Role of the coat protein-RNA interaction in the life cycle of bacteriophage MS2

Molecular and General Genetics

Volumn 254, Issue 4, 1997, Pages 358-364

  Peabody, D S ^a  

^a UNIVERSITY OF NEW MEXICO SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COAT PROTEIN; MUTANT PROTEIN; RNA DIRECTED RNA POLYMERASE; VIRUS RNA;

ARTICLE; CONTROLLED STUDY; LIFE CYCLE; MS2 VIRUS; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; OPERATOR GENE; PRIORITY JOURNAL; PROTEIN RNA BINDING; PROTEIN SYNTHESIS; RECOMBINANT GENE; REVERTANT; START CODON; VIRUS REPLICATION;

BLOTTING, WESTERN; CAPSID; CAPSID PROTEINS; CLONING, MOLECULAR; DNA, COMPLEMENTARY; LEVIVIRUS; MUTATION; NUCLEIC ACID CONFORMATION; OPERATOR REGIONS (GENETICS); PLAQUE ASSAY; PLASMIDS; PROTEIN BIOSYNTHESIS; RECOMBINANT FUSION PROTEINS; RNA REPLICASE; RNA, VIRAL; RNA-BINDING PROTEINS;

EID: 0030968219     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380050427     Document Type: Article

References (36)

1. Belin D, Hedgpeth J, Selzer GB, Epstein RH (1979) Temperature-sensitive mutation in the initiation codon of the rIIB gene of bacteriophage T4. Proc Natl Acad Sci USA 76:700-704
2. Bernardi A.. Spahr PF (1972) Nucleotide sequence at the binding site for coat protein on RNA of bacteriophage R17. Proc Natl Acad Sci USA 69:3033-3037
3. Beckett D, Uhlenbeck OC (1988) Ribonucleoprotein complexes of R17 coat protein and a translational operator analog. J Mol Biol 204:927-938
4. Berkhout B, van Duin J (1985) Mechanism of translational coupling between coat protein and replicase genes of RNA bacteriophage MS2. Nucleic Acids Res 13:6955-6967
5. Burnette WN (1981) "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate-polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A. Anal Biochem 112:195-203
6. Duvanloo P, Rosenberg AH, Dunn JJ, Studier FW (1984) Cloning and expression of the gene for bacteriophage T7 RNA polymerase. Proc Natl Acad Sci USA 81:2035-2039
7. de Smit MH, van Duin J (1990) Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis. Proc Natl Acad Sci USA 87:7668-7672
8. de Smit MH, van Duin J (1993) Translational initiation at the coat-protein gene of phage MS2: native upstream RNA relieves inhibition by local secondary structure. Mol Microbiol 9:1079-1088
9. de Smit MH, van Duin J (1994a) Control of translation by mRNA secondary structure in Escherichia coli. J Mol Biol 244:144-150
10. de Smit MH, van Duin J (1994b) Translational initiation on structured messengers: another role for the Shine-Dalgarno interaction. J Mol Biol 235:173-184
11. Domingo E. Sabo D, Taniguchi T, Weissmann C (1978) Nucleotide sequence heterogeneity of an RNA phage population. Cell 13:735-744
12. Kunkel TA, Roberts JD, Zakour RA (1987) Rapid and efficient site-specific mutagenesis without phenotypic selection. Meth Enzymol 154:367-3381
13. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
14. Lim F, Peabody DS (1994) Mutations that increase the affinity of a translational repressor for RNA. Nucleic Acids Res 2:3748-3752
15. Lim F, Spingola M, Peabody DS (1994) Altering the RNA-binding specificity of a translational repressor. J Biol Chem 269:9006-9010
16. Lodish HF (1968a) Bacteriophage f2 RNA: control of translation and gene order. Nature 220:345-350
17. Lodish HF (1968b) Polar effects of an amber mutation in f2 bacteriophage. J Mol Biol 32:47-58
18. Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
19. Min Jou W, Haegman G, Ysegaert M, Fiers W (1972) Nucleotide sequence coding for the bacteriophage MS2 coat protein. Nature 237:82-88
20. Olsthoorn RC, Licis N, van Duin J (1994) Leeway and constraints in the forced evolution of a regulatory RNA helix. EMBO J 13:2660-2668
21. Olsthoorn RCL, Zoog S, van Duin J (1995) Coevolution of RNA helix stability and Shine-Dalgarno complementarity in a translational start region. Mol Microbiol 15:333-339
22. Peabody DS (1990) Translational repression by bacteriophage MS2 coat protein expressed from a plasmid: a system for genetic dissection of a protein-RNA interaction. J Biol Chem 265:5684-5689
23. Peabody DS (1993) The RNA-binding site of bacteriophage MS2 coat protein. EMBO J 12:595-600
24. Peabody DS, Ely KR (1992) Control of translational repression by protein-protein interactions. Nucleic Acids Res 20:1649-1655
25. Pickett GG (1992) Ph.D. Thesis, University of New Mexico, Albuquerque
26. Pickett GG, Peabody DS (1993) Eneapsidation of heterologous RNAs by bacteriophage MS2 coat protein. Nucleic Acids Res 21:4621-4626
27. Roberts JW, Gussin GN (1967) Polarity in an amber mutant of bacteriophage R17. J Mol Biol 30:565-570
28. Romaniuk PJ, Lowary P, Wu H-N, Stormo G, Uhlenbeck OC (1987) RNA binding site of R17 coat protein. Biochemistry 26:1563-1568
29. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual (2nd edn). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
30. Shaklee PN (1990) Negative-strand RNA replication by Qβ and MS2 positive-strand RNA phage replicases. Virology 178:340-343
31. Smith BR, Schleif R (1978) Nucleotide sequence of the L-arabinose regulatory region of Escherichia coli K12. J Biol Chem 253:6931-6933
32. Taniguchi T, Weissmann C (1978) Site-directed mutations in the initiator region of the bacteriophage Qβ coat cistron and their effect on ribosome binding. J Mol Biol 118:533-565
33. Uhlenbeck OC, Carey J, Romaniuk PJ, Lowary PT, Beckett D (1983) Interaction of R17 coat protein with its RNA binding site for translational repression. J Biomol Str Dyn 1:539-552
34. Valegard K, Murray JB, Stockley PG, Stonehouse NJ, Liljas L (1994) Crystal structure of an RNA bacteriophage coat protein-operator complex. Nature 371:623-626
35. Vieira J, Messing J (1987) Production of single-stranded plasmid DNA. Meth Enzymol 153:3-11
36. Witherell GW, Gott JM, Uhlenbeck OC (1991) Specific interaction between RNA phage coat proteins and RNA. Prog Nucleic Acids Res Mol Biol 40:185-220