Chemical modification and site-directed mutagenesis of the single cysteine in motif 3 of class II Escherichia coli prolyl-tRNA synthetase

Biochemistry

Volumn 36, Issue 10, 1997, Pages 2932-2938

  Stehlin, Catherine ^a   Heacock II, Donald H ^a,b   Liu, Hongjian ^a   Musier Forsyth, Karin ^a  

^a University of Minnesota   (United States)

^b UNIVERSITY OF NEVADA SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

5,5' DITHIOBIS(2 NITROBENZOIC ACID); ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; ALANINE; AMINO ACID TRANSFER RNA LIGASE; BACTERIAL ENZYME; CYSTEINE; GLYCINE; PROLINE; PROLINE TRANSFER RNA; SERINE;

AMINOACYLATION; ARTICLE; CHEMICAL MODIFICATION; CONTROLLED STUDY; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; SITE DIRECTED MUTAGENESIS;

AMINO ACID SEQUENCE; AMINO ACYL-TRNA SYNTHETASES; BINDING SITES; CATALYSIS; CYSTEINE; DITHIONITROBENZOIC ACID; ENZYME INHIBITORS; ESCHERICHIA COLI; IODOACETAMIDE; KINETICS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; NAPHTHALENESULFONATES; POINT MUTATION; RNA, TRANSFER, AMINO ACYL; SEQUENCE ALIGNMENT;

EID: 0030929830     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi962295s     Document Type: Article

References (47)

1. Arnez, J. G., Harris, D. C., Mitschler, A., Rees, B., Francklyn, C. S., & Moras, D. (1995) EMBO J. 14, 4143-4155.
2. Belrhali, H., Yaremchuk, A., Tukalo, M., Larsen, K., Berthet-Colominas, C., Leberman, R., Beijer, B., Sproat, B., Als-Nielsen, J., Grübel, G., Legrand, J.-F., Lehmann, M., & Cusack, S. (1994) Science 263, 1432-1436.
3. Bodwell, J. E., Holbrook, N. J., & Munck, A. (1984) Biochemistry 23, 1392-1398.
4. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254.
5. Brick, P., Bhat, T. N., & Blow, D. M. (1989) J. Mol. Biol. 208, 83-98.
6. Brunie, S., Zelwer, C., & Risler, J.-L. (1990) J. Mol. Biol. 216, 411-424.
7. Calendar, R., & Berg, P. (1966) Biochemistry 5, 1690-1695.
8. Cavarelli, J., Eriani, G., Rees, B., Ruff, M., Boeglin, M., Mitschler, A., Martin, F., Gangloff, J., Thierry, J.-C., & Moras, D. (1994) EMBO J. 13, 327-337.
9. Cerini, C., Kerjan, P., Astier, M., Gratecos, D., Mirande, M., & Semeriva, M. (1991) EMBO J. 10, 4267-4277.
10. Cusack, S. (1993) Biochimie 75, 1077-1081.
11. Cusack, S., Berthet-Colominas, C., Härtlein, M., Nassar, N., & Leberman, R. (1990) Nature 347, 249-265.
12. Cusack, S., Härtlein, M., & Leberman, R. (1991) Nucleic Acids Res. 19, 3489-3498.
13. Davis, M. W., Buechter, D. D., & Schimmel, P. (1994) Biochemistry 33, 9904-9911.
14. Eriani, G., Delarue, M., Poch, O., Gangloff, J., & Moras, D. (1990) Nature 347, 203-206.
15. Ferguson, B. Q., & Yang, D. C. H. (1986) Biochemistry 25, 2743-2748.
16. Fett, R., & Knippers, R. (1991) J. Biol. Chem. 226, 1448-1455.
17. First, E. A., Johnson, D. A., & Taylor, S. S. (1989) Biochemistry 28, 3606-3613.
18. Freist, W. (1989) Biochemistry 28, 6787-6795.
19. Heacock, D., Forsyth, C. J., Shiba, K., & Musier-Forsyth, K. (1996) Bioorg. Chem. 24, 273-289.
20. Hill, K., & Schimmel, P. (1989) Biochemistry 28, 2577-2586.
21. Ibba, M., Kast, P., & Henneke, H. (1994) Biochemistry 33, 7107-7112.
22. Ibba, M., Johnson, C. M., Hennecke, H., & Fersht, A. R. (1995) FEBS Lett. 358, 293-296.
23. Jasin, M., Regan, L., & Schimmel, P. (1985) J. Biol. Chem. 260, 2226-2230.
24. Kast, P., & Hennecke, H. (1991) J. Mol. Biol. 222, 99-124.
25. Kim, S. H., Suddath, F. L., Quigley, G. J., McPherson, A., Sussman, J. L., Wang, A. H. J., Seeman, N. C., & Rich, A. (1974a) Science 185, 435-440.
26. Kim, S. H., Sussman, J. L., Suddath, F. L., Quigley, G. J., McPherson, A., Wang, A. H., Seeman, N. C., & Rich, A. (1974b) Proc. Natl. Acad. Sci. U.S.A. 71, 4970-4974.
27. Kunkel, T. A. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 488-492.
28. Liu, H., & Musier-Forsyth, K. (1994) Biochemistry 33, 12708-12714.
29. Liu, H., Peterson, R., Kessler, J., & Musier-Forsyth, K. (1995) Nucleic Acids Res. 23, 165-169.
30. Logan, D. T., Mazauric, M.-H., Kern, D., & Moras, D. (1995) EMBO J. 14, 4156-4167.
31. McClain, W. H., Schneider, J., & Gabriel, K. (1994) Nucleic Acids Res. 22, 522-529.
32. Moras, D. (1992) Trends Biochem. Sci. 17, 159-164.
33. Moras, D. (1993) Biochimie 75, 651-657.
34. Onesti, S., Miller, A. D., & Brick, P. (1995) Structure 3, 163-176.
35. Ploux, O., Lei, Y., & Liu, H. (1995) Biochemistry 34, 4159-4168.
36. Quinn, C. L., Tao, N., & Schimmel, P. (1995) Biochemistry 34, 12489-12495.
37. Richardson, J. S., & Richardson, D. C. (1989) in Prediction of Protein Structure and the Principles of Protein Conformation (Fasman, G. D., Ed.) pp 1-98, Plenum Press, New York.
38. Riddles, P. W., Blakely, R. L., & Zerner, B. (1983) Methods Enzymol. 91, 49-60.
39. Robertus, J. D., Ladner, J. E., Finch, J. T., Rhodes, D., Brown, R. S., Clark, B. F. C., & Klug, A. (1974) Nature 250, 546-551.
40. Rould, M. A., Perona, J. J., Söll, D., & Steitz, T. A. (1989) Science 246, 1135-1142.
41. Rould, M. A., Perona, J. J., Söll, D., & Steitz, T. A. (1991) Nature 352, 213-218.
42. Ruff, M., Krishnaswamy, S., Boeglin, M., Poterszman, A., Mitschler, A., Podjarny, A., Rees, B., Thierry, J. C., & Moras, D. (1991) Science 252, 1682-1689.
43. Saks, M. E., Sampson, J. R., & Abelson, J. N. (1994) Science 263, 191-197.
44. Schimmel, P. (1987) Annu. Rev. Biochem. 56, 125-158.
45. Shi, J.-P., Musier-Forsyth, K., & Schimmel, P. (1994) Biochemistry 33, 5312-5318.
46. Tarr, G. E. (1986) in Methods of Protein Microcharacterization (Shively, J. E., Ed.) pp 155-194, Humana Press, Clifton, NJ.
47. Warshel, A., Schweins, T., & Fothergill, M. (1994) J. Am. Chem. Soc. 116, 8437-8442.