Confirmation of the presence of Mycobacterium tuberculosis and other mycobacteria in mycobacterial growth indicator tubes (MGIT) by multiplex strand displacement amplification

Journal of Clinical Microbiology

Volumn 35, Issue 5, 1997, Pages 1239-1243

  Badak, F Zuhre ^a,d   Kiska, Deanna L ^a,e   O'Connell, Michael ^b   Nycz, Colleen M ^b   Hartley, Cami ^a   Setterquist, Sharon ^a   Hopfer, Roy L ^a,c  

^a UNIVERSITY OF NORTH CAROLINA HOSPITALS   (United States)

^b BD Technologies   (United States)

^c UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^d EGE UNIVERSITY   (Turkey)

^e SUNY UPSTATE MEDICAL UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

ARTICLE; BACTERIAL GROWTH; BACTERIUM CULTURE; BACTERIUM DETECTION; CULTURE MEDIUM; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PRIORITY JOURNAL;

BACILLI; BACTERIA (MICROORGANISMS); CORYNEBACTERINEAE; MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS;

EID: 0030962047     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.35.5.1239-1243.1997     Document Type: Article

References (27)

1. Abe, C., K. Hirano, M. Wada, Y. Kazumi, M. Takahashi, Y. Fukasawa, T. Yoshimura, C. Miyagi, and S. Goto. 1993. Detection of Mycobacterium tuberculosis in clinical specimens by polymerase chain reaction and Gen-Probe Amplified Mycobacterium tuberculosis Direct Test. J. Clin. Microbiol. 31:3270-3274.
2. An, Q., D. Buxton, A. Hendricks, L. Robinson, J. Shah, L. Lu, M. Vera-Garcia, W. King, and D. M. Olive. 1995. Comparison of amplified Qβ replicase and PCR assays for detection of Mycobacterium tuberculosis. J. Clin. Microbiol. 33:860-867.
3. Bennedsen, J., V. O. Thomsen, G. E. Pfyffer, G. Funke, K. Feldmann, A. Beneke, P. A. Jenkins, M. Hegginbothom, A. Fahr, M. Hengstler, G. Cleator, P. Klapper, and E. G. L. Wilkins. 1996. Utility of PCR in diagnosing pulmonary tuberculosis. J. Clin. Microbiol. 34:1407-1411.
4. Bowles, E. J., T. R. Wisniewski, J. M. Makowski, K. K. Frantz, and J. A. Kiehlbauch. 1995. A clinical comparison of the BBL MGIT mycobacteria growth indicator tube with Bactec, Septicheck, and conventional media, abstr. U-142, p. 142. In Abstracts of the 95th General Meeting of the American Society for Microbiology 1995. American Society for Microbiology, Washington, D.C.
5. Clarridge, J. E., III, R. M. Shawar, T. M. Shinnick, and B. B. Plikaytis. 1993. Large-scale use of polymerase chain reaction for detection of Mycobacterium tuberculosis in a routine mycobacteriology laboratory. J. Clin. Microbiol. 31:2049-2056.
6. Down, J. A., M. A. O'Connell, M. S. Dey, A. H. Walters, D. R. Howard, M. C. Little, W. E. Keating, P. Zwadyk, Jr., P. D. Haaland, D. A. McLaurin III, and G. Cole. 1996. Detection of Mycobacterium tuberculosis in respiratory specimens by strand displacement amplification of DNA. J. Clin. Microbiol. 34:860-865.
7. Eisenach, K. D., M. D. Sifford, M. D. Cave, J. H. Bates, and J. T. Crawford. 1991. Detection of Mycobacterium tuberculosis in sputum samples using a polymerase chain reaction. Am. Rev. Respir. Dis. 144:1160-1163.
8. Forbes, B. A., and K. E. Hicks. 1993. Direct detection of Mycobacterium tuberculosis in respiratory specimens in a clinical laboratory by polymerase chair reaction. J. Clin. Microhiol. 31:1688-1694.
9. Forbes, B. A., and K. E. Hicks. 1994. Ability of PCR assay to identify Mycobacterium tuberculosis in BACTEC 12B vials. J. Clin. Microbiol. 32:1725-1728.
10. Hance, A. J., B. Grandchamp, V. Lévy-Frébault, D. Lecossier, J. Rauzier, D. Bocart, and B. Gicquel. 1989. Detection and identification of mycobacteria by amplification of mycobacterial DNA. Mol. Microbiol. 3:843-849.
11. Hanley, J. A. 1989. Receiver operator characteristic (ROC) methodology: the state of the art. Crit. Rev. Diagn. Imaging 29:307-335.
12. Hopfer, R. L., F. Badak, D. Kiska, C. Hartley, S. Setterquist, C. Nycz, and M. O'Connell. Use of strand displacement amplification (SDA) for confirmation of mycobacterium and Mycobacterium tuberculosis in clinical specimens cultured in mycobacterial growth indicator tubes (MGIT), abstr. C-21, p. 4. In Abstracts of the 96th General Meeting of the American Society for Microbiology 1996. American Society for Microbiology, Washington, D.C.
13. Kirschner, P., J. Rosenau, B. Springer, K. Teschner, K. Feldmann, and E. C. Böttger. 1996. Diagnosis of mycobacterial infections by nucleic acid amplification: 18-month prospective study. J. Clin. Microbiol. 34:304-312.
14. Moore, D. F., and J. I. Curry. 1995. Detection and identification of Mycobacterium tuberculosis directly from sputum sediments by Amplicor PCR. J. Clin. Microbiol. 33:2686-2691.
15. Neumann, M. A., J. Rogers, R. Williams, and S. Maxwell. 1995. Comparison of the new mycobacterial growth indicator tube (MGIT) with the BACTEC 460 TB system for the rapid detection of mycobacteria from clinical specimen, abstr. C-138, p. 24. In Abstracts of the 95th General Meeting of the American Society for Microbiology 1995. American Society for Microbiology, Washington, D.C.
16. Nolte, F. S., and B. Metchock. 1995. Mycobacterium, p. 400-437. In P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.), Manual of clinical microbiology. American Society for Microbiology, Washington, D.C.
17. O'Connell, M., B. Belanger, and P. Haaland. 1993. Calibration and assay development using the four-parameter logistic model. Chem. Intell. Lab. Syst. 20:97-114.
18. Pao, C. C., T. S. Benedict Yen, J.-B. You, J.-S. Maa, E. H. Fiss, and C.-H. Chang. 1990. Detection and identification of Mycobacterium tuberculosis by DNA amplification. J. Clin. Microbiol. 28:1877-1880.
19. Pfyffer, G. E., P. Kissling, E. M. I. Jahn, H.-M. Welscher, M. Salfinger, and R. Weber. 1996. Diagnostic performance of Amplified Mycobacterium tuberculosis Direct Test with cerebrospinal fluid, other nonrespiratory, and respiratory specimens. J. Clin. Microbiol. 34:834-841.
20. Spargo, C. A., P. D. Haaland, S. R. Jurgensen, D. D. Shank, and G. T. Walker. 1993. Chemiluminescent detection of strand displacement amplified DNA from species comprising the Mycobacterium tuberculosis complex. Mol. Cell. Probes 7:395-404.
21. Thierry, D., M. D. Cave, K. D. Eisenach, J. T. Crawford, J. H. Bates, B. Gicquel, and J. L. Guesdon. 1990. IS6110, an IS-like element of Mycobacterium tuberculosis complex. Nucleic Acids Res. 18:188.
22. Vuorinen, P., A. Miettinen, R. Vuento, and O. Hällström. 1995. Direct detection of Mycobacterium tuberculosis complex in respiratory specimens by Gen-Probe Amplified Mycobacterium tuberculosis Direct Test and Roche Amplicor Mycobacterium tuberculosis Test. J. Clin. Microbiol. 33:1856-1859.
23. Walker, G. T., M. S. Fraiser, J. L. Schram, M. C. Litle, J. G. Nadeau, and D. P. Malinowski. 1992. Strand displacement amplification - an isothermal in vitro DNA amplification technique. Nucleic Acids Res. 20:1691-3696.
24. Walker, G. T., M. C. Little, J. G. Nadeau, and D. D. Shank. 1992. Isothermal, in vitro amplification of DNA by a novel restriction enzyme/DNA polymerase system. Proc. Natl. Acad. Sci. USA 89:392-396.
25. Walker, G. T., J. G. Nadeau, P. A. Spears, J. L. Schram, C. M. Nycz, and D. D. Shank. 1994. Multiplex strand displacement amplification (SDA) and detection of DNA sequences from Mycobacterium tuberculosis and other mycobacteria. Nucleic Acids Res. 22:2670-2677.
26. Whittier, S., R. Hopfer, M. Knowles, and P. Gilligan. 1993. Improved recovery of mycobacteria from respiratory secretions of patients with cystic fibrosis. J. Clin. Microbiol. 31:861-864.
27. Zwadyk, P., Jr., J. A. Down, N. Myers, and M. S. Dey. 1994. Rendering of mycobacteria safe for molecular diagnostic studies and development of a lysis method for strand displacement amplification and PCR. J. Clin. Microbiol. 32:2140-2146.