhem, N.C.H., Venta, P.J., Hewett-Emmett, D. and Tashian, R.E. (1995) Characterization of the gene encoding carbonic anhydrase I from the pigtail macaque. Gene 152, 265-269.
    • (1995) Gene , vol.152 , pp. 265-269
    • Hopkins, P.J.1    Bergenhem, N.C.H.2    Venta, P.J.3    Hewett-Emmett, D.4    Tashian, R.E.5
  • 13
    • 0021166139 scopus 로고
    • Carbonic anhydrase II isoenzyme in rat liver is under hormonal control
    • Jeffery, S., Carter, N.D. and Wilson, C. (1984) Carbonic anhydrase II isoenzyme in rat liver is under hormonal control. Biochem. J. 221, 927-929.
    • (1984) Biochem. J. , vol.221 , pp. 927-929
    • Jeffery, S.1    Carter, N.D.2    Wilson, C.3
  • 14
    • 0025153506 scopus 로고
    • Hormonal manipulation and neonatal imprinting of carbonic anhydrase isozymes in rat liver
    • Jeffery, S., Wilson, C.A. and Carter, N.D. (1990) Hormonal manipulation and neonatal imprinting of carbonic anhydrase isozymes in rat liver. Horm. Metab. Res. 22, 467-469.
    • (1990) Horm. Metab. Res. , vol.22 , pp. 467-469
    • Jeffery, S.1    Wilson, C.A.2    Carter, N.D.3
  • 15
    • 0023393468 scopus 로고
    • Human muscle carbonic anhydrase: Gene structure and DNA methylation patterns in fetal and adult tissues
    • Lloyd, J., Brownson, C., Tweedie, S., Charlton, J. and Edwards, Y.H. (1987) Human muscle carbonic anhydrase: gene structure and DNA methylation patterns in fetal and adult tissues. Genes Dev. 1, 594-602.
    • (1987) Genes Dev. , vol.1 , pp. 594-602
    • Lloyd, J.1    Brownson, C.2    Tweedie, S.3    Charlton, J.4    Edwards, Y.H.5
  • 16
    • 0025133128 scopus 로고
    • Structure and methylation patterns of the gene encoding human carbonic anhydrase I
    • Lowe, N., Brady, H.J., Barlow, J.H., Sowden, J.C., Edwards, M. and Butterworth, P.H.W. (1990) Structure and methylation patterns of the gene encoding human carbonic anhydrase I. Gene 93, 277-283.
    • (1990) Gene , vol.93 , pp. 277-283
    • Lowe, N.1    Brady, H.J.2    Barlow, J.H.3    Sowden, J.C.4    Edwards, M.5    Butterworth, P.H.W.6
  • 17
    • 0027513276 scopus 로고
    • Characterization of the mouse carbonic anhydrase II gene promoter
    • Marino, L.R. (1993) Characterization of the mouse carbonic anhydrase II gene promoter. J. Biol. Chem. 268, 7081-7089.
    • (1993) J. Biol. Chem. , vol.268 , pp. 7081-7089
    • Marino, L.R.1
  • 18
    • 0026342073 scopus 로고
    • Characterization of the human gene for a newly discovered carbonic anhydrase, Ca VII, and its localization to chromosome 16
    • Montgomery, J.C., Venta, P.J., Eddy, R.L., Fukushima, Y.S., Shows, T.B. and Tashian, R.E. (1991) Characterization of the human gene for a newly discovered carbonic anhydrase, CA VII, and its localization to chromosome 16. Genomics 11, 835-848.
    • (1991) Genomics , vol.11 , pp. 835-848
    • Montgomery, J.C.1    Venta, P.J.2    Eddy, R.L.3    Fukushima, Y.S.4    Shows, T.B.5    Tashian, R.E.6
  • 19
    • 0020050314 scopus 로고
    • A catalogue of splice junction sequences
    • Mount, S.M. (1982) A catalogue of splice junction sequences. Nucleic Acids. Res. 10, 459-472.
    • (1982) Nucleic Acids. Res. , vol.10 , pp. 459-472
    • Mount, S.M.1
  • 20
    • 0023461268 scopus 로고
    • Specific synthesis of DNa in vitro via a polymerase-catalyzed chain reaction
    • Mullis, K.B. and Faloona, F.A. (1987) Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 155, 335-350.
    • (1987) Methods Enzymol. , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.A.2
  • 21
    • 0023429459 scopus 로고
    • Cloning, expression, and sequence homologies of cDNA for human carbonic anhydrase II
    • Murakami, H., Marelich, G.P., Grubb, J.H., Kyle, J.W. and Sly, W.S. (1987) Cloning, expression, and sequence homologies of cDNA for human carbonic anhydrase II. Genomics 1, 159-166.
    • (1987) Genomics , vol.1 , pp. 159-166
    • Murakami, H.1    Marelich, G.P.2    Grubb, J.H.3    Kyle, J.W.4    Sly, W.S.5
  • 22
    • 0029165164 scopus 로고
    • Genomic organization of the human gene (CA5) and pseudogene for mitochondrial carbonic anhydrase V and their localization to chromosomes 16q and 16p
    • Nagao, Y., Batanian, J.R., Clemente, M.F. and Sly, W.S. (1995) Genomic organization of the human gene (CA5) and pseudogene for mitochondrial carbonic anhydrase V and their localization to chromosomes 16q and 16p. Genomics 28, 477-484.
    • (1995) Genomics , vol.28 , pp. 477-484
    • Nagao, Y.1    Batanian, J.R.2    Clemente, M.F.3    Sly, W.S.4
  • 23
    • 0027308711 scopus 로고
    • Genomic organization and localization of gene for human carbonic anhydrase IV to chromosome 17q
    • Okuyama, T., Batanian, J.R. and Sly, W.S. (1993) Genomic organization and localization of gene for human carbonic anhydrase IV to chromosome 17q. Genomics 16, 678-684.
    • (1993) Genomics , vol.16 , pp. 678-684
    • Okuyama, T.1    Batanian, J.R.2    Sly, W.S.3
  • 24
    • 0024100723 scopus 로고
    • The role of the mammalian branch-point sequence in pre-mRNA splicing
    • Reed, R. and Maniatis, T. (1988) The role of the mammalian branch-point sequence in pre-mRNA splicing. Genes Dev. 2, 1268-1276.
    • (1988) Genes Dev. , vol.2 , pp. 1268-1276
    • Reed, R.1    Maniatis, T.2
  • 25
    • 0017375464 scopus 로고
    • Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I
    • Rigby, P.W.J., Dieckman, M., Rhodes, C. and Berg, P. (1977) Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J. Mol. Biol. 113, 237-251.
    • (1977) J. Mol. Biol. , vol.113 , pp. 237-251
    • Rigby, P.W.J.1    Dieckman, M.2    Rhodes, C.3    Berg, P.4
  • 27
    • 0017681196 scopus 로고
    • DNA sequencing with chain-terminating inhibitors
    • USA
    • Sanger, F., Nicklen, S. and Coulson, A.R. (1977) DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467.
    • (1977) Proc. Natl. Acad. Sci. , vol.74 , pp. 5463-5467
    • Sanger, F.1    Nicklen, S.2    Coulson, A.R.3
  • 28
    • 0023493898 scopus 로고
    • Molecular analysis of G + C-rich upstream sequences regulating transcription of the human carbonic anhydrase II gene
    • Shapiro, L.H., Venta, P.J. and Tashian, R.E. (1987) Molecular analysis of G + C-rich upstream sequences regulating transcription of the human carbonic anhydrase II gene. Mol. Cell. Biol. 7, 4589-4593.
    • (1987) Mol. Cell. Biol. , vol.7 , pp. 4589-4593
    • Shapiro, L.H.1    Venta, P.J.2    Tashian, R.E.3
  • 29
    • 0029057703 scopus 로고
    • Human carbonic anhydrases and carbonic anhydrase deficiencies
    • Sly, W.S. and Hu, P.Y. (1995) Human carbonic anhydrases and carbonic anhydrase deficiencies. Annu. Rev. Biochem. 64, 375-401.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 375-401
    • Sly, W.S.1    Hu, P.Y.2
  • 30
    • 0024470631 scopus 로고
    • Scanning from an independently specified branch point defines the 3′ splice site of mammalian introns
    • Smith, C.W.J., Porro, E.B., Patton, J.G. and Nadal-Ginard, B. (1989) Scanning from an independently specified branch point defines the 3′ splice site of mammalian introns. Nature 342, 243-247.
    • (1989) Nature , vol.342 , pp. 243-247
    • Smith, C.W.J.1    Porro, E.B.2    Patton, J.G.3    Nadal-Ginard, B.4
  • 31
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern, E.M. (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98, 503-517.
    • (1975) J. Mol. Biol. , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 32
    • 0026353423 scopus 로고
    • Nucleotide sequence of a cDNa encoding rat brain carbonic anydrase II and its deduced amino acid sequence
    • Stolle, C.A., McGowan, M.H., Heim, R.A., Varia, M. and Neubauer, J.A. (1991) Nucleotide sequence of a cDNA encoding rat brain carbonic anydrase II and its deduced amino acid sequence. Gene 109, 265-267.
    • (1991) Gene , vol.109 , pp. 265-267
    • Stolle, C.A.1    McGowan, M.H.2    Heim, R.A.3    Varia, M.4    Neubauer, J.A.5
  • 33
    • 0024688008 scopus 로고
    • The carbonic anhydrases: Widening perspectives on their evolution, expression, and function
    • Tashian, R.E. (1989) The carbonic anhydrases: widening perspectives on their evolution, expression, and function. Bioessays 10, 186-192.
    • (1989) Bioessays , vol.10 , pp. 186-192
    • Tashian, R.E.1
  • 34
    • 0026619849 scopus 로고
    • Genetics of the mammalian carbonic anhydrases
    • Tashian, R.E. (1992) Genetics of the mammalian carbonic anhydrases. Adv. Genet. 30, 321-356.
    • (1992) Adv. Genet. , vol.30 , pp. 321-356
    • Tashian, R.E.1
  • 35
    • 0022428627 scopus 로고
    • Comparison of the 5′ regions of human and mouse carbonic anhydrase II genes and identification of possible regulatory elements
    • Venta, P.J., Montgomery, J.C., Hewett-Emmett, D. and Tashian, R.E. (1985a) Comparison of the 5′ regions of human and mouse carbonic anhydrase II genes and identification of possible regulatory elements. Biochim. Biophys. Acta 826, 195-201.
    • (1985) Biochim. Biophys. Acta , vol.826 , pp. 195-201
    • Venta, P.J.1    Montgomery, J.C.2    Hewett-Emmett, D.3    Tashian, R.E.4
  • 36
    • 0022414404 scopus 로고
    • Structure and exon to protein domain relationships of the mouse carbonic anhydrase II gene
    • Venta, P.J., Montgomery, J.C., Hewett-Emmett, D., Wiebauer, K. and Tashian, R.E. (1985b) Structure and exon to protein domain relationships of the mouse carbonic anhydrase II gene. J. Biol. Chem. 260, 12130-12135.
    • (1985) J. Biol. Chem. , vol.260 , pp. 12130-12135
    • Venta, P.J.1    Montgomery, J.C.2    Hewett-Emmett, D.3    Wiebauer, K.4    Tashian, R.E.5
  • 37
    • 0025944564 scopus 로고
    • Carbonic anhydrase II deficiency syndrome in a Belgian family is caused by a point mutation at an invariant histidine residue (107 His-Tyr): Complete structure of the normal human Ca II gene
    • Venta, P.J., Welty, R.J., Johnson, T.M., Sly, W.S. and Tashian, R.E. (1991) Carbonic anhydrase II deficiency syndrome in a Belgian family is caused by a point mutation at an invariant histidine residue (107 His-Tyr): Complete structure of the normal human CA II gene. Am. J. Hum. Genet. 49, 1082-1090.
    • (1991) Am. J. Hum. Genet. , vol.49 , pp. 1082-1090
    • Venta, P.J.1    Welty, R.J.2    Johnson, T.M.3    Sly, W.S.4    Tashian, R.E.5
  • 38
    • 0023142642 scopus 로고
    • The chicken carbonic anhydrase II gene: Evidence for a recent shift in intron position
    • Yoshihara, C.M., Lee, J.D. and Dodgson, J.B. (1987) The chicken carbonic anhydrase II gene: evidence for a recent shift in intron position. Nucleic Acids Res. 15, 753-770.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 753-770
    • Yoshihara, C.M.1    Lee, J.D.2    Dodgson, J.B.3


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