Polymorphisms in the TNF gene cluster and MHC serotypes in the West of Scotland

Immunogenetics

Volumn 45, Issue 3, 1997, Pages 188-194

  Gallagher, Grant ^a   Eskdale, Joyce ^a   Oh, Hui Hui ^a   Richards, Susan D ^a   Campbell, David A ^a,b   Field, Max ^a  

^a UNIVERSITY OF GLASGOW   (United Kingdom)

^b ST JAMES S UNIVERSITY HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2; MICROSATELLITE DNA; TUMOR NECROSIS FACTOR;

ARTICLE; DNA POLYMORPHISM; GENE CLUSTER; HAPLOTYPE; HUMAN; IMMUNOGENETICS; NORMAL HUMAN; POPULATION GENETICS; PRIORITY JOURNAL; SEROTYPE; UNITED KINGDOM;

COHORT STUDIES; GENES, MHC CLASS I; GENES, MHC CLASS II; GENOTYPE; HUMANS; LYMPHOTOXIN-ALPHA; MAJOR HISTOCOMPATIBILITY COMPLEX; MICROSATELLITE REPEATS; MULTIGENE FAMILY; POLYMORPHISM, GENETIC; SCOTLAND; TUMOR NECROSIS FACTOR-ALPHA;

EID: 0031019044     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002510050188     Document Type: Article

References (31)

1. Abraham, L. J., Du, D. C., Zahedi, K., Dawkins, R. L., and Whitehead, A. S. Haplotypic polymorphism of the TNFB gene. Immunogenetics 33: 50-53, 1991
2. Abraham, L. J., Grimsley, G., Zhang, W. J., Degli-Esposti, M. A., and Dawkins, A. L. Polymorphism in the human B144 gene in difficult MHC haplotypes. Eur J Immunogenet 19: 165-169, 1993a
3. Abraham, L. J., Marley, J. V., Nedospasov, S. A., Cambon-Thomsen, A., Crouau-Roy, B., Dawkins, R. L., and Giphart, M. J. Microsatellite, restriction fragment-length polymorphism and sequence-specific oligonucleotide typing of the tumour necrosis factor region; comparisons of the 4AOHW cell panel. Hum Immunol 38: 17-23, 1993b
4. Abraham, L. J., French, M. A. H., and Dawkins, R. L. Polymorphic MHC ancestral haplotypes affect the activity of tumour necrosis factor-alpha. Clin Expl Immunol 92: 14-18, 1993c
5. Browning, J. L., Ngam-Ek, A., Lawton, P., DeMarinis, J., Tizard, R., Chow, E. P., Hession, C., O'Brine-Greco, B., Foley, S. F. and Ware, C. F. Lymphotoxin-β; a novel member of the TNF family that forms a heteromeric complex with lymphotoxin on the cell surface. Cell 72: 847-856, 1993
6. Carroll, M. C., Katman, P., Alicot, E. M., Koller, B. H., Geraghty, D. E., Orr, H. T., Strominger, J. L., and Spies, T. Linkage map of the human major histocompatibility complex including the tumour necrosis factor genes. Proc Natl Acad Sci USA 84: 8535-8539, 1987
7. Crouau-Roy, B., Briant, L., Bouison, C., Stavropoulos, C., and Pociot, F. Tumour necrosis factor polymorphisms in four European populations. Hum Immunol 38: 213-216, 1993
8. D'Alphonso, S. and Momigliano-Richiardi, P. A polymorphic variation in a putative regulation box of the TNFA promoter region. Immunogenetics 39: 150-154, 1994
9. De Baey, A., Holzinger, I., Scholz, S., Keller, E., Weiss, E. H., and Albert, E. Pvu-II polymorphism in the primate homologue of the mouse B144 (LST-1): a novel gene marker within the tumour necrosis factor region. Hum Immunol 42: 9-14, 1995
10. Dawkins, R. L., Leaver, A., Cameron, P. U., Martin, E., Kay, P. H., and Christiansen, F. T. Some disease-associated ancestral haplotypes carry a polymorphism of TNF. Hum Immunol 26: 91-97, 1989
11. Degli-Esposti, M. A., Leaver, A. L., Christiansen, F. T. Witt, C. S., Abraham, L. J., and Dawkins, R. L. Ancestral haplotypes: conserved population MHC haplotypes. Hum Immunol 38: 242-252, 1992
12. Degli-Esposti, M. A., Leelayuwat, C., Daly, L. N., Carcassi, C., Contu, L., Versluis, L. F., Tilanus, M. G. J., and Dawkins, R. L. Updated characterisation of the fourth ancestral haplotypes using Asia-Oceania histocompatibility workshop panel. Hum Immunol 44: 12-18, 1995
13. Ferencik, S., Lindemann, M., Horsthemke, B., and Grosse-Wilde, H. A new restriction fragment length polymorphism of the human TNF-β gene detected by AspH1 digest. Eur J Immunogen 19: 425-430, 1992
14. Fleury, S., Thibodeau, J., Croteau, G., Labrecque, Aronson, H.-E., Cantin, C., Long, E. O., and Sékaly, R.-P. HLA-DR polymorphism affects the interaction with CD4. J Expl Med 182: 733-741, 1995
15. Holzinger, I., de Baey, A., Messer, G., Kick, G., Zwierzina, H., and Weiss, E. H. Cloning and genomic characterization of LSTI: a new gene in the human TNF region. Immunogenetics 42: 315-322, 1995
16. Honchel, R., McDonnell, S., Schaid, D. J., and Thibodeau, S. N. Tumour necrosis factor-alpha allelic frequency and chromosome 6 imblance in patients with colorectal cancer. Canc Res 56: 145-149, 1996
17. Jacob, C. O., Fronek, Z., Lewis, G. D., Koo, M., Hansen, J. A., and McDevitt, H. O. Heritable major histocompatibility class II-associated differences in production of tumour necrosis factor-alpha: relevance to genetic predisposition to systemic lupus erythematosus. Proc Natl Acad Sci USA 87: 1233-1237, 1990
18. Jongeneel, C. V., Briant, L., Udalova, I. A., Sevin, A., Nedospasov, S. A., and Cambon-Thomsen. A. Extensive genetic polymorphism in the human tumour necrosis factor region and relation to extended HLA haplotypes. Proc Natl Acad Sci USA 88: 9717-9721, 1991
19. McGuire, W., Hill, A. V. S., Allsop, C. E. M., Greenwood, B. M., and Kwiatkowski, D. Variation in the TNF promoter region associated with susceptibility to cerebral malaria. Nature 371: 508-511, 1994
20. Messer, G., Sprengler, U., Jung, M. C., Honold, G., Bloemer, K., Pape, G. R., Riethmüller, G., and Weiss, E. H. Polymorphic structure of the tumour necrosis factor (TNF) locus: an Nco I polymorphism in the first intron of the human TNF-β gene correlates with a variant amino acid in position 26 and a reduced level of TNF-β production. J Expl Med 173: 209-219, 1991
21. Mizuki, N., Ohno, S., Sato, T., Ishihara, M., Miyata, S., Nakamura, S., Naruse, T., Mizuki, H., Tsuji, K., and Inoko, H. Microsatellite polymorphism between the tumour necrosis factor and HLA-B genes in Behcet's disease. Hum Immunol 43: 129-135, 1995
22. Monos, D. S., Kamoun, M., Udalova, I. A., Csanky, E., Cizman, B., Turetskaya, R. L., Smirnova, J. B., Zharkov, V. G., Gasser, D., Zmijewski, C. M., Speilman, R. S., and Nedospasov, S. A. Genetic polymorphism of the human tumour necrosis factor region in insulin-dependent diabetes mellitus; linkage disequilibrium of TNFab microsatellite alleles with HLA haplotypes. Hum Immunol 44: 70-79, 1995
23. Nedospasov, S. A., Udalova, I. A., Kuprash, D. Y., and Tretskya, R. L. DNA sequence polymorphism at the human tumour necrosis factor locus. J Immunol 147: 1053-1059, 1991
24. Partenen, J. and Koskimies, S. Low degree of DNA polymorphism in the HLA-linked lymphotoxin (tumour necrosis factor-β) gene. Scand J Immunol 28: 313-316, 1988
25. Pociot, F., Mölvig, J., Worgensen, L., Worsae, H., Dalboge, H., Baek, and Nerup, J. A tumour necrosis factor beta gene polymorphism in relation to monokine secretion and insulin-dependent diabetes mellitus. Scand J Immunol 33: 37-49, 1991
26. Pociot, F., Briant, L., Jongeneel, C. V., Molvig, J., Worsaae, H., Abbal, M., Thomsen, M., Nerup, J., and Cambon-Thomsen, A. Association of tumour necrosis factor (TNF) and class-II histocompatibility complex alleles with the secretion of TNF-α and TNF-β by human mononuclear cells: a possible link to insulin-dependent diabetes mellitus. Eur J Immunol 23: 224-231, 1993
27. Santamaria, P., Gehrz, R. C., Bryan, M. K., and Barbosa, J. J. Involvement of Class-II MHC molecules in the LPS-induction of 1L-1/TNF secretions by human monocytes. Quantitative differences at the polymorphic level. J Immunol 143: 913-922, 1989
28. Udalova, I. A., Nedospasov, S. A., Webb, G. C., Chaplin, D. D., and Turetskya, R. L. Highly informative typing of the human TNF locus using six adjacent polymorphic markers. Genomics 16: 180-186, 1993
29. Wilson, A. G., Di Giovine, F. S., Blakemore, A. I. F., and Duff, G. W. Single base change in the human tumour necrosis factor alpha (TNFα) gene detectable by Nco I restriction of the PCR product. Hum Mol Genet 1: 353, 1992
30. Wilson, A. G., Symons, J. A., McDowell, T. L., Di Giovine, F. S., and Duff, G. W. Effects of a tumour necrosis factor (TNF) promoter base change on transcriptional activity. Br J Rheumatol 33: 89, 1994a
31. Wilson, A. G., Gordon, C., di Giovine, F. S., de Vries, N., van de Putte, L. B. A., and Duff, G. W. A genetic association between systemic lupus erythematosus and tumour necrosis factor alpha. Eur J Immunol 24: 191-195, 1994b