Molecular characterisation of the 3'-end of the astrovirus genome

Archives of Virology

Volumn 142, Issue 4, 1997, Pages 699-706

  Monceyron, C ^a   Grinde, B ^a   Jonassen, T O ^a  

^a NORWEGIAN INSTITUTE OF PUBLIC HEALTH   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; VIRUS RNA;

ARTICLE; CHEMISTRY; CLASSIFICATION; CONFORMATION; GENETICS; MAMASTROVIRUS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE HOMOLOGY; VIRUS GENOME;

BASE SEQUENCE; DNA, COMPLEMENTARY; GENOME, VIRAL; MAMASTROVIRUS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PHYLOGENY; RNA, VIRAL; SEQUENCE HOMOLOGY, NUCLEIC ACID;

ASTROVIRIDAE; CORONAVIRUS; HUMAN ASTROVIRUS; MIRIDAE;

EID: 0030981902     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050050112     Document Type: Article

References (19)

1. Boursnell MEG, Binns MM, Foulds IJ, Brown TDK (1985) Sequences of the nucleocapsid genes from two strains of avian infectious bronchitis virus. J Gen Virol 66: 573-580
2. Gait MJ, Karn J (1993) RNA recognition by the human immunodeficiency virus Tat and Rev proteins. Trends Biochem Sci 18: 255-259
3. James BD, Olsen GJ, Pace NR (1989) Phylogenetic comparative analysis of RNA secondary structure. Methods Enzymol 180: 227-239
4. Jiang B, Monroe SS, Koonin EV, Stine SE, Glass RI (1993) RNA sequence of astroviruses: distinctive genomic organization and a putative retrovirus-like ribosomal frameshifting signal that directs the viral replicase synthesis. Proc Natl Acad Sci USA 90: 10 539-10 543
5. Jonassen TØ, Kjeldsberg E, Grinde B (1993) Detection of human astrovirus serotype 1 by the polymerase chain reaction. J Virol Methods 44: 83-88
6. Jonassen TØ, Monceyron C, Lee TW, Kurtz JB, Grinde B (1995) Detection of all serotypes of human astrovirus by the polymerase chain reaction. J Virol Methods 52: 327-334
7. Kottier SA, Cavanagh D, Britton P (1995) Experimental evidence of recombination in coronavirus infectious bronchitis virus. Virology 213: 569-580
8. Lai MMC (1992) RNA recombination in animal and plant viruses. Microbiol Rev 56: 61-79
9. Lee TW, Kurtz JB (1994) Prevalence of human astrovirus serotypes in the Oxford region 1976-92: with evidence for two new serotypes. Epidemiol Infect 112: 187-193
10. Lewis TL, Greenberg HB, Herrmann JE, Smith LS, Matsui SM (1994) Analysis of astrovirus serotype 1 RNA, identification of the viral RNA-dependent RNA polymerase motif, and expression of a viral structural protein. J Virol 68: 77-83
11. Madeley CR, Cosgrove BP (1975) 28 nm particles in faeces in infantile gastroenteritis. Lancet ii: 451-452
12. Major ME, Eglin RP, Easton AJ (1992) 3′ terminal nucleotide sequence of human astrovirus type 1 and routine detection of astrovirus nucleic acid and antigens. J Virol Methods 39: 217-225
13. Makino S, Keck JG, Stohlman SA, Lai MM (1986) High-frequency RNA recombination of murine coronaviruses. J Virol 57: 729-737
14. Monroe SS, Jiang B, Stine SE, Koopmans M, Glass RI (1993) Subgenomic RNA sequence of human astrovirus supports classification of astroviridae as a new family of RNA viruses. J Virol 67: 3 611-3 614
15. Monroe SS, Stine SE, Gorelkin L, Herrmann JE, Blacklow NR, Glass RI (1991) Temporal synthesis of proteins and RNAs during human astrovirus infection of cultured cells. J Virol 65: 641-648
16. Noel JS, Lee TW, Kurtz JB, Glass RI, Monroe SS (1995) Typing of human astroviruses from clinical isolates by enzyme immunoassay and nucleotide sequencing. J Clin Microbiol 33: 797-801
17. Pilipenko EV, Maslova SA, Sinyakov AN, Agol VI (1992) Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: a proposal for the existence of tRNA-like terminal structures. Nucleic Acids Res 20: 1 739-1 745
18. Willcocks MM, Brown TDK, Madeley CR, Carter MJ (1994) The complete sequence of a human astrovirus. J Gen Virol 75: 1 785-1 788
19. Willcocks MM, Carter MJ (1992) The 3′ terminal sequence of a human astrovirus. Arch Virol 124: 279-289