Time-resolved room temperature tryptophan phosphorescence in proteins

Methods in Enzymology

Volumn 278, Issue , 1997, Pages 49-71

  Schauerte, Joseph A ^a   Steel, Duncan G ^a   Gafni, Ari ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL DEHYDROGENASE; ALKALINE PHOSPHATASE; TRYPTOPHAN;

CHROMATOPHORE; ENTROPY; ENZYME ACTIVITY; FLUORESCENCE; LASER; LUMINESCENCE; PHOSPHORESCENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; REVIEW; SPECTROFLUOROMETRY; SPECTROSCOPY; ULTRAVIOLET RADIATION;

EID: 0031008248     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0076-6879(97)78006-6     Document Type: Article

References (89)

1. S. V. Konev, "Fluorescence and Phosphorescence of Proteins and Nucleic Acids." Plenum, New York, 1967.
2. P. Debye and J. O. Edwards, Science 116, 143 (1952).
3. G. B. Strambini and E. Gabellieri, Photochem. Photobiol. 39(6), 725 (1984).
4. N. K. Shah and R. D. Ludescher, Photochem. Photobiol. 58(2), 169 (1993).
5. J. W. Hastings and Q. H. Gibson, J. Biol. Chem. 242, 720 (1967).
6. M. L. Saviotti and W. C. Galley, Proc. Natl. Acad. Sci. U.S.A. 71(10), 4154 (1974).
7. S. Papp and J. M. Vanderkooi, Photochem. Photobiol. 49(6), 775 (1989).
8. J. M. Vanderkooi, D. B. Calhoun, and S. W. Englander, Science 236 (4801), 568 (1987).
9. J. M. Vanderkooi and J. W. Berger, Biochim. Biophys. Acta 976(1), 1 (1989).
10. J. M. Vanderkooi, Tryptophan phosphorescence from proteins at room temperature. In "Topics in Fluorescence Spectroscopy" (J. R. Lakowicz, ed.), pp. 113-136. Plenum Press, New York, 1992.
11. M. Sokolovsky and E. Daniel, Methods Enzymol. 49, 236 (1978).
12. N. E. Geacintov and H. C. Brenner, Photochem. Photobiol. 50(6), 841 (1989).
13. W. C. Galley and L. Stryer, Biochemistry 8(5), 1831 (1969).
14. S. K. Lower and M. A. El-Sayed, Chem. Rev. 66, 199 (1966).
15. G. B. Strambini and M. Gonnelli, Chem. Phys. Lett. 115, 196 (1985).
16. G. B. Strambini and M. Gonnelli, J. Am. Chem. Soc. 117, 7646 (1995).
17. M. Gonnelli and G. B. Strambini, Biochemistry 34, 13847 (1995).
18. C. A. Ghiron, M. Bazin, and R. Santus, Photochem. Photobiol. 48(4), 539 (1988).
19. C. Ghiron, M. Bazin, and R. Santus, Biochim. Biophys. Acta 957, 207 (1988).
20. J. M. Vanderkooi, S. W. Englander, S. Papp, W. W. Wright, and C. S. Owen, Proc. Natl. Acad. Sci. U.S.A. 87(13), 5099 (1990). [Published erratum appears in Proc. Natl. Acad. Sci. U.S.A. 87(22), 9072 (1990)].
21. J. M. Vanderkooi, D. B. Calhoun, C. S. Owen, S. Papp, W. W. Wright, and S. W. Englander, Mol. Cryst. Liq. Cryst. 194, 209 (1991).
22. V. Dadak, J. M. Vanderkooi, and W. W. Wright, Biochim. Biophys. Acta 1100(1), 33 (1992).
23. F. K. Klemens and D. R. McMillin, Photochem. Photobiol. 55(5), 671 (1992).
24. S. Papp, T. E. King, and J. M. Vanderkooi, FEBS Lett. 283(1), 113 (1991).
25. G. B. Strambini, Biophys. J. 52(1), 23 (1987).
26. D. B. Calhoun, J. M. Vanderkooi, and S. W. Englander, Biochemistry 22(7), 1533 (1983).
27. D. B. Calhoun, J. M. Vanderkooi, G. V. D. Woodrow, and S. W. Englander, Biochemistry 22(7), 1526 (1983).
28. D. B. Calhoun, S. W. Englander, W. W. Wright, and J. M. Vanderkooi, Biochemistry 27(22), 8466 (1988).
29. S. Papp, J. M. Vanderkooi, C. S. Owen, G. R. Holtom, and C. M. Phillips, Biophys. J. 58, 177 (1990).
30. G. B. Strambini, Biophys. J. 43(1), 127 (1983).
31. J. M. Vanderkooi, W. W. Wright, and M. Erecinska, Biochim. Biophys. Acta 1207(2), 249 (1994).
32. W. W. Wright, C. S. Owen, and J. M. Vanderkooi, Biochemistry 31(28), 6538 (1992).
33. B. Somogyi, J. A. Norman, and A. Rosenberg, Biophys. J. 50(1), 55 (1986).
34. J. M. Vanderkooi, C. S. Owen, and W. W. Wright, Proc. S.P.I.E. Int. Soc. Opt. Eng. 1640, 473 (1992).
35. Z. Li, W. E. Lee, and W. C. Galley, Biophys. J. 56(2), 361 (1989).
36. Z. Li, A. Bruce, and W. C. Galley, Biophys. J. 61, 1364 (1992).
37. B. D. Schlyer, E. Lau, and A. H. Maki, Biochemistry 31(18), 4375 (1992).
38. M. L. Meyers and P. G. Seybold, Anal. Chem. 51, 1609 (1979).
39. M. Monsigny, F. Delmotte, and C. Helene, Proc. Natl. Acad. Sci. U.S.A. 75(3), 1324 (1978).
40. G. B. Srambini and E. Gabellieri, J. Phys. Chem. 95, 4352 (1991).
41. S.-J. Kim, F. N. Chowdhury, W. Stryjewski, E. S. Younathan, P. S. Russo, and M. D. Barkley, Biophys. J. 65, 215 (1993).
42. R. F. Chen, J. R. Knutson, H. Ziffer, and D. Porter, Biochemistry 30(21), 5184 (1991).
43. J. B. Ross, H. R. Wyssbrod, R. A. Porter, G. P. Schwartz, C. A. Michaels, and W. R. Laws, Biochemistry 31(6), 1585 (1992).
44. Z. Bajzer and F. G. Prendergast, Biophys. J. 65, 2313 (1993).
45. I. Gryczynski, M. Eftink, and J. R. Lakowicz, Biochim. Biophys. Acta 954, 244 (1988).
46. H. Frauenfelder, S. G. Sligar, and P. G. Wolynes, Science 254, 1598 (1991).
47. B. D. Schlyer, J. A. Schauerte, D. G. Steel, and A. Gafni, The nonexponential decay of room temperature phosphorescence: Evidence for several slowly interconverting or static protein conformers. In "Time-Resolved Laser Spectroscopy in Biochemistry," Vol. IV. SPIE, Los Angeles, 1994.
48. B. D. Schlyer, J. A. Schauerte, D. G. Steel, and A. Gafni, Biophys. J. 67(3), 1192 (1994).
49. J. V. Mersol, D. G. Steel, and A. Gafni, Biophys. Chem. 48(2), 281 (1993).
50. V. Subramaniam, N. C. Bergenhem, A. Gafni, and D. G. Steel, Biochemistry 34(4), 1133 (1995).
51. P. Cioni and G. B. Strambini, J. Mol. Biol 242, 291 (1994).
52. M. Gonnelli and G. B. Strambini, J. Phys. Chem. 92, 2854 (1988).
53. A. Ansari, C. M. Jones, E. R. Henry, J. Hofrichter, and W. A. Eaton, Science 256, 1796 (1992).
54. D. B. Calhoun and S. W. Englander, Biochemistry 24, 2095 (1985).
55. M. Gonnelli, A. Puntoni, and G. B. Strambini, J. Fluoresc. 2, 157 (1992).
56. M. Gonnelli and G. B. Strambini, Biophys. J. 65, 131 (1993).
57. S. Kishner, E. Trepman, and W. C. Galley, Can. J. Biochem. 57(11), 1299 (1979).
58. J. V. Mersol, A. Gershenson, D. G. Steel, and A. Gafni, Proc. S.P.I.E. Int. Soc. Opt. Eng. 1640, 462 (1992).
59. G. B. Strambini and M. Gonelli, Biochemistry 25, 2471 (1986).
60. G. B. Strambini, J. Mol. Liq. 42, 155 (1989).
61. E. Gabellieri and G. B. Strambini, Eur. J. Biochem. 221(1), 77 (1994).
62. B. Gavish and M. M. Werber, Biochemistry 18(7), 1269 (1979).
63. B. Gavish, Molecular dynamics and the transient strain model of enzyme catalysis. In "The Fluctuating Enzyme" (G. R. Welch, ed.), pp. 263-340. Wiley Interscience, New York, 1986.
64. J. Hansen, D. G. Steel, and A. Gafni, Biophys. J. 71(4), 2138-2143 (1996).
65. P. Cioni and G. B. Strambini, J. Photochem. Photobiol. B: Biol. 13, 289 (1992).
66. B. D. Schlyer, D. G. Steel, and A. Gafni, J. Biol. Chem. 270(39), 22890 (1995).
67. J. V. Mersol, H. Wang, D. G. Steel, and A. Gafni, Biophys. J. 61, 1647 (1992).
68. J. V. Mersol, D. G. Steel, and A. Gafni, Biochemistry 30(3), 668 (1991).
69. A. Gafni, J. V. Mersol, and D. G. Steel, Proc. S.P.I.E. Int. Soc. Opt. Eng. 1204, 753 (1990).
70. U. Gösele, M. Hansen, U. K. A. Klein, and R. Frey, Chem. Phys. Lett. 34, 519 (1975).
71. T. Horie and J. M. Vanderkooi, Biochim. Biophys. Acta 670(2), 294 (1981).
72. C. A. Parker, "Photoluminescence of Solutions: With Applications to Photochemistry and Analytical Chemistry." Elsevier, Amsterdam, 1968.
73. S. W. Englander, D. B. Calhoun, and J. J. Englander, Anal. Biochem. 161, 300 (1987).
74. J. M. Vanderkooi, G. Maniara, T. J. Green, and D. F. Wilson, J. Biol. Chem. 262(12), 5476 (1987).
75. W. R. Ware, "Time-Resolved Fluorescence Spectroscopy in Biochemistry and Biology" (R. B. Cundall and R. E. Dale, eds.), pp. 23-58. Plenum Press, New York, 1983.
76. R. Loudon, "The Quantum Theory of Light," 2nd Ed. Clarendon Press, Oxford, 1983.
77. K. M. L'Vov, S. V. Kuznetsov, and A. P. Kostikov, Biofizika 38, 574 (1993).
78. K. M. L'Vov, S. V. Kuznetsov, and A. P. Kostikov, Biofizika 38, 568 (1993).
79. S. Lerman, Am. J. Optom. Physiol. Opt. 64(1), 11 (1987).
80. J. L. Redpath, R. Santus, J. Ovadia, and L. I. Grossweiner, Int. J. Radiat. Biol. 27(2), 201 (1975).
81. E. I. Rivas, A. J. Paladini, and G. Cilento, Photochem. Photobiol. 40, 565 (1984).
82. T. Thu Ba, J. Chem. Phys. 70, 3544 (1979).
83. J. W. Berger and J. M. Vanderkooi, Photochem. Photobiol. 52(4), 855 (1990).
84. M. L. Johnson and L. M. Faunt, Methods Enzymol. 210, 1 (1992).
85. P. R. Bevington, "Data Reduction and Error Analysis for the Physical Sciences." McGraw-Hill, New York, 1969.
86. A. Vix and H. Lami, Biophys. J. 68, 1145 (1995).
87. J. H. Justice (Ed.), "Maximum Entropy and Bayesian Methods in Applied Statistics." Cambridge University Press, Cambridge, 1986.
88. J. R. Knutson, J. M. Beechem, and L. Brand, Chem. Phys. Lett. 102(6), 501 (1983).
89. L. Brand and M. L. Johnson, Methods Enzymol. 210, (1992).