Comparative analysis of antibiotic resistance, immunofluorescent colony staining, and a transgenic marker (bioluminescence) for monitoring the environmental fate of a Rhizobacterium

Applied and Environmental Microbiology

Volumn 63, Issue 4, 1997, Pages 1617-1622

  Mahaffee, W F ^a,c   Bauske, E M ^a   Van Vuurde, J W L ^b   Van Der Wolf, J M ^b   Van Den Brink, M ^b   Kloepper, J W ^a  

^a AUBURN UNIVERSITY   (United States)

^b WAGENINGEN UNIVERSITY   (Netherlands)

^c HORTICULTURAL CROPS RESEARCH LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL COLONIZATION; BACTERIUM CULTURE; BIOLUMINESCENCE; ECOLOGY; GENETIC MARKER; GENETIC VARIABILITY; IMMUNOFLUORESCENCE; PHENOTYPE; PSEUDOMONAS FLUORESCENS;

BACTERIA (MICROORGANISMS); CUCUMIS SATIVUS; PSEUDOMONAS; PSEUDOMONAS FLUORESCENS; RHIZOBIUM;

EID: 0030991109     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.63.4.1617-1622.1997     Document Type: Article

References (31)

1. Barton, N. H. 1990. Pleiotropic models of quantitative variation. Genetics 124:773-782.
2. Bouzar, H., J. B. Jones, and N. C. Hodge. 1993. Differential characterization of Agrobacterium species using carbon-source utilization patterns and fatty acid profiles. Phytopathology 83:733-738.
3. Brockmen, F. J., L. B. Forse, D. F. Bezdicek, and J. K. Fredrickson. 1991. Impairment of transposon-induced mutants of Rhizobium leguminosarum. Soil Biol. Biochem. 23:861-867.
4. Bryson, V., and W. Szybalski. 1952. Microbial selection. Science 11:45-51.
5. Colwell, R. R., P. R. Brayton, D. J. Grimes, D. B. Roszak, S. A. Hug, and L. M. Palmer. 1985. Viable but nonculturable Vibrio cholerae and related pathogens in the environment: implications for release of genetically engineered micro-organisms. Bio/Technology 3:817-820.
6. Colwell, R. R., C. Somerville, I. Knight, and W. Straube. 1988. Detection and monitoring of genetically-engineered micro-organisms, p. 47-60. In M. Sussman, C. H. Collins, F. A. Skinner, and D. E. Stewart-Tull (ed.), The release of genetically-engineered micro-organisms. Academic Press Ltd., London, United Kingdom.
7. Compeau, G., B. J. Al-Achi, E. Platsouka, and S. B. Levy. 1988. Survival of rifampin-resistant mutants of Pseudomonas fluorescens and Pseudomonas putida in soil systems. Appl. Environ. Microbiol. 54:2432-2438.
8. Denny, T. P., F. W. Makini, and S. M. Brumbley. 1988. Characterization of Pseudomonas solanacearum Tn5 mutants deficient in extracellular polysaccharide. Mol. Plant-Microbe Interact. 1:215-223.
9. Drahos, D. J., B. C. Hemming, and S. McPherson. 1986. Tracking recombinant organisms in the environment: β-galactosidase as a selectable non-antibiotic marker for fluorescent pseudomonas. Bio/Technology 4:439-444.
10. Gray, T. R. G., and S. T. Williams. 1971. Methods of studying the ecology of soil microorganisms, p. 110-116. In T. R. G. Gray and S. T. Williams (ed.), Soil micro-organisms. Longman Group Ltd., New York, N.Y.
11. Josey, D. P., J. L. Beynon, A. W. B. Johnston, and J. U. E. Beringer. 1979. Strain identification in Rhizobium using intrinsic antibiotic resistance. J. Appl. Bacteriol. 46:343-350.
12. Kado, C. I., and S. T. Liu. 1981. Rapid procedure for detection and isolation of large and small plasmids. J. Bacteriol. 145:1365-1373.
13. Kloepper, J. W., and C. J. Beauchamp. 1992. A review of issues related to measuring colonization of plant roots by bacteria. Can. J. Microbiol. 38: 1212-1232.
14. Kluepfel, D. A. 1993. The behavior and tracking of bacteria in the rhizosphere. Annu. Rev. Phytopathol. 31:441-172.
15. Liu, L., J. W. Kloepper, and S. Tuzun. 1995. Induction of systemic resistance in cucumber by plant growth-promoting rhizobacteria: duration of protection and effect of host resistance on protection and root colonization. Phytopathology 85:1064-1068.
16. Mahaffee, W. F. 1996. Ecological studies of rhizobacteria, p. 75-93. Ph.D. dissertation. Auburn University, Auburn, Ala.
17. McInroy, J. A., G. Wei, G. Musson, and J. W. Kloepper. 1992. Evidence for possible masking of rifampicin-resistance phenotype of marked bacteria in planta. Phytopathology 82:1177. (Abstract.)
18. Mossel, D. A. A., and P. van Netten. 1984. Harmful effects of selective media on stressed micro-organisms: nature and remedies, p. 329-369. In M. H. E. Andrew and A. D. Russel (ed.), The revival of injured microbes. Academic Press Ltd., London, United Kingdom.
19. Pederson, J. C., and T. D. Leser. 1992. Survival of Enterobacter cloacae on leaves and in soil detected by immunofluorescence microscopy in comparison with selective plating. Microb. Releases 1:95-102.
20. Raaijmakers, J. M., W. Bitter, H. L. M. Punte, P. A. H. M. Bakker, P. J. Weisbeek, and B. Schippers. 1994. Siderophore receptor PupA as a marker to monitor wild-type Pseudomonas putida WCS358 in natural environments. Appl. Environ. Microbiol. 60:1184-1190.
21. Renwick, A., and D. G. Jones. 1985. A comparison of the fluorescent ELISA and antibiotic resistance identification techniques for use in ecological experiments with Rhizobium trifolii. J. Appl. Bacteriol. 58:199-206.
22. Sasser, M. 1990. "Tracking" a strain using the microbial identification system. Technical note 102. Microbial ID, Inc., Newark, Del.
23. Sasser, M. 1990. Identification of bacteria through fatty acid analysis, p. 199-204. In Z. Klement, K. Rudolph, and D. C. Sands (ed.), Methods in phytobacteriology. Akadèmiai Kiadó, Budapest, Hungary.
24. Shaw, J. J., F. Dane, D. Geiger, and J. W. Kloepper. 1992. Use of bioluminescence for detection of genetically engineered microorganisms released into the environment. Appl. Environ. Microbiol. 58:267-273.
25. Shaw, J. J., P. Rogowsky, T. J. Close, and C. I. Kado. 1987. Working with bacterial bioluminescence. Plant Mol. Biol. Rep. 5:267-273.
26. van Overbeek, L. S., J. D. van Elsas, J. T. Trevors, and M. E. Starodub. 1990. Long-term survival of and plasmid stability in Pseudomonas fluorescens and Klebsiella species and appearance of nonculturable cells in agricultural drainage water. Microb. Ecol. 19:239-249.
27. van Vuurde, J. W. L. 1987. New approach in detecting phytopathogenic bacteria by combined immunoisolation and immunoidentification assays. EPPO Bull. 17:139-148.
28. van Vuurde, J. W. L., and N. J. M. Roozen. 1990. Comparison of immunofluorescence colony-staining in media, selective isolation on pectate medium, ELISA, and immunofluorescence cell staining for detection of Erwinia carotovora subsp. atroseptica and E. chrysanthemi in cattle manure slurry. Neth. J. Plant Pathol. 96:75-89.
29. van Vuurde, J. W. L., and J. M. van der Wolf. 1995. The use of antibody techniques in soil. p. 452-457. In K. Alef and P. Nannipieri (ed.), Methods in applied soil microbiology and biochemistry. Academic Press, Inc., New York.
30. Wilson, M., and S. E. Lindow. 1992. Relationship of total viable and culturable cells in epiphytic populations of Pseudomonas syringae. Appl. Environ. Microbiol. 58:3908-3913.
31. Wollum, A. G. 1982. Cultural methods for soil microorganisms, p. 781-802. In A. L. Page, R. H. Miller, and D. R. Kenney (ed.), Methods of soil analysis. 2. Chemical and microbial properties. American Society of Agronomy, Inc., and Soil Science Society of America, Inc., Madison, Wis.