메뉴 건너뛰기




Volumn 179, Issue 11, 1997, Pages 3528-3533

In vivo supercoiling of plasmid and chromosomal DNA in an Escherichia coli hns mutant

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA FRAGMENT; DNA TOPOISOMERASE;

EID: 0030977555     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.179.11.3528-3533.1997     Document Type: Article
Times cited : (43)

References (45)
  • 1
    • 0023117639 scopus 로고
    • Use of site-specific recombination as a probe of DNA structure and metabolism in vivo
    • Bliska, J. B., and N. R. Cozzarelli. 1987. Use of site-specific recombination as a probe of DNA structure and metabolism in vivo. J. Mol. Biol. 194:205-218.
    • (1987) J. Mol. Biol. , vol.194 , pp. 205-218
    • Bliska, J.B.1    Cozzarelli, N.R.2
  • 2
    • 0026782093 scopus 로고
    • Activity of a plasmid-borne leu-500 promoter depends on the transcription and translation of an adjacent gene
    • Chen, D., R. Bowater, C. J. Dorman, and D. M. J. Lilley. 1992. Activity of a plasmid-borne leu-500 promoter depends on the transcription and translation of an adjacent gene. Proc. Natl. Acad. Sci. USA 89:8784-8788.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 8784-8788
    • Chen, D.1    Bowater, R.2    Dorman, C.J.3    Lilley, D.M.J.4
  • 3
    • 0028322097 scopus 로고
    • Topological promoter coupling in Esherichia coli: ΔtopA-dependent activation of the leu-500 promoter on a plasmid
    • Chen, D., R. Bowater, and D. M. J. Lilley. 1994. Topological promoter coupling in Esherichia coli: ΔtopA-dependent activation of the leu-500 promoter on a plasmid. J. Bacteriol. 176:3757-3764.
    • (1994) J. Bacteriol. , vol.176 , pp. 3757-3764
    • Chen, D.1    Bowater, R.2    Lilley, D.M.J.3
  • 4
    • 0024722506 scopus 로고
    • Induction of anaerobic gene expression in Rhodobacter capsulatus is not accompanied by a local change in chromosomal supercoiling as measured by a novel assay
    • Cook, D. N., G. A. Armstrong, and J. E. Hearst. 1989. Induction of anaerobic gene expression in Rhodobacter capsulatus is not accompanied by a local change in chromosomal supercoiling as measured by a novel assay. J. Bacteriol. 171:4836-4843.
    • (1989) J. Bacteriol. , vol.171 , pp. 4836-4843
    • Cook, D.N.1    Armstrong, G.A.2    Hearst, J.E.3
  • 5
    • 0026674213 scopus 로고
    • Role of the histone-like proteins OsmZ and HU in homologous recombination
    • Dri, A. M., P. L. Moreau, and J. Rouvière-Yaniv. 1992. Role of the histone-like proteins OsmZ and HU in homologous recombination. Gene 120:11-16.
    • (1992) Gene , vol.120 , pp. 11-16
    • Dri, A.M.1    Moreau, P.L.2    Rouvière-Yaniv, J.3
  • 6
    • 0026555506 scopus 로고
    • Control of bacterial DNA supercoiling
    • Drlica, K. 1992. Control of bacterial DNA supercoiling. Mol. Microbiol. 6:425-433.
    • (1992) Mol. Microbiol. , vol.6 , pp. 425-433
    • Drlica, K.1
  • 7
    • 0023413620 scopus 로고
    • Histone-like proteins of bacteria
    • Drlica, K., and J. Rouvière-Yaniv. 1987. Histone-like proteins of bacteria. Microbiol. Rev. 51:301-319.
    • (1987) Microbiol. Rev. , vol.51 , pp. 301-319
    • Drlica, K.1    Rouvière-Yaniv, J.2
  • 8
    • 0024095858 scopus 로고
    • Rifampin and rpoB mutation can alter DNA supercoiling in Escherichia coli
    • Drlica, K., R. J. Franco, and T. R. Steck. 1988. Rifampin and rpoB mutation can alter DNA supercoiling in Escherichia coli. J. Bacteriol. 170:4983-4985.
    • (1988) J. Bacteriol. , vol.170 , pp. 4983-4985
    • Drlica, K.1    Franco, R.J.2    Steck, T.R.3
  • 10
    • 0023833060 scopus 로고
    • A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli
    • Higgins, C. F., C. J. Dorman, D. A. Stirling, L. Waddell, I. R. Booth, G. May, and E. Bremer. 1988. A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli. Cell 52:569-584.
    • (1988) Cell , vol.52 , pp. 569-584
    • Higgins, C.F.1    Dorman, C.J.2    Stirling, D.A.3    Waddell, L.4    Booth, I.R.5    May, G.6    Bremer, E.7
  • 11
    • 0025630517 scopus 로고
    • Protein H1: A role for chromatin structure in the regulation of bacterial gene expression and virulence?
    • Higgins, C. F., J. C. Hinton, C. S. Hulton, T. Owen-Hughes, G. D. Pavitt, and A. Seirafi. 1990. Protein H1: a role for chromatin structure in the regulation of bacterial gene expression and virulence? Mol. Microbiol. 4:2007-2012.
    • (1990) Mol. Microbiol. , vol.4 , pp. 2007-2012
    • Higgins, C.F.1    Hinton, J.C.2    Hulton, C.S.3    Owen-Hughes, T.4    Pavitt, G.D.5    Seirafi, A.6
  • 12
    • 0026661849 scopus 로고
    • Expression and mutational analysis of the nucleoid-associated protein H-NS of Salmonella typhimurium
    • Hinton, J. C., D. S. Santos, A. Seirafi, C. S. Hulton, G. D. Pavitt, and C. F. Higgins. 1992. Expression and mutational analysis of the nucleoid-associated protein H-NS of Salmonella typhimurium. Mol. Microbiol. 6:2327-2337.
    • (1992) Mol. Microbiol. , vol.6 , pp. 2327-2337
    • Hinton, J.C.1    Santos, D.S.2    Seirafi, A.3    Hulton, C.S.4    Pavitt, G.D.5    Higgins, C.F.6
  • 14
    • 0028820166 scopus 로고
    • DNA twist, flexibility and transcription of the osmoregulated proU promoter of Salmonella typhimurium
    • Jordi, B. J. A. M., T. Owen-Hughes, C. S. Hulton, and C. F. Higgins. 1995. DNA twist, flexibility and transcription of the osmoregulated proU promoter of Salmonella typhimurium. EMBO J. 14:5690-5700.
    • (1995) EMBO J. , vol.14 , pp. 5690-5700
    • Jordi, B.J.A.M.1    Owen-Hughes, T.2    Hulton, C.S.3    Higgins, C.F.4
  • 16
    • 0025067388 scopus 로고
    • Mutations in the bglY gene increase the frequency of spontaneous deletions in Escherichia coli K-12
    • Lejeune, P., and A. Danchin. 1990. Mutations in the bglY gene increase the frequency of spontaneous deletions in Escherichia coli K-12. Proc. Natl. Acad. Sci. USA 87:360-363.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 360-363
    • Lejeune, P.1    Danchin, A.2
  • 17
    • 0023043162 scopus 로고
    • Bacterial chromatin: A new twist to an old story
    • Lilley, D. M. J. 1986. Bacterial chromatin: a new twist to an old story. Nature 320:14-15.
    • (1986) Nature , vol.320 , pp. 14-15
    • Lilley, D.M.J.1
  • 18
    • 0023433855 scopus 로고
    • Supercoiling of the DNA template during transcription
    • Liu, L. F., and J. C. Wang. 1987. Supercoiling of the DNA template during transcription. Proc. Natl. Acad. Sci. USA 84:7024-7027.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 7024-7027
    • Liu, L.F.1    Wang, J.C.2
  • 19
    • 0024563782 scopus 로고
    • Formation of supercoiling domains in plasmid pBR322
    • Lodge, J. K., T. Kazic, and D. E. Berg. 1989. Formation of supercoiling domains in plasmid pBR322. J. Bacteriol. 171:2181-2187.
    • (1989) J. Bacteriol. , vol.171 , pp. 2181-2187
    • Lodge, J.K.1    Kazic, T.2    Berg, D.E.3
  • 20
    • 0027467896 scopus 로고
    • Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: A mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase I
    • Lynch, A. S., and J. C. Wang. 1993. Anchoring of DNA to the bacterial cytoplasmic membrane through cotranscriptional synthesis of polypeptides encoding membrane proteins or proteins for export: a mechanism of plasmid hypernegative supercoiling in mutants deficient in DNA topoisomerase I. J. Bacteriol. 175:1645-1655.
    • (1993) J. Bacteriol. , vol.175 , pp. 1645-1655
    • Lynch, A.S.1    Wang, J.C.2
  • 21
    • 0025123398 scopus 로고
    • The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid
    • May, G., P. Dersch, M. Haardt, A. Middendorf, and E. Bremer. 1990. The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid. Mol. Gen. Genet. 224:81-90.
    • (1990) Mol. Gen. Genet. , vol.224 , pp. 81-90
    • May, G.1    Dersch, P.2    Haardt, M.3    Middendorf, A.4    Bremer, E.5
  • 22
    • 0025740223 scopus 로고
    • mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo
    • McLaren, R. S., S. F. Newbury, G. S. Dance, H. C. Causton, and C. F. Higgins. 1991. mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo. J. Mol. Biol. 221:81-95.
    • (1991) J. Mol. Biol. , vol.221 , pp. 81-95
    • McLaren, R.S.1    Newbury, S.F.2    Dance, G.S.3    Causton, H.C.4    Higgins, C.F.5
  • 24
    • 0027999001 scopus 로고
    • Effects of salt and temperature on plasmid topology in the halophilic archaeon Haloferax volcanii
    • Mojica, F. J. M., F. Charbonnier, G. Juez, F. Rodríguez-Valera, and P. Forterre. 1994. Effects of salt and temperature on plasmid topology in the halophilic archaeon Haloferax volcanii. J. Bacteriol. 176:4966-4973.
    • (1994) J. Bacteriol. , vol.176 , pp. 4966-4973
    • Mojica, F.J.M.1    Charbonnier, F.2    Juez, G.3    Rodríguez-Valera, F.4    Forterre, P.5
  • 25
    • 0029799816 scopus 로고    scopus 로고
    • Localised domains of DNA supercoiling: Topological coupling between promoters
    • Mojica, F. J. M., and C. F. Higgins. 1997. Localised domains of DNA supercoiling: topological coupling between promoters. Mol. Microbiol. 22: 919-928.
    • (1997) Mol. Microbiol. , vol.22 , pp. 919-928
    • Mojica, F.J.M.1    Higgins, C.F.2
  • 26
    • 0024407364 scopus 로고
    • An overlap between osmotic and anaerobic stress responses: A potential role for DNA supercoiling in the coordinate regulation of gene expression
    • Ni Bhriaiu, N., C. J. Dorman, and C. F. Higgins. 1989. An overlap between osmotic and anaerobic stress responses: a potential role for DNA supercoiling in the coordinate regulation of gene expression. Mol. Microbiol. 3:933-942.
    • (1989) Mol. Microbiol. , vol.3 , pp. 933-942
    • Ni Bhriaiu, N.1    Dorman, C.J.2    Higgins, C.F.3
  • 27
    • 0026754366 scopus 로고
    • The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression
    • Owen-Hughes, T., G. D. Pavitt, D. S. Santos, J. M. Sidebotham, C. S. Hulton, J. C. Hinton, and C. F. Higgins. 1992. The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression. Cell 71:255-265.
    • (1992) Cell , vol.71 , pp. 255-265
    • Owen-Hughes, T.1    Pavitt, G.D.2    Santos, D.S.3    Sidebotham, J.M.4    Hulton, C.S.5    Hinton, J.C.6    Higgins, C.F.7
  • 28
    • 0027524617 scopus 로고
    • Chromosomal domains of supercoiling in Salmonella typhimurium
    • Pavitt, G. D., and C. F. Higgins. 1993. Chromosomal domains of supercoiling in Salmonella typhimurium. Mol. Microbiol. 10:685-696.
    • (1993) Mol. Microbiol. , vol.10 , pp. 685-696
    • Pavitt, G.D.1    Higgins, C.F.2
  • 29
    • 0022348492 scopus 로고
    • DNA supercoiling and supression of the leu-500 promoter mutation
    • Pruss, G. J., and K. Drlica. 1985. DNA supercoiling and supression of the leu-500 promoter mutation. J. Bacteriol. 164:947-949.
    • (1985) J. Bacteriol. , vol.164 , pp. 947-949
    • Pruss, G.J.1    Drlica, K.2
  • 30
    • 0020426111 scopus 로고
    • Escherichia coli DNA topoisomerase I mutants: Increased supercoiling is corrected by mutations near gyrase genes
    • Pruss, G. J., S. H. Manes, and K. Drlica. 1982. Escherichia coli DNA topoisomerase I mutants: increased supercoiling is corrected by mutations near gyrase genes. Cell 31:35-42.
    • (1982) Cell , vol.31 , pp. 35-42
    • Pruss, G.J.1    Manes, S.H.2    Drlica, K.3
  • 31
    • 2642672756 scopus 로고
    • Topoisomerase I mutants: The gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling
    • Pruss, G. J., and K. Drlica. 1986. Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling. Proc. Natl. Acad. Sci. USA 83:8952-8956.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 8952-8956
    • Pruss, G.J.1    Drlica, K.2
  • 32
    • 0029922992 scopus 로고    scopus 로고
    • A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
    • Py, B., C. F. Higgins, H. M. Krisch, and A. J. Carpousis. 1996. A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381:169-172.
    • (1996) Nature , vol.381 , pp. 169-172
    • Py, B.1    Higgins, C.F.2    Krisch, H.M.3    Carpousis, A.J.4
  • 33
    • 0024975168 scopus 로고
    • Stabilization of Z-DNA in vivo by localized supercoiling
    • Rahmouni, A. R., and R. D. Wells. 1989. Stabilization of Z-DNA in vivo by localized supercoiling. Science 246:358-363.
    • (1989) Science , vol.246 , pp. 358-363
    • Rahmouni, A.R.1    Wells, R.D.2
  • 34
    • 0021855188 scopus 로고
    • Genetic analysis of mutations that compensate for loss of Escherichia coli DNA topoisomerase I
    • Raji, A., D. J. Zabel, C. S. Laufer, and R. E. Depew. 1985. Genetic analysis of mutations that compensate for loss of Escherichia coli DNA topoisomerase I. J. Bacteriol. 162:1173-1179.
    • (1985) J. Bacteriol. , vol.162 , pp. 1173-1179
    • Raji, A.1    Zabel, D.J.2    Laufer, C.S.3    Depew, R.E.4
  • 35
    • 0022432484 scopus 로고
    • Rapid transfer of DNA from agarose gels to nylon membranes
    • Reed, K. C., and D. A. Mann. 1985. Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res. 13:7207-7221.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 7207-7221
    • Reed, K.C.1    Mann, D.A.2
  • 36
    • 0024026805 scopus 로고
    • DNA supcrcoiling and the leu-500 promoter mutation of Salmonella typhimurium
    • Richardson, S. M., C. F. Higgins, and D. M. J. Lilley. 1988. DNA supcrcoiling and the leu-500 promoter mutation of Salmonella typhimurium. EMBO J. 7:1863-1869.
    • (1988) EMBO J. , vol.7 , pp. 1863-1869
    • Richardson, S.M.1    Higgins, C.F.2    Lilley, D.M.J.3
  • 38
    • 0018962604 scopus 로고
    • Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: Analogous measurements in insect and human cells
    • Sinden, R. R., J. O. Carlson, and D. E. Pettijohn. 1980. Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: analogous measurements in insect and human cells. Cell 21:773-783.
    • (1980) Cell , vol.21 , pp. 773-783
    • Sinden, R.R.1    Carlson, J.O.2    Pettijohn, D.E.3
  • 39
    • 0343240577 scopus 로고
    • Chromosomes in living Escherichia coli cells are segregated into domains ot supercoiling
    • Sinden, R. R., and D. E. Pettijohn. 1981. Chromosomes in living Escherichia coli cells are segregated into domains ot supercoiling. Proc. Natl. Acad. Sci. USA 78:224-228.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 224-228
    • Sinden, R.R.1    Pettijohn, D.E.2
  • 40
    • 0026787850 scopus 로고
    • Analysis of DNA structure in viva using psoralen photobinding: Measurement of supercoiling, topological domains, and DNA-protein interactions
    • Sinden, R. R., and D. W. Ussery. 1992. Analysis of DNA structure in viva using psoralen photobinding: measurement of supercoiling, topological domains, and DNA-protein interactions. Methods Enzymol. 212:319-335.
    • (1992) Methods Enzymol. , vol.212 , pp. 319-335
    • Sinden, R.R.1    Ussery, D.W.2
  • 41
    • 0024409996 scopus 로고
    • Molecular characterization of the proU loci of Salmonella typhimurium and Escherichia coli encoding osmoregulated glycine betaine transport systems
    • Stirling, D. A., C. S. J. Hulton, L. Waddell, S. F. Park, G. S. Stewart, I. R. Booth, and C. F. Higgins. 1989. Molecular characterization of the proU loci of Salmonella typhimurium and Escherichia coli encoding osmoregulated glycine betaine transport systems. Mol. Microbiol. 3:1025-1038.
    • (1989) Mol. Microbiol. , vol.3 , pp. 1025-1038
    • Stirling, D.A.1    Hulton, C.S.J.2    Waddell, L.3    Park, S.F.4    Stewart, G.S.5    Booth, I.R.6    Higgins, C.F.7
  • 43
    • 0015506478 scopus 로고
    • On the structure of the folded chromosome of Escherichia coli
    • Worcel, A., and E. Burgi. 1972. On the structure of the folded chromosome of Escherichia coli. J. Mol. Biol. 71:127-147.
    • (1972) J. Mol. Biol. , vol.71 , pp. 127-147
    • Worcel, A.1    Burgi, E.2
  • 44
    • 0026250129 scopus 로고
    • Molecular analysis of the Escherichia coli hns gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences
    • Yamada, H., T. Yoshida, K. Tanaka, C. Sasakawa, and T. Mizuno. 1991. Molecular analysis of the Escherichia coli hns gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences. Mol. Gen. Genet. 230:332-336.
    • (1991) Mol. Gen. Genet. , vol.230 , pp. 332-336
    • Yamada, H.1    Yoshida, T.2    Tanaka, K.3    Sasakawa, C.4    Mizuno, T.5
  • 45
    • 0025870925 scopus 로고
    • Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells
    • Zheng, G. X., T. Kochel, R. W. Hoepfner, S. E. Timmons, and R. R. Sinden. 1991. Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells. J. Mol. Biol. 221:107-122.
    • (1991) J. Mol. Biol. , vol.221 , pp. 107-122
    • Zheng, G.X.1    Kochel, T.2    Hoepfner, R.W.3    Timmons, S.E.4    Sinden, R.R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.