Data on six short-tandem repeat polymorphisms in an autochthonous basque population

Human Heredity

Volumn 47, Issue 3, 1997, Pages 131-137

  Iriondo, M ^a   Barbero, M C ^a   Izagirre, N ^a   Manzano, C ^a  

^a UNIVERSITY OF THE BASQUE COUNTRY UPV EHU   (Spain)

Author keywords

Basque population; HUMCSF1P0; HUMFES FPS; HUMHPRTB; HUMTH01; HUMTPOX; HUMvWF

Indexed keywords

ALLELE; ARTICLE; COMPARATIVE STUDY; CONTROLLED STUDY; EUROPE; GENE FREQUENCY; GENE LOCUS; GENETIC POLYMORPHISM; HUMAN; HUMAN EXPERIMENT; NORMAL HUMAN; POPULATION RESEARCH; SPAIN; TANDEM REPEAT;

EID: 0031005940     PISSN: 00015652     EISSN: 14230062     Source Type: Journal    
DOI: 10.1159/000154401     Document Type: Article

References (47)

1. Mourant AE: Blood Relations. London, Oxford University Press. 1983.
2. Aguirre AI, Vicario A, Mazón LI, Martinez de Pancorbo MA, Estomba A, Lostao CM: Acid phosphatase, adenosine/deaminase and esterase D polymorphisms in the Spanish Basque population. Hum Hered 1991:41:93-102.
3. Aguirre AI, Vicario A, Mazón LI, Martínez de Pancorbo MA, Arizti P, Estomba A, Lostao CM: AK1, PGD, GC, and HP frequencies in the Basque population: A review. Gene Geogr 1989:3:41-51.
4. Martin P, Garcia O, Alonso A, Al-barrán C, Aguirre A, Sancho M: HLA-DQA1 subtyping by PCR followed by a combined SSO/RFLP method of detection: Distribution of alleles and genotypes in two Spanish populations: in Bär W, Fiori A. Rossi U (eds): Advances in Forensic Hacmogcnctics. ed 5. Berlin. Springer. 1994, pp 533-535.
5. Esparza B, Pestoni C, Martin MD, Merino F, Carracedo A: Distribution of the HLA-DQAI polymorphism in the population of the Basque Country (Spain). Gene Gcogr 1995:9:53-58.
6. Manzano C, Aguirre AI, Madoz P, Ribo G, Osaba L, Moreno P, de la Rúa C: New contribution to the genetics of the Basques: Heterogeneity in the esterase D subtype distribution. Hum Hered 1993:43:219-222.
7. Cavalli-Sforza LL: The Basque population and ancient migrations. 2nd World Basque Congr. Munibe (An-tropol Arqueol) 1988:6(suppl): 129-137.
8. Aguirre A, Vicario A, Mazón LL, Eslomba A, Martinez de Pancorbo M, Arrieta-Picó V, Perez-Elortondo F, Lostao CM: Are the Basques a single and a unique population? Am.1 Hum Genet 1991:49:450-458.
9. Bertranpetit J, Cavalli-Sforza LL: A genetic reconstruction of the history of the population of the Iberian peninsula. Ann Hum Genet 1991:55: 51-67.
10. Edwards A, Civitcllo A, Hammond HA, Caskey CT: DNA typing and genetic mapping with trimcric and tetramerie tandem repeats. Am J Hum Genet 1991:49:746-756.
11. Kimpton C, Walton A, Gill P: A further tctranucleotide repeat polymorphism in the vWF gene. Hum Mol Genet 1992; 1:287.
12. Polymeropoulos MH, Rath DS, Xiao H, Merril CR: Telranucleotide repeat polymorphism at the human c-fes/fps proto-oncogene (FES). Nucleic Acids Res 1991; 19:4018.
13. Anker R, Steinbrueck T, Donis-Keller H: Tetranucleotide repeat polymorphism at the human lyroid peroxidase (hTPO) locus. Hum Mol Genet 1992:1:137.
14. Hammond HA, Jin L, Zhong Y, Caskey CTh, Chakraborty R: Evaluation of 13 short tandem repeat loci for use in personal identification applications. Am J Hunt Genet 1994: 55:175-189
15. Promega: Technical Manual No. TMD004: -Gene-Print’ STR Multiplex Systems’. Madison. Promega. 1994.
16. Bassam BJ, Caetano-Anolles G, Gresshol TPM: Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal Biochcnt 1991; 196: 80-83.
17. Sokal RR, Rohlf IJ: Biometry, ed 2. New York, Freeman. 1969.
18. Deka R, Chakraborty R, Ferrell RE: A population genetic study of six VNTR loci in three ethnically defined populations. Genomics 1991: 11:83-92.
19. Pascal O, Levayer T, Aubert D, Peneau A, Markey P, Moisan JP: French population data of 6 Amp FL's; in Bär W. Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics. ed 5. Berlin. Springer, 1994. pp 542-544.
20. Dupuy BM, Berg ES, Olaisen B: Four STRs in 300 Norwegians; in Bär W. Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics. ed 5. Berlin. Springer. 1994. pp 539- 541.
21. Martin P, Alonso A, Budowle B, Al-barrän C, García O, Sancho M: Spanish population data on 7 te-tramcric short tandem repeat loci. Int J Legal Med 1995;108:145-149.
22. Pucrs C, Lins AM, Sprecher CJ, Brinkmann B, Schuntm W: Analysis of polymorphic short tandem repeat loci using well-characterized allelic ladders; in: Proc 4th Int Symp on Human Identification, 1993. Madison. Promega. 1993. pp 161-172.
23. Alper B, Meyer E, Sehürenkamp M, Brinkmann B: HumFES/FPS and HumFI.JB: Turkish and German population data. Int J Legal Med 1995;108:93-95.
24. Klintschar M: Validation of the STR system FES/FPS for forensic purposes in an Austrian population sample. Int J Legal Med 1995:108: 162-164.
25. Sjerps M, van der Geest N, Pieron C, Gajadhar M, KJoosterman A: A Dutch population study of the STR loci HUMTHOI, HUMFES/FPS, HUMVWA31/I and HUMF13AI, conducted for forensic purposes. Int J Legal Med 1995:108:127-134.
26. Hochmeister MN, Budowle B, Schuntm JW, Sprecher CJ, Borer UV, Dimhofer R: Swiss population data and forensic efficiency values on 3 tetramerie short tandem repeat loci - HUMTHOI, TPOX, and CSFIPO - derived using a STR multiplex system. Int J Legal Med 1995:107:246-249.
27. Gusmäo L, Prata MJ, Amorim A: The STR system hPTO: Population and segregation data. Int J Legal Med 1995:108:167-169.
28. Luis JR, Caeiro B: Application of two STRs (VWA and TPO) to human population profiling: Survey in Galicia. Hum Biol 1995:67:789-795.
29. Edwards A, Hammond HA, Jin L, Caskey T, Chakraborty R: Genetic variation at five trimeric and te-trameric tandem repeat loci in four human population groups. Genomics 1992:12:241-253.
30. Pai AP, Jackson T, Pritchard DJ, Papiha SS: Population genetic studies of short tandem repeat loci (STRs): Efficiency in paternity testing: in Bär W, Fiori A, Rossi U (eds): Advances in Forensic Haemogeneties, ed 5. Berlin. Springer. 1994. pp 184-186.
31. Holgersson S, Karlsson JA, Kihlgren A, Rosen B, Savolainen P, Gyllensten U: Fluorescent-based typing of the two short tandem repeat loci HUMTH01 and HUMACTBP2: Reproducibility of size measurements and genetic variation in the Swedish population. Electrophoresis 1994;15:890-895.
32. Nelleman I.J, Moller A, Morling N: PCR typing of DNA fragments of the short tandem repeat (STR) HUMTHOI in Danes and Greenland Eskimos. Forensic Sei Int 1994; 68:45-51.
33. Lareu MV, Philips CP, Carracedo A, Lincoln PJ, Syndercombe D, Thomson JA: Investigation of the STR locus HUMTH01 using PCR and two electrophoresis formats: UK and Galician Caucasian population surveys and usefulness in paternity investigations. Forensic Sei Int 1994:66:41-52.
34. Tagliabracci A, Buscemi I, Cucurachi N, Giorgetti R, Ferrara SD: Suitability and efficiency of PCR systems in forensics; in Bär W. Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics, ed 5. Berlin. Springer. 1994. pp 387-389.
35. Furedi S, Woller J, Padar Z: Hungarian population data for the STR systems TI 101 and VWA. Int J Legal Med 1995:108:48-49.
36. Kratzer A, Gränacher A, Jamnicki M, Bär W: Swiss population data for 3 STR systems (SE33. HUMTHOI, D2IS11), HLA DQu and DI580: in Bär W. Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics. ed 5. Berlin. Springer. 1994. pp 515-517.
37. Schwartz DWM, Jung, EM, Krenek OR, Mayr WR: Typing for STR loci by electrophoresis on rchydratable polyacrylamide gels: Phenotype and allele frequencies of SE33 and TC11 in an Austrian population sample; in Bär W, Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics. cd 5. Berlin. Springer. 1994. pp 581-583.
38. Wiegand P, Budowle B, Rand S, Brinkmann B: Forensic validation of the STR systems SE33 and TC 11. Int J Legal Med 1993:105:315-320.
39. Lorente JA, Lorente M, Budowle B, Wilson M, Villanueva E: Analysis of the HUMTHOI allele frequencies in the Spanish population. J Forensic Sei 1994:39:1270-1274.
40. Alonso S, Castro A, Fernández I, Gómez de Cedrón M, Garcia-Orad A, Meyer E, Martínez de Pancorbo M: Population study of 3 S I R loci in the Basque Country (Northern Spain). Int J Legal Med 1995:107: 239-245.
41. Möller A, Wiegand P, Grüschow C, Seuchter SA, Baur MP, Brinkmann B: Population data and forensic efficiency values for the STR systems HumVWA, Hum MBP and Hum-FABP. Int J Legal Med 1994:106: 183-189.
42. Sajantila A. Pacck P. Lukka M. Sv-vanen AC, Nokclainen P. Sistonen P. Pellonen L. Budowle B: A microsatellite polymorphism in the von Willebrand factor gene: Comparison of the allele frequencies in different population samples and evaluation for forensic medicine. Forensic Sei Int 1994:68:91-102.
43. Hochmeister MN, Jung IM, Budowle B, Borer UV, Dirnhofer R: Swiss population data on three te-trameric short tandem repeat loci -VWA, HUMTH01, and FI3AI -derived using multiplex PCR and laser fluorescence detection, Int J Legal Med 1994:107:34-36.
44. Caeiro B, Luis J, Liste I: Genetic studies of a STR at the vWF locus and its application to individualisation; in Bär W, Fiori A, Rossi U (eds): Advances in Forensic Haemogenetics, ed 5, Berlin. Springer. 1994. pp 346-348.
45. Buscemi L, Tagliabracci A, Cucurachi N, Mencarclli R, Porro D, Giorgetti R, Ferrara SD: Allele frequencies of the vWA STR locus in Italy; in Bär W. Fiori A. Rossi U (eds): Advances in Forensic Haemogenetics, ed 5. Berlin. Springer. 1994, pp 475-477.
46. C'alafell F, Bertranpetit J: Principal component analysis of gene frequencies and the origin of Basques. Am J Phys Anthropol 1994:93:201-215.
47. Manzano C, Ortie JM, de la Rúa C: The ‘basqueness' of the Basques of Alava: A reappraisal from a multidisciplinary perspective. Am J Phys Anthropol 1996:99:249-258.