Characterisation of 3' end formation of the yeast HIS3 mRNA

Gene

Volumn 190, Issue 1, 1997, Pages 69-76

  Mahadevan, Subramony ^a   Raghunand, Tirumalai R ^a   Panicker, Sunanda ^a   Struhl, Kevin ^b  

^a INDIAN INSTITUTE OF SCIENCE   (India)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

3' processing; Polyadenylation; Saccharomyces; Transcription termination

Indexed keywords

MESSENGER RNA; PYRIMIDINE;

CONFERENCE PAPER; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYADENYLATION; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA ANALYSIS; RNA PROCESSING; RNA SEQUENCE; RNA TRANSCRIPTION; YEAST;

BASE SEQUENCE; DNA, COMPLEMENTARY; HYDRO-LYASES; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; OPEN READING FRAMES; RNA, MESSENGER; SACCHAROMYCES CEREVISIAE; SEQUENCE DELETION;

EID: 0030945728     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(96)00708-1     Document Type: Conference Paper

References (24)

1. Abe, A., Hiroka, Y. and Fukasawa, T. (1990) Signal sequences for generation of mRNA 3′ end in the Saccharomyces cerevisiae GAL7 gene. EMBO J. 9, 3691-3697.
2. Connelly S. and Manley, J.L. (1988) A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase II. Genes Dev. 2, 440-452.
3. Frohman, M.A. (1990) RACE: rapid amplification of cDNA ends. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. and White, T.J. (Eds.), PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA, pp. 28-38.
4. Heidmann, S., Obermaier, B., Vogel, K. and Domdey, H. (1992) Identification of pre-mRNA polyadenylation sites in Saccharomyces cerevisiae. Mol. Cell. Biol. 12, 4215-4229.
5. Heidmann, S., Schindewolf, C., Stumpf, G. and Domdey, H. (1994) Flexibility and interchangeability of polyadenylation signals in Saccharomyces cerevisiae. Mol. Cell. Biol. 14, 4633-4642.
6. Henikoff, S. and Cohen, E.H. (1984) Sequences responsible for transcription termination on a gene segment in Saccharomyces cerevisiae. Mol. Cell. Biol. 4, 1515-1520.
7. Humphrey, T., Sadhale, P., Platt, T. and Proudfoot, N. (1991) Homologous mRNA 3′ end formation in fission and budding yeast. EMBO J. 10, 3503-3511.
8. Hyman, L.E. and Moore, C.L. (1993) Termination and pausing of RNA polymerase II downstream of yeast polyadenylation sites. Mol. Cell. Biol. 13, 5159-5167.
9. Hyman, L.E., Seiler, S.H., Whoriskey, J. and Moore, C.L. (1991) Point mutations upstream of the yeast ADH2 poly(A) site significantly reduce the efficiency of 3′ end formation. Mol. Cell. Biol 11, 2004-2012.
10. Irniger S. and Braus, G.H. (1994) Saturation mutagenesis of a polyadenylation signal reveals a hexanucleotide element essential for mRNA 3′ end formation in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 91, 257-261.
11. Irniger, S., Egli, C.M. and Braus, G.H. (1991) Different classes of polyadenylation sites in the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 11, 3060-3069.
12. Logan, J., Falck-Pederson, J.E., Darnell, J. and Shenk, T. (1987) A poly(A) addition site and downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse β-globin gene. Proc. Natl. Acad. Sci. USA 84, 8306-8310.
13. Proudfoot, N.J. (1989) How RNA polymerase II terminates transcription in higher eukaryotes. Trends Biochem. Sci. 14, 105-110.
14. Russo, P. and Sherman, F. (1989) Transcription terminates near the poly(A) site in the CYC1 gene of the yeast Sacchyaromyces cerevisiae. Proc. Natl. Acad. Sci. USA 86, 8348-8352.
15. Russo, P., Li, W-Z., Quo, Z., Hampsey, D.M., Zaret, K.S. and Sherman, F. (1991) Distinct cis-acting signals enhance 3′ end formation of CYC1 mRNA in the yeast Saccharomyces cerevisiae. EMBO J. 10, 563-571.
16. Russo, P., Li, W.-Z., Guo, Z. and Sherman, F. (1993) Signals that produce 3′ termini in CYC1 mRNA of the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 13, 7836-7849.
17. Sadhale, P. and Platt, T. (1992) Unusual aspects of in vitro RNA processing in the 3′ regions of the GAL1, GAL7, and GAL10 genes in Saccharomyces cerevisiae. Mol. Cell. Biol. 12, 4262-4270.
18. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning. A Laboratory Manual, 2nd Ed. CSHLP, Cold Spring Harbor, NY.
19. Sato, K., Ho, R., Baek, K. and Agarwal, K. (1986) Specific DNA sequence controls termination of transcription in the gastrin gene. Mol. Cell. Biol. 6, 1032-1043.
20. Sikorski, R.S. and Hieter, P. (1989) A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
21. Struhl, K. (1984) Genetic properties and chromatin structure of a yeast GAL regulatory element: an enhancer-like sequence. Proc. Natl. Acad. Sci. USA 81, 7865-7869.
22. Struhl, K. (1985) Nucleotide sequence and transcriptional mapping of the yeast PET56-HIS3-DED1 gene region. Nucleic Acids Res. 13, 8587-8601.
23. Zaret, K.S. and Sherman, F. (1982) DNA sequence required for efficient transcription termination in yeast. Cell 28, 563-573.
24. Zuker, M. and Steigler, P. (1981) Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res. 9, 133-148.