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1
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0343446730
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Griffith J.D. New York: John Wiley and Sons
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Griffith JD. Electron Microscopy in Biology. II:1982;John Wiley and Sons, New York.
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(1982)
Electron Microscopy in Biology
, vol.2
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2
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0017869441
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Electron microscopic visualization of chromatin and other DNA - protein complexes
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Griffith J, Christiansen G. Electron microscopic visualization of chromatin and other DNA - protein complexes. Annu Rev Biophys Bioeng. 7:1978;19-35.
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(1978)
Annu Rev Biophys Bioeng
, vol.7
, pp. 19-35
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Griffith, J.1
Christiansen, G.2
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3
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0026666265
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Electron microscopic visualization of DNA and DNA - protein complexes as adjunct to biochemical studies
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Thresher R, Griffith J. Electron microscopic visualization of DNA and DNA - protein complexes as adjunct to biochemical studies. Methods Enzymol. 211:1992;481-490.
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(1992)
Methods Enzymol
, vol.211
, pp. 481-490
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Thresher, R.1
Griffith, J.2
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4
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0343011045
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A general method for labelling specific ends of DNA with biotin, biotin - streptavadin, or radioactive nucleotides
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Bortner C, Griffith J. A general method for labelling specific ends of DNA with biotin, biotin - streptavadin, or radioactive nucleotides. US Biochem Comm. 20:1993;1-5.
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(1993)
US Biochem Comm
, vol.20
, pp. 1-5
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Bortner, C.1
Griffith, J.2
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5
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0025355750
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Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models
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Muzard G, Theveny B, Revet B. Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models. EMBO J. 9:1990;1289-1298.
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(1990)
EMBO J
, vol.9
, pp. 1289-1298
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Muzard, G.1
Theveny, B.2
Revet, B.3
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6
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0029994947
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Linker histone-dependent DNA structure in linear mononucleosomes
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Hamiche A, Schultz P, Ramakrishnan V, Oudet P, Prunell A. Linker histone-dependent DNA structure in linear mononucleosomes. J Mol Biol. 257:1996;30-42.
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(1996)
J Mol Biol
, vol.257
, pp. 30-42
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Hamiche, A.1
Schultz, P.2
Ramakrishnan, V.3
Oudet, P.4
Prunell, A.5
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7
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0029583420
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Chromatin conformation and salt-induced compaction: Three-dimensional structural information from cryoelectron microscopy
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Bednar J, Horowitz RA, DuBochet J, Woodcock CL. Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy. J Cell Biol. 131:1995;1365-1376.
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(1995)
J Cell Biol
, vol.131
, pp. 1365-1376
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Bednar, J.1
Horowitz, R.A.2
Dubochet, J.3
Woodcock, C.L.4
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8
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0029007043
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Fate of linear and supercoiled multinucleosomic templates during transcription
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This work describes a convincing EM approach to a problem that has been unusually difficult to solve biochemically. of outstanding interest
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Heggeler-Bordier BT, Schild-Poulter C, Chapel S, Wahli W. Fate of linear and supercoiled multinucleosomic templates during transcription. EMBO J. 14:1995;2561-2569 This work describes a convincing EM approach to a problem that has been unusually difficult to solve biochemically. of outstanding interest.
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(1995)
EMBO J
, vol.14
, pp. 2561-2569
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Heggeler-Bordier, B.T.1
Schild-Poulter, C.2
Chapel, S.3
Wahli, W.4
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9
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0027941198
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Preferential nucleosome assembly at DNA triplet repeats from the myotonic dystrophy gene
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Wang Y-H, Amirhaeri S, Kang S, Wells RD, Griffith J. Preferential nucleosome assembly at DNA triplet repeats from the myotonic dystrophy gene. Science. 265:1994;669-671.
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(1994)
Science
, vol.265
, pp. 669-671
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Wang, Y.-H.1
Amirhaeri, S.2
Kang, S.3
Wells, R.D.4
Griffith, J.5
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10
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0030575839
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Long CCG triplet repeat blocks exclude nucleosomes: A possible mechanism for the nature of fragile sites in chromosomes
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This paper together with [8], provides a excellent example of how direct EM visualization can provide important insights into problems of importance in medical genetics. of outstanding interest
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Wang Y-H, Gellibolian R, Shimizu M, Wells RD, Griffith J. Long CCG triplet repeat blocks exclude nucleosomes: a possible mechanism for the nature of fragile sites in chromosomes. J Mol Biol. 263:1996;511-516 This paper together with [8], provides a excellent example of how direct EM visualization can provide important insights into problems of importance in medical genetics. of outstanding interest.
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(1996)
J Mol Biol
, vol.263
, pp. 511-516
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Wang, Y.-H.1
Gellibolian, R.2
Shimizu, M.3
Wells, R.D.4
Griffith, J.5
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11
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0029100264
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Relative orientation of RNA helices in a group I ribozyme determined by helix extension electron microscopy
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The description of helix extension microscopy and of its use to study fine structure of a complex, folded RNA. of outstanding interest
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Nakamura T, Wang Y-H, Zaug A, Griffith J, Cech T. Relative orientation of RNA helices in a group I ribozyme determined by helix extension electron microscopy. EMBO J. 14:1995;4849-4859 The description of helix extension microscopy and of its use to study fine structure of a complex, folded RNA. of outstanding interest.
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(1995)
EMBO J
, vol.14
, pp. 4849-4859
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Nakamura, T.1
Wang, Y.-H.2
Zaug, A.3
Griffith, J.4
Cech, T.5
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12
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0030985675
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Human p53 binds Holliday junctions strongly and facilitates their cleavage
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Lee S, Cavallo L, Griffith J. Human p53 binds Holliday junctions strongly and facilitates their cleavage. J Biol Chem. 272:1997;7532-7539.
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(1997)
J Biol Chem
, vol.272
, pp. 7532-7539
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Lee, S.1
Cavallo, L.2
Griffith, J.3
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13
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0031051010
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Saccharomyces cerevissiae MSH2, a mispaired base recognition protein also recognizes Holliday junctions in DNA
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Alani E, Lee S, Kane M, Griffith J, Kolodner R. Saccharomyces cerevissiae MSH2, a mispaired base recognition protein also recognizes Holliday junctions in DNA. J Mol Biol. 265:1997;289-301.
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(1997)
J Mol Biol
, vol.265
, pp. 289-301
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Alani, E.1
Lee, S.2
Kane, M.3
Griffith, J.4
Kolodner, R.5
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14
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0027260602
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Imaging of RNA - protein interactions in splicing complexes with dark-field STEM
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Sibbald MJ, Carlemalm EC, Beer M, Sproat BS. Imaging of RNA - protein interactions in splicing complexes with dark-field STEM. J Struct Biol. 110:1993;111-121.
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(1993)
J Struct Biol
, vol.110
, pp. 111-121
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Sibbald, M.J.1
Carlemalm, E.C.2
Beer, M.3
Sproat, B.S.4
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15
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0029983584
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Structure of recombinant rat UBF by electron image analysis and homology modelling
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An excellent application of STEM analysis and molecular modeling. of outstanding interest
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Neil KJ, Ridsdale RA, Rutherford B, Taylor L, Larson DE, Glibetic M, Rothblum LI, Harauz G. Structure of recombinant rat UBF by electron image analysis and homology modelling. Nucleic Acids Res. 24:1996;1472-1480 An excellent application of STEM analysis and molecular modeling. of outstanding interest.
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(1996)
Nucleic Acids Res
, vol.24
, pp. 1472-1480
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Neil, K.J.1
Ridsdale, R.A.2
Rutherford, B.3
Taylor, L.4
Larson, D.E.5
Glibetic, M.6
Rothblum, L.I.7
Harauz, G.8
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16
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0029150031
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TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a toroid-shaped molecule that binds transcripts containing GAG or UAG repeats separated by two nucleotides
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Babitzke P, Bear DG, Yanofsky C. TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a toroid-shaped molecule that binds transcripts containing GAG or UAG repeats separated by two nucleotides. Proc Natl Acad Sci USA. 92:1995;7916-7920.
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(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 7916-7920
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Babitzke, P.1
Bear, D.G.2
Yanofsky, C.3
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17
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0029759341
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Single-stranded DNA binding alters human replication protein A structure and facilitates interaction with DNA-dependent protein kinase
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Blackwell LJ, Borowiec JA, Mastrangelo IA. Single-stranded DNA binding alters human replication protein A structure and facilitates interaction with DNA-dependent protein kinase. Mol Cell Biol. 16:1996;4798-4807.
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(1996)
Mol Cell Biol
, vol.16
, pp. 4798-4807
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Blackwell, L.J.1
Borowiec, J.A.2
Mastrangelo, I.A.3
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18
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0023058994
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Visualization of the bent helix in kinetoplast DNA by electron microscopy
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Griffith J, Bleyman M, Rauch C, Kitchin P, Englund P. Visualization of the bent helix in kinetoplast DNA by electron microscopy. Cell. 46:1986;717-724.
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(1986)
Cell
, vol.46
, pp. 717-724
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Griffith, J.1
Bleyman, M.2
Rauch, C.3
Kitchin, P.4
Englund, P.5
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19
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0028956314
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Visualization of TBP oligomers binding and bending the HIV-1 and adeno promoters
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This work presents several EM approaches to measuring DNA bending. of outstanding interest
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Griffith J, Makhov A, Zawel L, Reinberg D. Visualization of TBP oligomers binding and bending the HIV-1 and adeno promoters. J Mol Biol. 246:1995;576-584 This work presents several EM approaches to measuring DNA bending. of outstanding interest.
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(1995)
J Mol Biol
, vol.246
, pp. 576-584
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Griffith, J.1
Makhov, A.2
Zawel, L.3
Reinberg, D.4
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20
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0026654184
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An electron microscopic study of (A)BC excinuclease: DNA is sharply bent in the UVRB - DNA complex
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Shi Q, Thresher R, Sancar A, Griffith J. An electron microscopic study of (A)BC excinuclease: DNA is sharply bent in the UVRB - DNA complex. J Mol Biol. 226:1992;425-432.
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(1992)
J Mol Biol
, vol.226
, pp. 425-432
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Shi, Q.1
Thresher, R.2
Sancar, A.3
Griffith, J.4
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21
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0027968833
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Flow linear dichroism and electron microscopic analysis of protein - DNA complexes of a mutant UvrB protein that binds to but cannot kink DNA
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Hsu D, Takahashi M, Delagoutte E, Bertrand-Burrgraf E, Wang Y-H, Norden B, Fuchs R, Griffith J, Sancar A. Flow linear dichroism and electron microscopic analysis of protein - DNA complexes of a mutant UvrB protein that binds to but cannot kink DNA. J Mol Biol. 241:1994;645-650.
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(1994)
J Mol Biol
, vol.241
, pp. 645-650
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Hsu, D.1
Takahashi, M.2
Delagoutte, E.3
Bertrand-Burrgraf, E.4
Wang, Y.-H.5
Norden, B.6
Fuchs, R.7
Griffith, J.8
Sancar, A.9
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22
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0022545056
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DNA loops induced by cooperative binding of lambda repressor
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Griffith J, Hochschild A, Ptashne M. DNA loops induced by cooperative binding of lambda repressor. Nature. 322:1986;750-752.
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(1986)
Nature
, vol.322
, pp. 750-752
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Griffith, J.1
Hochschild, A.2
Ptashne, M.3
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23
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0028968936
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A multimerizing transcriptional activator of sea urchin embryos capable of looping DNA
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Zeller R, Griffith J, Moore J, Kirchhamer C, Britten R, Davidson E. A multimerizing transcriptional activator of sea urchin embryos capable of looping DNA. Proc Natl Acad Sci USA. 92:1995;2989-2993.
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(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 2989-2993
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Zeller, R.1
Griffith, J.2
Moore, J.3
Kirchhamer, C.4
Britten, R.5
Davidson, E.6
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24
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0028606859
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P53 oligomerization and DNA looping are linked with transcriptional activation
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Stenger JE, Tegtmeyer P, Mayr GA, Reed M, Wang Y, Wang P, Hough PVC, Mastrangelo IA. p53 oligomerization and DNA looping are linked with transcriptional activation. EMBO J. 13:1994;6011-6020.
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(1994)
EMBO J
, vol.13
, pp. 6011-6020
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Stenger, J.E.1
Tegtmeyer, P.2
Mayr, G.A.3
Reed, M.4
Wang, Y.5
Wang, P.6
Hough, P.V.C.7
Mastrangelo, I.A.8
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25
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0025836660
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Epstein - Barr nuclear antigen 1 mediates a DNA loop within the latent replication origin of Epstein - Barr virus
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Frappier L, O'Donnell M. Epstein - Barr nuclear antigen 1 mediates a DNA loop within the latent replication origin of Epstein - Barr virus. Proc Natl Acad Sci USA. 88:1991;10875-10879.
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(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10875-10879
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Frappier, L.1
O'Donnell, M.2
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26
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0025721021
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DNA looping between the origin of replication of Epstein - Barr virus and its enhancer site: Stabilization of an origin complex with Epstein - Barr nuclear antigen 1
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Su W, Middleton T, Sugden B, Echols H. DNA looping between the origin of replication of Epstein - Barr virus and its enhancer site: stabilization of an origin complex with Epstein - Barr nuclear antigen 1. Proc Natl Acad Sci USA. 88:1991;10870-10874.
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(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10870-10874
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Su, W.1
Middleton, T.2
Sugden, B.3
Echols, H.4
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27
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0027170306
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RIP60 dimers and multiples of dimers assemble link structures at an origin of bidirectional replication in the dihydrofolate reductase amplicon of chinese hamster ovary cells
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Mastrangelo IA, Held PG, Dailey L, Wall JS, Hough PVC, Heintz N, Heintz NH. RIP60 dimers and multiples of dimers assemble link structures at an origin of bidirectional replication in the dihydrofolate reductase amplicon of chinese hamster ovary cells. J Mol Biol. 232:1993;766-778.
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(1993)
J Mol Biol
, vol.232
, pp. 766-778
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Mastrangelo, I.A.1
Held, P.G.2
Dailey, L.3
Wall, J.S.4
Hough, P.V.C.5
Heintz, N.6
Heintz, N.H.7
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28
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0029923754
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The herpes simplex virus type I UL9 protein carries out origin specific DNA unwinding and forms stem/loop structures
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This study describes the ATP-dependent growth of DNA loops and several means of its analysis using EM. of special interest
-
Makhov A, Boehmer P, Lehman IR, Griffith J. The herpes simplex virus type I UL9 protein carries out origin specific DNA unwinding and forms stem/loop structures. EMBO J. 15:1996;1742-1750 This study describes the ATP-dependent growth of DNA loops and several means of its analysis using EM. of special interest.
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(1996)
EMBO J
, vol.15
, pp. 1742-1750
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Makhov, A.1
Boehmer, P.2
Lehman, I.R.3
Griffith, J.4
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29
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0028330508
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Visualization of protein - nucleic acid interactions involved in the in vitro assembly of the Escherichia coli 50 S ribosomal subunit
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Tumminia SJ, Hellmann W, Wall JS, Boublik M. Visualization of protein - nucleic acid interactions involved in the in vitro assembly of the Escherichia coli 50 S ribosomal subunit. J Mol Biol. 235:1994;1239-1250.
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(1994)
J Mol Biol
, vol.235
, pp. 1239-1250
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Tumminia, S.J.1
Hellmann, W.2
Wall, J.S.3
Boublik, M.4
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30
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0029989329
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Mass spectrometric composition and molecular mass of Lumbricus terrestris hemoglobin: A refined model of its quaternary structure
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Martin PD, Kuchumov AR, Green BN, Oliver RWA, Braswell EH, Wall JS, Vinogradov SN. Mass spectrometric composition and molecular mass of Lumbricus terrestris hemoglobin: a refined model of its quaternary structure. J Mol Biol. 255:1996;154-169.
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(1996)
J Mol Biol
, vol.255
, pp. 154-169
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Martin, P.D.1
Kuchumov, A.R.2
Green, B.N.3
Oliver, R.W.A.4
Braswell, E.H.5
Wall, J.S.6
Vinogradov, S.N.7
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31
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0021095633
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Procedure for freeze-drying molecules adsorbed to mica flakes
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Heuser J. Procedure for freeze-drying molecules adsorbed to mica flakes. J Mol Biol. 169:1983;155-195.
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(1983)
J Mol Biol
, vol.169
, pp. 155-195
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Heuser, J.1
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32
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0024843435
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Visualization of RecA protein and its complexes with DNA by quick-freeze/deep-etch electron microscopy
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Heuser J, Griffith J. Visualization of RecA protein and its complexes with DNA by quick-freeze/deep-etch electron microscopy. J Mol Biol. 210:1989;473-484.
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(1989)
J Mol Biol
, vol.210
, pp. 473-484
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Heuser, J.1
Griffith, J.2
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33
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0025186240
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Three-stranded paranemic joints: Architecture, topological constraints, and movement
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Bortner C, Griffith J. Three-stranded paranemic joints: architecture, topological constraints, and movement. J Mol Biol. 215:1990;623-634.
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(1990)
J Mol Biol
, vol.215
, pp. 623-634
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Bortner, C.1
Griffith, J.2
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34
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0026542543
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The apical localization of transcribing RNA polymerases on supercoiled DNA prevents their rotation around the template
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Heggeler-Bordier BT, Wahli W, Adrian M, Stasiak A, Dubochet J. The apical localization of transcribing RNA polymerases on supercoiled DNA prevents their rotation around the template. EMBO J. 11:1992;667-672.
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(1992)
EMBO J
, vol.11
, pp. 667-672
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Heggeler-Bordier, B.T.1
Wahli, W.2
Adrian, M.3
Stasiak, A.4
Dubochet, J.5
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35
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0028049305
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The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix
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Bednar J, Furrer P, Stasiak A, Dubochet J. The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix. J Mol Biol. 235:1994;825-847.
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(1994)
J Mol Biol
, vol.235
, pp. 825-847
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Bednar, J.1
Furrer, P.2
Stasiak, A.3
Dubochet, J.4
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36
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0029618936
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Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA
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Bednar J, Furrer P, Katritch V, Stasiak A, Dubochet J, Stasiak A. Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA. J Mol Biol. 254:1995;579-591.
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(1995)
J Mol Biol
, vol.254
, pp. 579-591
-
-
Bednar, J.1
Furrer, P.2
Katritch, V.3
Stasiak, A.4
Dubochet, J.5
Stasiak, A.6
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37
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0029866788
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Atomic force microscopy of long and short double-stranded, single-stranded and triple-stranded nucleic acids
-
This work presents a good view of the level of current resolution, and the problems involved in DNA imaging using AFM. of outstanding interest
-
Hansma HG, Revenko I, Kim K, Laney DE. Atomic force microscopy of long and short double-stranded, single-stranded and triple-stranded nucleic acids. Nucleic Acids Res. 24:1996;713-720 This work presents a good view of the level of current resolution, and the problems involved in DNA imaging using AFM. of outstanding interest.
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(1996)
Nucleic Acids Res
, vol.24
, pp. 713-720
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Hansma, H.G.1
Revenko, I.2
Kim, K.3
Laney, D.E.4
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38
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0028559915
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Following the assembly of RNA polymerase - DNA complexes in aqueous solutions with the scanning force microscope
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Guthold M, Bezanilla M, Erie DA, Jenkins B, Hansma HG, Bustamante C. Following the assembly of RNA polymerase - DNA complexes in aqueous solutions with the scanning force microscope. Proc Natl Acad Sci USA. 91:1994;12927-12931.
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(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12927-12931
-
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Guthold, M.1
Bezanilla, M.2
Erie, D.A.3
Jenkins, B.4
Hansma, H.G.5
Bustamante, C.6
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39
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0028964501
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Visualization of nucleosomal substructure in native chromatin by atomic force microscopy
-
Martin LD, Vesenka JP, Henderson E, Dobbs DL. Visualization of nucleosomal substructure in native chromatin by atomic force microscopy. Biochemistry. 34:1995;4610-4616.
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(1995)
Biochemistry
, vol.34
, pp. 4610-4616
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Martin, L.D.1
Vesenka, J.P.2
Henderson, E.3
Dobbs, D.L.4
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40
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0027360849
-
Atomic force microscopy of mammalian sperm chromatin
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Allen MJ, Lee C, Lee JD IV, Pogany GC, Balooch M, Siekhaus WJ, Balhorn R. Atomic force microscopy of mammalian sperm chromatin. Chromosoma. 102:1993;623-630.
-
(1993)
Chromosoma
, vol.102
, pp. 623-630
-
-
Allen, M.J.1
Lee, C.2
Lee J.D. IV3
Pogany, G.C.4
Balooch, M.5
Siekhaus, W.J.6
Balhorn, R.7
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41
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0027984749
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Probing chromatin with the scanning force microscope
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Fritzsche W, Schaper A, Jovin TM. Probing chromatin with the scanning force microscope. Chromosoma. 103:1994;231-236.
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(1994)
Chromosoma
, vol.103
, pp. 231-236
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Fritzsche, W.1
Schaper, A.2
Jovin, T.M.3
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42
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0027960444
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Three dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy
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Leuba SH, Yang G, Robert C, Samori B, Van Holde K, Zlatanova J, Bustamante C. Three dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy. Proc Natl Acad Sci USA. 91:1994;11621-11625.
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(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 11621-11625
-
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Leuba, S.H.1
Yang, G.2
Robert, C.3
Samori, B.4
Van Holde, K.5
Zlatanova, J.6
Bustamante, C.7
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