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Volumn 13, Issue 2, 1997, Pages 131-136

Detection of significant patterns by compression algorithms: The case of approximate tandem repeats in dna sequences

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; CHROMOSOME; COMPRESSION; DNA SEQUENCE; PRIORITY JOURNAL; TANDEM REPEAT; YEAST;

EID: 0030935318     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/13.2.131     Document Type: Article
Times cited : (43)

References (18)
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    • (1994) Symposium on Multiple Alignment. USA
    • Benson, G.1    Waterman, M.S.2
  • 3
    • 0004070287 scopus 로고
    • Wiley Series in Telecommunications. A. Wiley-Interscience
    • Cover, TM. and ThomasJ.A. (1991) Information Theory. Wiley Series in Telecommunications. A. Wiley-Interscience.
    • (1991) Information Theory
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  • 7
    • 0000100455 scopus 로고
    • A new challenge for compression algorithms: Genetic sequences
    • Grumbach, S. and Tahi.F. (1994) A new challenge for compression algorithms: genetic sequences. J. Inf. Process. Manage., 30, 875—886.
    • (1994) J. Inf. Process. Manage. , vol.30 , pp. 875-886
    • Grumbach, S.1    Tahi, F.2
  • 8
    • 0028238894 scopus 로고
    • Over-representation of the disease associated (CAG) and (CGG) repeats in the human genome
    • Han, J., Hsu, C, Zhu, Z, Longshore, J.W. and Finley, W H. (1994) Over-representation of the disease associated (CAG) and (CGG) repeats in the human genome. Nucleic Acids Res., 22, 1735-1740.
    • (1994) Nucleic Acids Res , vol.22 , pp. 1735-1740
    • Han, J.1    Hsu, C.2    Zhu, Z.3    Longshore, J.W.4    Finley, W.H.5
  • 11
    • 0027194328 scopus 로고
    • Discovering simple DNA sequences by the algorithmic significance method
    • Milosavljevic, A. and Jurka.J. (1993a) Discovering simple DNA sequences by the algorithmic significance method. Comput. Applic. Biosci, 9, 407-411.
    • (1993) Comput. Applic. Biosci , vol.9 , pp. 407-411
    • Milosavljevic, A.1    Jurka, J.2
  • 12
    • 34250075896 scopus 로고
    • Discovery by minimal length encoding: A case study in molecular evolution
    • Milosavljevic, A. and Jurka, J. (1993b) Discovery by minimal length encoding: a case study in molecular evolution. Machine Learn., 12, 69-87.
    • (1993) Machine Learn , vol.12 , pp. 69-87
    • Milosavljevic, A.1    Jurka, J.2
  • 13
    • 0029059286 scopus 로고
    • DosDNA occurs along yeast chromosomes, regardless of functional significance of the sequence
    • Ollivier, E., Delorme, M.-0. and Henaut, A. (1995) DosDNA occurs along yeast chromosomes, regardless of functional significance of the sequence. C.R. Acad. Sci., 318, 599-608.
    • (1995) C.R. Acad. Sci. , vol.318 , pp. 599-608
    • Ollivier, E.1    Delorme, M.2    Henaut, A.3
  • 14
    • 0000399152 scopus 로고
    • Minimum description length principle
    • Kotz.S. and Johnson.N.L., Wiley, New York, pp
    • Rissanen, J. (1995) Minimum description length principle. In Kotz.S. and Johnson.N.L. (eds). Encyclopedia of Statistical Sciences, 5. Wiley, New York, pp. 523-527.
    • (1995) Encyclopedia of Statistical Sciences, 5 , pp. 523-527
    • Rissanen, J.1
  • 17
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    • Genome rearrangement and stability, chapter Defined ordered sequence DNA, DNA structure, and DNA-directed mutation
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    • Wells.R.D. and Sinden.R.R. (1993) Genome rearrangement and stability, chapter Defined ordered sequence DNA, DNA structure, and DNA-directed mutation. In Davies.K.E. and Warren, S.T. (eds), Genome Analysis, 7. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) Genome Analysis , vol.7
    • Wells, R.D.1    Sinden, R.R.2
  • 18
    • 0018019231 scopus 로고
    • Compression of individual sequence via variable length coding
    • Ziv.J. and Lempel.A. (1978) Compression of individual sequence via variable length coding. IEEE Trans. Inf. Theory, 24, 530-536.
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    • Ziv, J.1    Lempel, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.