Localization of the major ethidium bromide binding site on tRNA

Nucleic Acids Research

Volumn 25, Issue 19, 1997, Pages 3944-3949

  Chu, Wen Chy ^a   Liu, Jack C H ^a   Horowitz, Jack ^a  

^a IOWA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ETHIDIUM BROMIDE; FLUOROURACIL; VALINE TRANSFER RNA;

ARTICLE; BINDING SITE; ESCHERICHIA COLI; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEIC ACID BASE SUBSTITUTION; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; RNA BINDING; RNA STRUCTURE;

BASE SEQUENCE; BINDING SITES; ESCHERICHIA COLI; ETHIDIUM; FLUORINE; INTERCALATING AGENTS; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; RNA, BACTERIAL; RNA, TRANSFER, VAL;

ESCHERICHIA COLI;

EID: 0030930750     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.19.3944     Document Type: Article

References (39)

1. Waring, M.J. (1975) In Corcoran, J.W. and Hahn, F.E. (eds), Antibiotics III. Springer-Verlag, New York, pp. 141-165.
2. Dickenson, L., Chantrill, D.I., Inkley, G.W. and Thompson, M.J. (1953) Br. J. Pharmacol. 8, 139-142.
3. Eron, L.J. and McAuslan, B.R. (1966) Biochim. Biophys. Acta 114, 633-636.
4. Lurquin, P. and Buchet-Mahieu, J. (1971) FEBS Lett. 12, 244-248.
5. Kramer, F.R., Mills, D.R., Cole, P.E., Nishihara, T. and Spiegelman, S. (1974) J. Mol. Biol. 89, 719-736.
6. Loeb, L.A. (1974) In Boyer, P.D. (ed), Enzymes, 3rd edn. Academic Press, NY, Vol. 10, pp. 173-209.
7. Waring, M.J. (1964) Biochim. Biophys. Acta 87, 358-361.
8. Waring, M.J. (1965) J. Mol. Biol. 13, 269-282.
9. Bauer, W. and Vinograd, J. (1968) J. Mol. Biol. 33, 141-171.
10. Kreishman, G.P., Chan, S.I. and Bauer, W. (1971) J. Mol. Biol. 61, 45-58.
11. Neidle, S. and Abraham, Z. (1984) CRC Crit. Rev. Biochem. 17, 73-121.
12. Jones, C.R. and Kearns, D.R. (1975) Biochemistry 14, 2660-2665.
13. Jones, C.R., Bolton, P.H. and Kearns, D.R. (1978) Biochemistry 17, 601-607.
14. Bittman, R. (1969) J. Mol. Biol. 46, 251-268.
15. Tao, T., Nelson, J.H. and Cantor, C.R. (1970) Biochemistry 9, 3514-3524.
16. Wells, B.D. and Cantor, C.R. (1977) Nucleic Acids Res. 4, 1667-1680.
17. Liebman, M., Rubin, J. and Sundaralingam, M. (1977) Proc. Natl. Acad. Sci. USA 74, 4821-4825.
18. Goldfield, E.M., Luxon, B.A., Bowie, V. and Gorenstein, D.G. (1983) Biochemistry 22, 3336-3344.
19. Nielsen, P.E. (1981) Biochim. Biophys. Acta 655, 89-95.
20. Horowitz, J., Ofengand, J., Daniel, W.E. and Cohn, M. (1977) J. Biol. Chem. 252, 4418-4420.
21. Hardin, C.C., Gollnick, P., Kallenbach, N.R., Cohn, M. and Horowitz, J. (1986) Biochemistry 25, 5699-5709.
22. Hardin, C.C., Gollnick, P. and Horowitz, J. (1988) Biochemistry 27, 487-495.
23. Gollnick, P., Hardin. C.C. and Horowitz, J. (1986) Nucleic Acids Res. 14, 4659-4672.
24. Gollnick, P., Hardin, C.C. and Horowitz, J. (1987) J. Mol. Biol. 197, 571-589
25. Chu, W.-C. and Horowitz, J. (1989) Nucleic Acids Res. 17, 7241-7252.
26. Chu, W.-C. and Horowitz, J. (1991) Biochemistry 30, 1655-1663.
27. Chu, W.-C. and Horowitz, J. (1991) FEBS Lett. 295, 159-162.
28. Chu, W.-C., Feiz, V., Derrick, W.B. and Horowitz, J. (1992) J. Mol. Biol. 227, 1164-1172.
29. Chu, W.-C., Kintanar, A. and Horowitz, J. (1992) J. Mol. Biol. 227, 1173-1181.
30. Liu, M. and Horowitz, J (1993) BioTechnigues 15, 264-266.
31. Nakamaye, K.L. and Eckstein, F. (1986) Nucleic Acids Res. 14, 9679-9698.
32. Shaw, D. (1976) In Fourier Transform NMR Spectroscopy. Elsevier, New York, p 179.
33. Kintanar, A., Metzler, C.M., Metzler, D.E. and Scott, R.D. (1991) J. Biol. Chem. 266 17222-17229.
34. Sklenar, V. and Bax, A. (1987) J. Magn. Reson. 74, 469-479.
35. Plateau, P. and Guéron, M. (1982) J. Am. Chem. Soc. 104, 7310-7311.
36. Kintanar, A., Yue, D. and Horowitz, J. (1994) Biochimie 76, 1192-1204.
37. Sander, E.G. and Deyrup, C.L. (1972) Arch. Biochem. Biophys. 150, 600-605.
38. Holbrook, S.R., Sussman, J.L., Warant, R.W. and Kim, S.-H. (1978) J. Mol. Biol. 123, 631-660.
39. Aboul-ela, F., Nikonowicz, E.P. and Pardi, A. (1994) FEBS Lett. 347, 261-254.