Analysis of the chromatin domain organisation around the plastocyanin gene reveals an MAR-specific sequence element in Arabidopsis thaliana

Nucleic Acids Research

Volumn 25, Issue 19, 1997, Pages 3904-3911

  Van Drunen, Cornelis M ^a   Oosterling, Rob W ^b   Keultjes, Gerbiënne M ^b   Weisbeek, Peter J ^b   Van Driel, Roel ^a   Smeekens, Sjef C M ^b  

^a UNIVERSITY OF AMSTERDAM   (Netherlands)

^b UTRECHT UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

PLASTOCYANIN;

ANIMAL CELL; ARABIDOPSIS; ARTICLE; CELL NUCLEUS MATRIX; CHROMATIN STRUCTURE; GENE; GENE SEQUENCE; GENOME; NONHUMAN; PRIORITY JOURNAL; RAT;

AMINO ACID SEQUENCE; ARABIDOPSIS; BASE SEQUENCE; CHROMATIN; CHROMOSOME MAPPING; CLONING, MOLECULAR; CONSENSUS SEQUENCE; DNA, PLANT; EVOLUTION, MOLECULAR; GENES, PLANT; GENOME, PLANT; NUCLEAR MATRIX; PLASTOCYANIN; REPETITIVE SEQUENCES, NUCLEIC ACID;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 0030963738     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.19.3904     Document Type: Article

References (70)

1. Paranjape, S.M., Kamakaka, R.T. and Kadonaga, J.T. (1994) Annu. Rev. Biochem. 63, 265-297.
2. Wolffe, A.P. (1992) FASEB J. 6, 3354-3361.
3. Laemmli, U.K., Kas, E., Poljak, L. and Adachi, Y. (1992) Curr. Opin. Genet. Dev. 2, 275-285.
4. Jackson, D.A., Dickinson, P. and Cook, P.R. (1990) EMBO J. 9, 567-571.
5. Garrard, W.T. (1990) In Eckstein, F. and Lilley, D.M.J. (eds), Nucleic Acids and Molecular Biology. Springer Verlag, Heidelberg. Vol. 4, pp. 163-175.
6. Razin, S.V., Hancock, R., Iarovaia, O., Westergaard, O., Gromova, I. and Georgiev, G.P. (1993) Cold Spring Harbor Symp. Quant. Biol. 58, 25-35.
7. Bode, J., Pucher, H.J. and Maass, K. (1986) Eur. J. Biochem. 158, 393-401.
8. Craddock, C.F., Vyas, P., Sharpe, J.A., Ayyub, H., Wood, W.G. and Higgs, D.R. (1995) EMBO J. 14, 1718-1726.
9. Amati, B. and Gasser, S.M. (1988) Cell 54, 967-978.
10. Amati, B. and Gasser, S.M. (1990) Mol. Cell. Biol. 10, 5442-5454.
11. Avramova, Z. and Bennetzen, J.L. (1993) Plant Mol. Biol. 22, 1135-1143.
12. Avramova, Z. and Paneva, E. (1992) Biochem. Biophys. Res. Commun. 182, 78-85.
13. Bode, J. and Maass, K. (1988) Biochemistry 27, 4706-4711.
14. Gasser, S.M. and Laemmli, U.K. (1986) Cell 46, 521-530.
15. Slatter, R.E., Dupree, P. and Gray, J.C. (1991) Plant Cell 3, 1239-1250.
16. Cockerill, P.N. and Garrard, W.T. (1986) FEBS Lett. 204, 5-7.
17. Breyne, P., Vanmontagu, M. and Gheysen, G. (1994) Transgen. Res. 3, 195-202.
18. Breyne, P., Vanmontagu, M., Depicker, A. and Gheysen, G. (1992) Plant Cell 4, 463-471.
19. Dietz, A., Kay, V., Schlake, T., Landsmann, J. and Bode, J. (1994) Nucleic Acids Res. 22, 2744-2751.
20. Klehr, D., Maass, K. and Bode, J. (1991) Biochemistry 30, 1264-1270.
21. Mlynarova, L., Jansen, R.C., Conner, A.J., Stiekema, W.J. and Nap, J.P. (1995) Plant Cell 7, 599-609.
22. Talbot, D., Descombes, P. and Schibler, U. (1994) Nucleic Acids Res. 22, 756-766.
23. Bode, J., Schlake, T., RiosRamirez, M., Mielke, C., Stengert, M., Kay, V. and Klehr-Wirth, D. (1995) In Berezney, R. and Jeon, K.W. (eds), Structural and Functional Organization of the Nuclear Matrix. Academic Press Inc., San Diego, Vol. 162A, pp. 389-454.
24. Cai, H. and Levine, V. (1995) Nature (London) 376, 533-536.
25. Dorsett, D. (1993) Genetics 134, 1135-1144.
26. Kellum, R. and Schedl, P. (1992) Mol. Cell. Biol. 12, 2424-2431.
27. Udvardy, A., Maine, E. and Schedl, P. (1985) J. Mol. Biol. 185, 341-358.
28. Spana, C., Harrison, D.A. and Corces, V.G. (1988) Genes Dev. 2, 1414-1423.
29. Chung, J.H., Whiteley, M. and Felsenfeld, G. (1993) Cell 74, 505-514.
30. Zhao, K., Hart, C.M. and Laemmli, U.K. (1995) Cell 81, 879-889.
31. Levy-Wilson, B. and Fortier, C. (1989) J. Biol. Chem. 264, 21196-21204.
32. Razin, S.V., Petrov, P. and Hancock, R. (1991) Proc. Natl. Acad. Sci. USA 88, 8515-8519.
33. Vandergeest, A.H.M., Hall, G.E., Spiker, S. and Hall, T.C. (1994) Plant J. 6, 413-423.
34. Mirkovitch, J., Gasser, S.M. and Laemmli, U.K. (1988) J. Mol. Biol. 200, 101-109.
35. Brun, C., Qi, D. and Miassod, R. (1990) Mol. Cell. Biol. 10, 5455-5463.
36. Brun, C., Surdej, P. and Miassod, R. (1993) Exp. Cell Res. 208, 104-114.
37. Surdej, P., Got, C., Rosset, R. and Miassod, R. (1990) Nucleic Acids Res. 18, 3713-3722.
38. Avramova, Z., Sanmiguel, P., Georgieva, E. and Bennetzen, J.L. (1995) Plant Cell 7, 1667-1680.
39. Fisscher, U., Weisbeek, P. and Smeekens, S. (1994) Plant Mol. Biol. 26, 873-886.
40. Vorst, O., Kock, P., Lever, A., Weterings, B., Weisbeek, P. and Smeekens, S. (1993) Plant J. 4, 933-945.
41. Vorst, O., Oosterhoff-Teertstra, R., Van Kan, P., Smeekens, S. and Weisbeek, P. (1988) Gene 65, 59-69.
42. Altschul, S.F., Gish, W., Miller, W., Myers, W.E. and Lipman, P.J. (1990) J. Mol. Biol. 215, 403-410.
43. Izaurralde, E., Mirkovitch, J. and Laemmli, U.K. (1988) J. Mol. Biol. 200, 111-125.
44. Ludérus, M.E.E., Degraaf, A., Mattia, E., Den Blaauwen, J.L., Grande, M.A., De Jong, L. and Van Driel, R. (1992) Cell 70, 949-959.
45. Mirkovitch, J., Mirault, M.-E. and Laemmli, U.K. (1984) Cell 39, 223-232.
46. Leutwiler, L.S., Hough-Evans, B.R. and Meyerowitz, E.M. (1984) Mol. Gen. Genet. 194, 15-23.
47. Pruitt, R.E. and Meyerowitz, E.M. (1986) J. Mol. Biol. 187, 169-183.
48. Carbone, M.L., Solinas, M., Sora, S. and Panzeri, L. (1991) Curr. Genet. 19, 1-8.
49. Wilson, R., Ainscough, R., Anderson, K., Baynes, C., Berks, M., Bonfield, J., Burton, J., Connell, M., Copsey, T., Cooper, J., et al. (1994) Nature (London) 168, 32-38.
50. Kolodrubetz, D. and Burgum, A. (1990) J. Biol. Chem. 265, 3234-3239.
51. Kun, J.F. and Anders, R.F. (1995) Mol. Biochem. Parasitol. 71, 249-253.
52. Dalrymple, B.P. and Peters, J.M. (1992) Biochem. Biophys. Res. Commun. 184, 31-35.
53. Paull, T.T. and Johnson, R.C. (1995) J. Biol. Chem. 270, 8744-8754.
54. Hardwick, K.G. and Pelham, H.R. (1994) Yeast 10, 265-269.
55. Jones, S.W. and Luk, C.K. (1988) J. Biol. Chem. 263, 9607-9611.
56. Tonissen, K.F. and Wells, J.R. (1991) Gene 102, 221-218.
57. Wollman, E.E., D'Auriol, L., Rimsky, L., Shaw, A., Jacquot, J.-P., Wingfield, P., Graber, P., Dessarps, F., Robin, P., Galibert, F., et al. (1988) J. Biol. Chem. 263, 15506-15512.
58. Holmgren, A. (1989) J. Biol. Chem. 264, 13963-13966.
59. Boulikas, T. (1995) In Berezney, R. and Jeon, K.W. (eds), Structural and Functional Organization of the Nuclear Matrix. Academic Press Inc, San Diego. Vol. 162A, pp. 279-388.
60. Bode, J., Kohwi, Y., Dickinson, L., Joh, T., Klehr, D., Mielke, C. and Kohwi-Shigematsu, T. (1992) Science 255, 195-197.
61. Glazkov, M.V. (1995) Mol. Biol. 29, 561-571.
62. Hall, G., Allen, G.C., Loer, D.S., Thompson, W.F. and Spiker, S. (1991) Proc. Natl. Acad. Sci. USA 88, 9320-9324.
63. Roberge, M. and Gasser, S.M. (1992) Mol. Microbiol. 6, 419-423.
64. Quaedvlieg, N., Dockx, J., Rook, F., Weisbeek, P. and Smeekens, S. (1995) Plant Cell 7, 117-129.
65. Mirkovitch, J., Spierer, P. and Laemmli, U.K. (1986) J. Mol. Biol. 190, 255-258.
66. Surdej, P., Brandli, D. and Miassod, R. (1991) Biol. Cell. 73, 111-120.
67. Nakagomi, K., Kohwi, Y., Dickinson, L.A. and Kohwi-Shigematsu, T. (1994) Mol. Cell. Biol. 14, 1852-1860.
68. Cunningham, J.M., Purucker, M.E., Jane, S.M., Safer, B., Vanin, E.F., Ney, P.A., Lowrey, C.H. and Nienhuis, A.W. (1994) Blood 84, 1298-1308.
69. Herrscher, R.F., Kaplan, M.H., Lelsz, D.L., Das, C., Scheuermann, R. and Tucker, P.W. (1995) Genes Dev. 9, 3067-3082.
70. Fackelmayer, F.O., Dahm, K., Renz, A., Ramsperger, U. and Richter, A. (1994) Eur. J. Biochem. 221, 749-757.