Reaction mechanism of Escherichia coli dihydrodipicolinate synthase investigated by X-ray crystallography and NMR spectroscopy

Biochemistry

Volumn 36, Issue 1, 1997, Pages 24-33

  Blickling, Stefan ^a   Renner, Christian ^a   Laber, Bernd ^b   Pohlenz, Hans Dieter ^b   Holak, Tad A ^a   Huber, Robert ^a  

^a MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

^b SANOFI   (France)

Author keywords

[No Author keywords available]

Indexed keywords

SYNTHETASE;

ARTICLE; CATALYSIS; CONTROLLED STUDY; CRYSTAL STRUCTURE; ENZYME CHEMISTRY; ENZYME SUBSTRATE COMPLEX; ESCHERICHIA COLI; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; REACTION ANALYSIS; X RAY CRYSTALLOGRAPHY;

BACTERIAL PROTEINS; BINDING SITES; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; ESCHERICHIA COLI; HYDRO-LYASES; LYSINE; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, CHEMICAL; MODELS, MOLECULAR; MOLECULAR STRUCTURE; PICOLINIC ACIDS; PROTEIN CONFORMATION; PYRUVATES; SCHIFF BASES; SUCCINATES;

EID: 0031012162     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi962272d     Document Type: Article

References (46)

1. Arnez, J. G. (1994) J. Appl. Crystallogr. 27, 649-653.
2. Bakhiet, N., Forney, F. W., Stahly, D. P., & Daniels, L. (1984) Curr. Microbiol. 10, 195-198.
3. Bartlett, A. T. M., & White, P. J. (1986) J. Gen. Microbiol. 132, 3169-3177.
4. Brünger, A. (1992) X-PLOR (Version 3.1) Manual, Yale University Press, New Haven and London.
5. CCP4 (1994) Acta Crystallogr., Sect. D 50, 760-763.
6. Coulter, C. V., Gerrard, J. A., Kraunsoe, J. A. E., Moore, D. J. & Pratt, A. T. (1996) Tetrahedron 52, 7127-7136.
7. Couper, L., & Robins, D. J. (1992) Tetrahedron Lett. 33, 2717-2720.
8. Couper, L., Mckendrick, J. E., Robins, D. J., & Chrystal, E. J. T. (1994) Bioorg. Med. Chem. Lett. 4, 2267-2272.
9. Cremer, J., Treptow, C., Eggeling, L., & Sahm, H. (1988) J. Gen. Microbiol. 134, 3221-3229.
10. Davies, D. G., & Bax, A. (1985) J. Am. Chem. Soc. 107, 2820-2821.
11. Dereppe, C., Bold, G., Ghisalba, O., Ebert, E., & Schär, H.-P. (1992) Plant Physiol. 98, 813-821.
12. Engh, R. A., & Huber, R. (1991) Acta Crystallogr., Sect. A 98, 392-400.
13. Ernst, R. R., Bodenhausen, G., & Wokaun, A. (1987) Principles of NMR in one and two dimension, Clarendon Press, Oxford.
14. Frisch, D. A., Gengenbach, B. G., Tommey, A. M., Sellner, J. M., Somers, D. A., & Myers, D. E. (1991) Plant Physiol. 96, 444-452.
15. Ghislain, M., Frankard, V., & Jacobs, M. (1990) Planta 180, 480-486.
16. Ghislain, M., Frankard, V., & Jacobs, M. (1995) Plant J. 8, 733-743.
17. Grazi, E., Cheng, T., & Horecker, B. L. (1962) Biochem. Biophys. Res. Commun. 7, 250-253.
18. Gueron, M., Plateau, P., & Decorps, M. (1991) Prog. Nucl. Magn. Reson. Spectrosc. 23, 135-209.
19. Healy, M. J., & Christen, P. (1973) Biochemistry 12, 35-41.
20. Hoganson, D. A., & Stahly, D. P. (1975) J. Bacteriol. 124, 1344-1350.
21. Izard, T., Lawrence, M. C., Malby, R. L., Lilley, G. G., & Colman, P. M. (1994) Structure 2, 361-369.
22. Jörnvall, H., Perrson, B., Krook, M., Atrian, S., González-Duarte, R., Jeffery, J., & Ghosh, D. ( 1995) Biochemistry 34, 6003-6013.
23. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
24. Kumpaisal, R., Hashimoto, T., & Yamada, Y. (1987) Plant Physiol. 85, 145-151.
25. Laber, B., Gomis-Rüth, X., Romão, M. J., & Huber, R. (1992) Biochem. J. 288, 291-295.
26. Leslie, A. G. W. (1990) in: Crystallographic computing, Oxford University Press, New York.
27. Littlechild, J., & Watson, H. C. (1993) Trends Biochem. Sci. 18, 36-39.
28. Mirwaldt, C., Korndörfer, I., & Huber, R. (1995) J. Mol. Biol. 246, 227-239.
29. Morris, A. J., & Tolan, D. R. (1994) Biochemistry 33, 12291-12297.
30. Plateau, P., & Gueron, M. (1982) J. Am. Chem. Soc. 104, 7310-7311.
31. Reinemer, P., Dirr, H. W., Ladenstein, R., Schäffer, J., Gallay, O., & Huber, R. (1991) EMBO J. 10, 1997-2005.
32. Selli, A., Crociani, F., Di Gioia, D., Fava, F., Crisetig, G., & Matteuzi, D. (1994) Ital. J. Biochem. 4, 29-35.
33. Shaver, J. M., Bittel, D. C., Sellner, J. M., Frisch, D. A., Somers, D. A., & Gengenbach, B. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 1962-1966.
34. Shedlarski, J. G., & Gilvarg, C. (1969) J. Biol. Chem. 245, 1362-1373.
35. Stahly, D. P. (1969) Biochim. Biophys. Acta 191, 439-451.
36. Steigemann, W. (1991) Cristallographic computing 5, Oxford University Press, Oxford.
37. Sygush, J., Beaudry, D., & Allaire, M. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 7846-7850.
38. Tosaka, O., & Takinami, K. (1978) Agric. Biol. Chem. 42, 95-100.
39. Tudor, D. W., Lewis, T., & Robins, D. J. (1993) Synthesis, 1061-1062.
40. Turk, D. (1988) Development and usage of a molecular graphics program, Ph.D. Thesis, University in Ljubljana, Slovenia.
41. Wallsgrove, R. M., & Mazelis, M. (1981) Phytochemistry 20, 2651-2655.
42. Webster, F. H., & Lechowich, R. V. (1970) J. Bacteriol. 101, 118-126.
43. Weng, S. H., & Leussing, D. L. (1983) J. Am. Chem. Soc. 105, 4082-4090.
44. Yakamura, F., Ikeda, Y., Kimura, K. & Sasakawa, T. (1974) J. Biochem. 76, 611-621.
45. Yano, T., Mizuno, T., & Kagamiyama, H. (1993) Biochemistry 32, 1810-1815.
46. Yugari, Y., & Gilvarg, C. (1965) J. Biol. Chem. 240, 4710-4716.