Genome organization and transcription strategy in the complex G(NS)-L intergenic region of bovine ephemeral fever rhabdovirus

Journal of General Virology

Volumn 78, Issue 6, 1997, Pages 1309-1317

  McWilliam, Sean M ^a   Kongsuwan, Kritaya ^a   Cowley, Jeff A ^a   Byrne, Keren A ^a   Walker, Peter J ^a  

^a CSIRO   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENE SEQUENCE; MOLECULAR CLONING; OPEN READING FRAME; PRIORITY JOURNAL; RHABDOVIRUS; TRANSCRIPTION INITIATION; TRANSCRIPTION TERMINATION; VIRUS GENE; VIRUS GENOME; VIRUS TRANSCRIPTION;

EID: 0030960268     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-78-6-1309     Document Type: Article

References (40)

1. Bai, W., Tian, F., Wang, C., Jiang, C. & Zhang, Z. (1987). Preliminary studies of the complement fixation test to confirm the diagnosis of bovine ephemeral fever. Australian Journal of Biological Sciences 40, 137-141.
2. Bilsel, P. A. & Nichol, S. T. (1990). Polymerase errors accumulating during natural evolution of the glycoprotein gene of vesicular stomatitis virus Indiana serotype isolates. Journal of Virology 64, 4873-4883.
3. Brown, T. A. (1991). Hybridization analysis. In Molecular Biology Labfax, pp. 281-294. Edited by T. A. Brown. Oxford: BIOS Scientific Publications.
4. Calisher, C. H., Karabatsos, N., Zeller, H., Digoutte, J.-P., Tesh, R. B., Shope, R. E., Travassos da Rosa, A. P. A. & St George, T. D. (1989). Antigenic relationships among rhabdoviruses from vertebrates and haematophagous arthropods. Intervirology 49, 241-257.
5. Carrasco, L. (1995). Modification of membrane permeability by animal viruses. In Advances in Virus Research, vol. 45, pp. 95-112. Edited by K. Maramorosch, A. J. Shatkin & F. Murphy. San Diego: Academic Press.
6. Collins, P. L. & Wertz, G. W. (1985). The 1A protein gene of human respiratory syncytial virus: nucleotide sequence of the mRNA and a related polytranscript. Virology 141, 283-291.
7. Collins, P. L., Olmsted, R. A., Spriggs, M. K., Johnson, P. R. & Buckler-White, A. J. (1987). Gene overlap and site-specific attenuation of transcription of the viral polymerase L gene of human respiratory syncytial virus. Proceedings of the National Academy of Sciences, USA 84, 5134-5138.
8. Cybinski, D. H., Walker, P. J., Byrne, K. A. & Zakrzewski, H. (1990). Mapping of antigenic sites on the bovine ephemeral fever virus glycoprotein using monoclonal antibodies. Journal of General Virology 71, 2065-2072.
9. Della-Porta, A. J. & Brown, F. (1979). The physico-chemical characterization of bovine ephemeral fever virus as a member of the family Rhabdoviridae. Journal of General Virology 44, 99-112.
10. Dhillon, J. (1996). Molecular study of bovine ephemeral fever virus proteins. PhD thesis. University of Queensland, Queensland, Australia.
11. Doherty R. L., Standfast, H. A. & Clark, I. A. (1969). Adaptation to mice of the causative virus of ephemeral fever of cattle from an epizootic in Queensland, 1968. Australian Journal of Science 31, 365-366.
12. Domingo, E. & Holland, J. J. (1988). High error rates, population equilibrium and evolution of RNA replication systems. In RNA Genetics, vol. III, pp. 3-36. Edited by E. Domingo, J. J. Holland & P. Ahlquist. Boca Raton, Fla.: CRC Press.
13. bm6. Proceedings of the National Academy of Sciences, USA 83, 3371-3375.
14. Grassé, P.-P. (1977). Evolution of Living Organisms, p. 297. New York: Academic Press.
15. Gubler, U. & Hoffman, B. J. (1983). A simple and very efficient method for generating cDNA libraries. Gene 25, 263-269.
16. NS glycoprotein induces neutralizing antibodies and protects against experimental infection. Journal of General Virology 77, 631-640.
17. Hiebert, S. W., Richardson, C. D. & Lamb, R. A. (1988). Cell surface expression and orientation in membranes of the 44 amino acid SH protein of simian virus 5. Journal of Virology 62, 2347-2357.
18. Jackson, R. J., Howell, M. T. & Kaminski, A. (1990). The novel mechanism of initiation of picornavirus RNA translation. Trends in Biochemical Sciences 15, 477-483.
19. Kaminski, A., Belsham, G. J. & Jackson, R. J. (1994). Translation of encephalomyocarditis virus RNA: parameters influencing the selection of the internal initiation site. EMBO Journal 13, 1673-1681.
20. Keese, P. K. & Gibbs, A. (1992). Origins of genes: 'Big bang' or continuous creation? Proceedings of the National Academy of Sciences, USA 89, 9489-9493.
21. Kozak, M. (1986a). Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44, 283-292.
22. Kozak, M. (1986b). Bifunctional messenger RNAs in eukaryotes. Cell 47, 481-483.
23. Murphy, F. A., Taylor, W. P., Mims, C. A. & Whitfield, S. G. (1972). Bovine ephemeral fever in cell culture and mice. Archiv fuer die Gesamte Virusforschung 38, 234-249.
24. Ohno, S. (1984). Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence. Proceedings of the National Academy of Sciences, USA 81, 2421-2425.
25. Pearson, W. R. & Lipman, D. J. (1988). Improved tools for biological sequence comparisons. Proceedings of the National Academy of Sciences, USA 85, 2444-2448.
26. Peluso, R. W., Richardson, J. C., Talon, J. & Lock, M. (1996). Identification of a set of proteins (C′ and C) encoded by the bicistronic P gene of the Indiana serotype of vesicular stomatitis virus and analysis of their effect on transcription by the viral RNA polymerase. Virology 218, 335-342.
27. Poch, O., Blumberg, B. M., Bougueleret, L. & Tordo, N. (1990). Sequence comparisons of five polymerases (L proteins) of unsegmented negative-strand RNA viruses: theoretical assignment of functional domains. Journal of General Virology 71, 1153-1162.
28. St George, T. D. (1990). Bovine ephemeral fever virus. In Virus Infections of Vertebrates, vol. 3, pp. 404-415. Edited by Z. Dinner & B. Morein. Amsterdam: Elsevier.
29. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
30. Takeuchi, K., Tanabayashi, K., Hishiyama, M., Yamada, A. & Siguira A. (1991). Variations of nucleotide sequences and transcription of the SH gene among mumps virus strains. Virology 181, 364-366.
31. Uren, M. F., Walker, P. J., Zakrzewski, H., St George, T. D. & Byrne, K. A. (1994). Effective vaccination of cattle using the vinon G protein of bovine ephemeral fever rhabdovirus. Vaccine 12, 845-850.
32. Walker, P. J., Byrne, K. A., Cybinski, D. H., Doolan, D. L. & Wang, Y. (1991). Proteins of bovine ephemeral fever virus. Journal of General Virology 72, 67-74.
33. Walker, P. J., Byrne, K. A., Riding, G. A., Cowley, J. A., Wang, Y. & McWilliam, S. (1992). The genome of bovine ephemeral fever rhabdovirus contains two related glycoprotein genes. Virology 191, 49-61.
34. Walker, P. J., Wang, Y., Cowley, J. A., McWilliam, S. M. & Prehaud, C. J. N. (1994). Structural and antigenic analysis of the nucleoprotein of bovine ephemeral fever rhabdovirus. Journal of General Virology 75, 1889-1899.
35. Wang, Y. & Walker, P. J. (1993). Adelaide River rhabdovirus expresses consecutive glycoprotein genes as polycistronic mRNA: new evidence of gene duplication as an evolutionary process. Virology 195, 719-731.
36. Wang, Y., Cowley, J. A. & Walker, P. J. (1995). Adelaide River virus nucleoprotein gene: analysis of phylogenetic relationships of ephemeroviruses and other rhabdoviruses. Journal of General Virology 76, 995-999.
37. NS-L intergenic region of Adelaide River rhabdovirus. Virology 203, 63-72.
38. Williams, M. A. & Lamb, R. A. (1988). Polylactosaminoglycan modification of a small integral membrane glycoprotein, influenza virus NB. Molecular and Cellular Biology 8, 1186-1196.
39. Wunner, W. H., Calisher, C. H., Dietzgen, R. G., Jackson, A. O., Kitajima, E. W., Lafon, M. F., Leong, J. C., Nichol S. T., Peters, D., Smith, J. S. & Walker, P. J. (1995). The Rhabdovindae. In Virus Taxonomy. Sixth Report of the International Committee on Taxonomy of Viruses, pp. 288-293. Edited by F. A. Murphy, C. M. Fauquet, D. H. L. Bishop, S. A. Ghabrial, A. W. Jarvis, G. P. Martelli, M. A. Mayo & M. D. Summers. Vienna & New York: Springer-Verlag.
40. 2 in virions. Journal of Virology 62, 2762-2772.