Analysis of primer-derived, nonspecific amplification products in RAPD- PCR

BioTechniques

Volumn 22, Issue 6, 1997, Pages 1071-1077

  Pan, Y B ^a   Burner, D M ^a   Ehrlich, K C ^b   Grisham, M P ^a   Wei, Q ^a  

^a SOUTHERN REGIONAL RESEARCH CENTER   (United States)

^b FFS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; ARTIFACT; DNA TEMPLATE; GENOME; HETEROZYGOTE; HUMAN IMMUNODEFICIENCY VIRUS; POLYMERASE CHAIN REACTION; RANDOM AMPLIFIED POLYMORPHIC DNA; REPRODUCIBILITY; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

HUMAN IMMUNODEFICIENCY VIRUS;

EID: 0030955936     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: 10.2144/97226bm13     Document Type: Article

References (17)

1. Annamalai, P., H. Ishii, D. Lalithakumari and R. Revathi. 1995. Polymerase chain reaction and its applications in fungal disease diagnosis. J. Plant Dis. Protect. 102:91-104.
2. Botstein, D., R.L. White, M. Skolnick and R.W. Davis. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32:314-331.
3. Böttger, E.C. 1990. Frequent contamination of Taq polymerase with DNA. Clin. Chem. 36:1258-1259.
4. Burner, D.M., Y.-B. Pan and R.D. Webster. Genetic diversity of North American and Old World Saccharum assessed by RAPD analysis. Genet. Res. Crop Evol. Vol. 44 (In press).
5. Fritsch, P., M.A. Hanson, C.D. Spore, P.E. Pack and L.H. Rieseberg. 1993. Constancy of RAPD primer amplification strength among distantly related taxa of flowering plants. Plant Mol. Biol. Rep. 11:10-20.
6. Hadidi, A., L. Levy and E.V. Podleckis. 1995. Polymerase chain reaction technology in plant pathology, p. 167-187. In R.P. Singh and U.S. Singh (Eds.), Molecular Methods in Plant Pathology. CRC/Lewis Publishers, Boca Raton.
7. Higuchi, R., C. Fockler, G. Dollinger and R. Watson. 1993. Kinetic PCR analysis: real-time monitoring of DNA amplification reactions. Bio/Technology 11:1026-1030.
8. Joshi, C.P. and H.T. Nguyen. 1993. Application of the random amplified polymorphic DNA technique for the detection of polymorphism among wild and cultivated tetraploid wheat. Genome 36:602-609.
9. Lanham, P.G., S. Fennell, J.P. Moss and W. Powell. 1992. Detection of polymorphic loci in Arachis germplasm using random amplified polymorphic DNAs. Genome 35:885-889.
10. Li, W.L. 1994. Standardization of RAPD (random amplified polymorphic DNA) using Opti-Taq™ system. bioSOLUTIONS Newsl. 1:1-3.
11. Operon Technologies. 10-mer Kits Product Information. Alameda, CA.
12. Pan, Y.-B., M.P. Grisham and D.M. Burner. 1996. A PCR protocol for the detection of Xanthomonas albilineans, the causal agent of sugarcane leaf scald disease. Plant Dis. 81:189-194.
13. Tingey, S.V. and J.P. del Tufo. 1993. Genetic analysis with random amplified polymorphic DNA markers. Plant Physiol. 101:349-352.
14. Tingey, S.V., J.A. Rafalski and J.G.K. Williams. Genetic analysis with RAPD markers, p. 3-8. Proceedings of the Symposium: Applications of RAPD Technology to Plant Breeding, 1992 November 1; Minneapolis, MN.
15. Weeden, N.F., G.M. Timmerman, M. Hemmat, B.E. Kneen and M.A. Lodhi. Inheritance and reliability of RAPD markers, p. 12-17. Proceedings of the Symposium: Applications of RAPD Technology to Plant Breeding, 1992 November 1; Minneapolis, MN.
16. Welsh, J. and M. McClelland. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18:7213-7218.
17. Williams, J.G.K., A.R. Kubelik, K.J. Livak, J.A. Rafalski and S.V. Tingey. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acid Res. 18:6531-6535.