Microsatellites and a single-nucleotide polymorphism differentiate apparent amylose classes in an extended pedigree of US rice germ plasm

Theoretical and Applied Genetics

Volumn 94, Issue 6-7, 1997, Pages 773-781

  Ayres, N M ^a   McClung, A M ^b   Larkin, P D ^a   Bligh, H F J ^c   Jones, C A ^c   Park, W D ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c UNIVERSITY OF NOTTINGHAM   (United Kingdom)

Author keywords

Apparent amylose; Microsatellite; Rice; RNA splicing; Waxy

Indexed keywords

EID: 0030980792     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050477     Document Type: Article

References (32)

1. Asaoka M, Okuno K, Yano M, Fuwa H (1993) Effects of shrunken and other mutations on the properties of rice endosperm starch. Starch 45 : 385-387
2. Bligh HFJ, Till RI, Jones CA (1995) A microsatellite sequence closely linked to the waxy gene of Oryza sativa. Euphytica 86 : 83-85
3. Bollich CN, Webb BD (1973) Inheritance of amylose in two hybrid populations of rice. Cereal Chem 50 : 631-636
4. Delwiche SR, Bean MM, Miller RE, Webb BD, Williams PC (1995) Apparent amylose content of milled rice by near-infrared reflectance spectrophotometry. Cereal Chem 72 : 182-187
5. Dilday RH (1990) Contribution of ancestral lines in the development of new cultivars of rice. Crop Sci: 30 : 905-911
6. Goodall GJ, Filipowicz W (1991) Different effects of intron nucleotide composition and secondary structure on pre-mRN A splicing in monocot and dicot plants. EMBO J 10 : 2635-2644
7. Johnston TH (1958) Registration of rice varieties. Agro J 50 : 694-700
8. Juliano BO (1971) A simplified assay for milled-rice amylose. Cereal Sci Today 16 : 334-340
9. Juliano BO (1985) Criteria and test for rice grain quality. In: Juliano BO (ed) Rice chemistry and technology. American Association of Cereal Chemists, Inc. St. Paul, Minnesota, USA, pp 443-513
10. Juliano BO, Perez CM, Blakeney AB, Castillo T, Kongseree N, Laignelet B, Lapis ET, Murty VVS, Paule CM, Webb BD (1981) International cooperative testing on the amylose content of milled rice. Starch 33 : 157-162
11. Juliano BO, Perez CM, Kaushik R, Khush GS (1990) Some grain properties of IR36-based starch mutants. Starch 42 : 256-260
12. Lander ES, Schork NJ (1994) Genetic dissection of complex traits. Science 265 : 2037-2048
13. Li YZ, Ma HM, Zhang JL, Wang ZY, Hong MM (1995) Effects of the first intron of rice waxy gene on the expression of foreign genes in rice and tobacco protoplasts. Plant Sci 108 : 181-190
14. Linscombe SD, Jodari F, McKenzie KS, Bollich PK, Groth DE, White LM, Dunand RT, Sanders DE (1995) Registration of Jodon rice. Crop Sci 35 : 1217-1218
15. MacDonald FD, Preiss J (1985) Partial purification and characterization of granule-bound starch synthases from normal and waxy maize. Plant Physiol 78 : 849-852
16. McKenzie KS, Rutger JN (1983) Genetic analysis of amylose content, alkali spreading score and grain dimensions in rice. Crop Sci 23 : 306-313
17. Paul E, Goto M, McCouch SR (1995) RiceGenes, an information system for rice research. Probe 4 : 26-27
18. Paul, E, Goto M, McCouch SM (Curators) (1996) RiceGenes. Database accessible via World Wide Webb, http://probe.nalusda.gov.8300
19. Pooni HS, Kumar I, Khush GS (1993a) Genetical control of amylose content in a diallel set of rice crosses. Heredity 71 : 603-613
20. Pooni HS, Kumar I, Khush GS (1993 b) Genetical control of amylose content in selected crosses of indica rice. Heredity 70 : 269-280
21. Sano Y (1984) Differential regulation of waxy gene expression in rice endosperm. Theor Appl Genet 68 : 467-473
22. Sano Y, Maekawa M, Kikuchi H (1985) Temperature effects on the Wx protein level and amylose content in the endosperm of rice. J of Hered 76 : 221-222
23. Sano Y, Katsumata M, Okuno K (1986) Genetic studies of speciation in cultivated rice. 5. inter- and intra-specific differentiation in the waxy gene expression in rice. Euphytica 35 : 1-9
24. Shure M, Wessler S, Federoff N (1983) Molecular identification and isolation of the Waxy locus in maize. Cell 35 : 225-233
25. Stansel JW (1965) Influence of heredity and environment on endosperm characteristics of rice (Oryza sativa L.) PhD thesis, Purdue University, University Microfilms, Ann Arbor, Michigan (Diss abstr 27 : 48B)
26. Takeda Y, Hizukuri S, Juliano BO (1987) Structure of rice amylopectins with low and high affinities for iodine. Carbohydr Res 168 : 79-88
27. Tseng ST, Carnahan HL, Johnson CW, Oster JJ, Hill JE, Scardaci SC (1984) Registration of L-202 rice. Crop Sci 24 : 1213-1214
28. Wang ZY, Zheng FQ, Shen GZ, Gao JP, Snustad DP, Li MG, Zhang JL, Hong MM (1995) The amylose content in rice endosperm is related to the post-transcriptional regulation of the waxy gene. The Plant Jour 7 : 613-622
29. Webb BD (1985) Criteria of rice quality in the United States. In: Juliano BO (ed) Rice chemistry and technology. American Association of Cereal Chemists, Inc. St. Paul, Minnesota, USA, pp 403-442
30. Williams VR, Wu T, Tsai HY. Bates HG (1958) Varietal differences in amylose content of rice starch. J Agric Food Chem 6 : 47-48
31. Wu K-S, Tanksley SD (1993) Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241 : 225-235
32. Yano M, Okuno K, Kawakami J, Satoh H, Omura T (1985) High-amylose mutants of rice, Oryza sativa L. Theor Appl Genet 69 : 253-257