Structural and kinetic investigations on the 15-21 and 42-45 loops of muscle acylphosphatase: Evidence for their involvement in enzyme catalysis and conformational stabilization

Biochemistry

Volumn 36, Issue 23, 1997, Pages 7217-7224

  Taddei, Niccolò ^b   Chiti, Fabrizio ^b   Magherini, Francesca ^b   Stefani, Massimo ^a,b   Thunnissen, Marjolein M G M ^c   Nordlund, Pär ^c   Ramponi, Giampietro ^b  

^a Department of Biochemical Sciences ^*  (Italy)

^b UNIVERSITY OF FLORENCE   (Italy)

^c STOCKHOLM UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

ACYLPHOSPHATASE; ISOENZYME; MUSCLE ENZYME;

ARTICLE; CATALYSIS; CIRCULAR DICHROISM; CONTROLLED STUDY; CRYSTAL STRUCTURE; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME CONFORMATION; ENZYME KINETICS; ENZYME STABILITY; ENZYME STRUCTURE; ENZYME SUBSTRATE COMPLEX; HUMAN; NONHUMAN; PRIORITY JOURNAL; PROTEIN FOLDING; PROTON NUCLEAR MAGNETIC RESONANCE; SITE DIRECTED MUTAGENESIS;

ACID ANHYDRIDE HYDROLASES; ANIMALS; BINDING SITES; CATALYSIS; CIRCULAR DICHROISM; CRYSTALLOGRAPHY, X-RAY; DROSOPHILA; ENZYME STABILITY; ESCHERICHIA COLI; HYDROGEN BONDING; KINETICS; MODELS, MOLECULAR; MUSCLES; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION;

EID: 0030953645     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi970173+     Document Type: Article

References (52)

1. Adman, F. T., Sicker, L. C., & Jensen, L. H. (1972) J. Biol. Chem. 248, 3987-3996.
2. Becktel, W. J., & Schellman, J. A. (1987) Biopolymers 26, 1859-1877.
3. Berti, A., Liguri, G., Stefani, M., Nassi, P., & Ramponi, G. (1982) Physiol. Chem. Phys. 14, 307-311.
4. Berti, A., Stefani, M., Degl'Innocenti, D., Ruggiero, M., Chiarugi, V., & Ramponi, G. (1988) FEBS Lett. 235, 229-232.
5. Berti, A., Degl'Innocenti, D., Stefani, M., & Ramponi, G. (1992) Arch. Biochem. Biophys. 294, 261-264.
6. Camici, G., Manao, G., Cappugi, G., & Ramponi, G. (1976) Experientia 22, 705.
7. Cappugi, G., Manao, G., Camici, G., & Ramponi, G. (1980) J. Biol. Chem. 255, 6868-6874.
8. Coll, M., Guasch, A., Aviles, F. X., & Huber, R. (1991) EMBO J. 10, 1-9.
9. Curtis Johnson, W., Jr. (1988) Annu. Rev. Biophys. Biophys. Chem. 17, 145-166.
10. De Filippis, V., Vindigni, A., Altichieri, A., & Fontana, A. (1995) Biochemistry 34, 9552-9564.
11. Deng, W. P., & Nickoloff, J. A. (1992) Anal. Biochem. 200, 81.
12. Dolfi, F., Carnero, A., Ramponi, G., & Lacal, J. C. (1993) FEBS Lett. 326, 167-170.
13. Dolfi, F., Carnero, A., Cuadrado, A., Ramponi, G., & Lacal, J. C. (1993) FEBS Lett. 327, 265-270.
14. Eriksson, P. O., & Salman, L. (1993) J. Biomol. NMR 3, 613-626.
15. Fujita, H., Mizuno, Y., & Shiokawa, H. (1987) J. Biochem. (Tokyo) 102, 1405-1414.
16. Hokin, I. E., Sastry, P. S., Galsworthy, P. R., & Yoda, A. (1965) Proc. Natl. Acad. Sci. U.S.A. 54, 177-184.
17. Kraulis, P. (1991) J. Appl. Crystallogr. 24, 946-950.
18. Laemmli, U. K. (1970) Nature 227, 680-685.
19. Leijonmark, M., & Liljas, A. (1987) J. Mol. Biol. 195, 555-580.
20. Liguri, G., Camici, G., Manao, G., Cappugi, G., Nassi, P., Modesti, A., & Ramponi, G. (1986) Biochemistry 25, 8089-8094.
21. Manao, G., Camici, G., Stefani, M., Berti, A., Cappugi, G., Liguri, G., Nassi, P., & Ramponi, G. (1983) Arch. Biochem. Biophys. 226, 414-424.
22. Matouschek, A., Serrano, L., & Fersht, A. R. (1994) Analysis of protein folding by protein engineering in Mechanism of protein folding (Pain, R. H., Ed.) pp 137-159, IRL press at Oxford University Press, Oxford, U.K.
23. Mizuno, Y., Ohba, Y., Fujita, H., Kanesaka, Y., Tamura, T., & Shiokawa, H. (1990) Arch. Biochem. Biophys. 278, 437-443.
24. Modesti, A., Raugei, G., Taddei, N., Marzocchini, R., Vecchi, M., Camici, G., Manao, G., & Ramponi, G. (1993) Biochim. Biophys. Acta 1216, 369-374.
25. Modesti, A., Taddei, N., Bucciantini, M., Stefani, M., Colombini, B., Raugei, G., & Ramponi, G. (1995) Protein Expression Purif. 6, 799-805.
26. Nagai, K., Oubridge, C., Jessen, T. H., & Evans, P. R. (1990) Nature 348, 515-520.
27. Nassi, P., Nediani, C., Liguri, G., Taddei, N., & Ramponi, G. (1991) J. Biol. Chem. 266, 10867-10871.
28. Nassi, P., Marchetti, E., Nediani, C., Liguri, G., & Ramponi, G. (1993) Biochim. Biophys. Ada 1147, 19-26.
29. Nassi, P., Nediani, C., Fiorillo, C., Marchetti. E., Liguri, G., & Ramponi, G. (1994) FEBS Lett. 337, 109-113.
30. Nediani, C., Fiorillo, C., Marchetti, E., Pacini, A., Liguri, G., & Nassi, P. (1996) J. Biol. Chem. 271, 19066-19073.
31. Ohba, Y., Mizuno, Y., & Shiokawa, H. (1989) J. Biochem. (Tokyo) 105, 173-177.
32. Pastore, A., Saudek, V., Ramponi, G., & Williams, R. J. P. (1992) J. Mol. Biol. 224, 427-440.
33. Pazzagli, L., Cappugi, G., Camici, G., Manao, G., & Ramponi, G. (1993) J. Protein Chem. 12, 593-601.
34. Privalov, P. L. (1979) Adv. Protein Chem. 33, 167-241.
35. Ramponi, G. (1975) Adv. Enzymol. 42, 409-426.
36. Ramponi, G., Treves, C., & Guerritore, A. (1966) Experientia 22, 1019-1023.
37. Ramponi, G., Nassi, P., & Treves, C. (1968) Life Sci. 7, 443-448.
38. Raugei, G., Modesti, A., Magherini, F., Marzocchini, R., Vecchi, M., & Ramponi, G. (1996) Biotechnol. Appl. Biochem. 23, 273-278.
39. Reinard, T., & Jacobsen, H. J. (1989) Anal. Biochem. 176, 157-160.
40. Sanger, F., Nicklen, S., & Coulson, A. R. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 5436.
41. Satchell, D. P. N., Spencer, N., & White, G. F. (1972) Biochim. Biophys. Acta 268, 233-248.
42. Saudek, V., Williams, R. J. P., Stefani, M., & Ramponi, G. (1989) Eur. J. Biochem. 185, 99-103.
43. Stefani, M., & Ramponi, G. (1995) Life Chem. Rep. 12, 271-301.
44. Stefani, M., Liguri, G., Berti, A., Nassi, P., & Ramponi, G. (1981) Arch. Biochem. Biophys. 208, 37-41.
45. Stites, W. E., Meeker, A. K., & Shortle, D. (1994) J. Mol. Biol. 235, 27-32.
46. Taddei, N., Stefani, M., Vecchi, M., Modesti, A., Raugei, G., Bucciantini, M., Magherini, F., & Ramponi, G. (1994a) Biochim. Biophvs. Acta 1208, 75-80.
47. Taddei, N., Buck, M., Broadhurst, R. W., Stefani, M., Ramponi, G., & Dobson, C. M. (1994b) Eur. J. Biochem. 225, 811-817.
48. Taddei, N., Modesti, A., Bucciantini, M., Stefani, M., Magherini, F., Vecchi, M., Raugei, G., & Ramponi, G. (1995) FEBS Lett. 362, 175-179.
49. Taddei, N., Stefani, M., Magherini, F., Chiti, F., Modesti, A., Raugei, G., & Ramponi, G. (1996) Biochemistry 35, 7077-7083.
50. Thunnissen, M. M. G. M., Taddei, N., Liguri, G., Ramponi, G., & Nordlund, P. (1997) Structure 5, 69-79.
51. Toumadje, A., Alcorn, S. W., & Johnson, W. C. (1992) Anal. Biochem. 200, 321-331.
52. Wüthrich, K. (1986) in NMR of Proteins and Nucleic Acids, John Wiley & Sons, New York.