Global topology and stability and local structure and dynamics in a synthetic spin-labeled four-helix bundle protein

Biochemistry

Volumn 36, Issue 10, 1997, Pages 2798-2806

  Gibney, Brian R ^a   Johansson, Jonas S ^a,b   Rabanal, Francesc ^a   Skalicky, Jack J ^c   Wand, A Joshua ^c   Dutton, P Leslie ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b UNIVERSITY OF PENNSYLVANIA   (United States)

^c UNIVERSITY AT BUFFALO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COPROPORPHYRIN; GUANIDINE; HELIX LOOP HELIX PROTEIN;

ALPHA HELIX; AMINO ACID SEQUENCE; ARTICLE; CIRCULAR DICHROISM; ELECTRON SPIN RESONANCE; GEL PERMEATION CHROMATOGRAPHY; HYDROPHOBICITY; INFRARED SPECTROSCOPY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; SPIN LABELING;

AMINO ACID SEQUENCE; CIRCULAR DICHROISM; COPROPORPHYRINS; CYCLIC N-OXIDES; ELECTRON SPIN RESONANCE SPECTROSCOPY; GUANIDINE; GUANIDINES; HELIX-LOOP-HELIX MOTIFS; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; PEPTIDES; PROTEIN CONFORMATION; PROTEIN DENATURATION; PROTEIN STRUCTURE, SECONDARY; SPECTROPHOTOMETRY; SPIN LABELS; THERMODYNAMICS;

EID: 0030929705     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9618225     Document Type: Article

References (62)

1. Bai, Y., Milne, J. S., Mayne, L., & Englander, S. W. (1993) Proteins: Struct., Funct., Genet. 17, 75.
2. Bai, Y., Milne, J. S., Mayne, L., & Englander, S. W. (1994) Proteins: Struct., Funct., Genet. 20, 4.
3. Berliner, L. (1972) Biochemistry 11, 2921.
4. Betz, S. F., & DeGrado, W. F. (1996) Biochemistry 35, 6955.
5. Betz, S. F., Raleigh, D. P., & DeGrado, W. F. (1993) Curr. Opin. Struct. Biol. 3, 601.
6. Bryson, J. W., Betz, S. F., Lu, H. S., Suich, D. J. Zhou, H. X., O'Neil, K. T., & DeGrado, W. F. (1995) Science 270, 935.
7. Chakrabartty, A., Kortemme, T., & Baldwin, R. L. (1994) Protein Sci. 3 843.
8. Chen, Y.-H., Yang, J. T., & Chau, K. H. (1974) Biochemistry 13, 3350.
9. Choma, C. T., Lear, J. T., Nelson, M. J., Dutton, P. L., Robertson, D. E., & DeGrado, W. F. (1994) J. Am. Chem. Soc. 116, 856.
10. DeGrado, W. F., Wasserman, Z. R., & Lear, J. T. (1989). Science 243, 622.
11. Desjarlais, J. R., & Handel, T. M. (1995) Protein Sci. 4, 2006.
12. Dill, K. A., Bromberg, S., Yue, K., Fiebig, K. M., Yee, D. P., Thomas, P. D., & Chan, H. S. (1995) Protein Sci. 4, 561.
13. Ding, H., Moser, C. C., Robertson, D. E., Tokito, M. K., Daldal, F., & Dutton, P. L. (1995) Biochemistry 34, 15979.
14. Dunback, R. L., & Karplus, M. (1994) Nat. Struct. Biol. 1, 334.
15. Englander, S. W., & Kallenbach, N. R. (1984) Q. Rev. Biophys. 16, 521.
16. Farahbakhsh, Z. T., Hideg, K., & Hubbell, W. L. (1993) Science 262, 1416.
17. Fiori, W. R., & Millhauser, G. L. (1995) Biopolymers (Pept. Sci.) 37, 243.
18. Ghadiri, M. R., & Choi, C. (1990) J. Am. Chem. Soc. 112, 1630.
19. Gibney, B. R., Mulholland, S. E., Rabanal, F., & Dutton, P. L. (1995) in Photosynthesis: from Light to Biosphere (Mathis, P., Ed.) Kluwer Press, Boston.
20. Gibney, B. R., Mulholland, S. E., Rabanal, F., & Dutton, P. L. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 15041.
21. Goldman, S. A., Bruno, G. V., Polnaszek, C. F., & Freed, J. H. (1972) J. Chem. Phys. 56, 716.
22. Goldman, S. A., Bruno, G. V., & Freed, J. H. (1973) J. Chem. Phys. 59, 3071.
23. Graddis, T. J., Myszka, D. G., & Chaiken, I. M. (1993) Biochemistry 32, 12664.
24. Handel, T. M., Williams, S. A., & DeGrado, W. F. (1993) Science 261, 879.
25. Hellinga, H. W., & Richards, F. W. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 5803.
26. Ho, S. P., & DeGrado, W. F. (1987) J. Am. Chem. Soc. 109, 6751.
27. Hubbell, W. L., & Altenbach, C. (1994) Curr. Opin. Struct. Biol. 4, 566.
28. Kalsbeck, W. A., Robertson, D. E., Pandey, R. K., Smith, K. M., Dutton, P. L., & Bocian, D. F. (1996) Biochemistry 35, 3429.
29. Kamtekar, S., Schiffer, J. M., Xiong, H., Babik, J. M., & Hecht, M. H. (1993) Science 262, 1680.
30. Klug, C. S., Su, W., Liu, J., Klebba, P. E., & Feix, J. B. (1995) Biochemistry 34, 14230.
31. Lassman, G., Ebert, B., Kuznetsov, A. N., & Damerau, W. (1973) Biochim. Biophys. Acta 310, 298.
32. Lau, S. Y. M., Taneja, A. K., & Hodges, R. S. (1984) J. Biol. Chem. 259, 13253.
33. Liu, J., Rutz, J. M., Klebba, P. E., & Feix, J. B. (1994) Biochemistry 33, 13274.
34. McGregor, M. J., Islam, S. A., & Sternberg, M. J. E. (1987) J. Mol. Biol. 198, 295.
35. Mchaourab, H. S., Hyde, J. S., & Feix, J. B. (1993) Biochemistry 32, 11895.
36. Mchaourab, H. S., Lietzow, M. A., Hideg, K., & Hubbell, W. L. (1996) Biochemistry 35, 7692.
37. Miich, S. M., Martinez, G. V., Fiori, W. R., Todd, A. P., & Millhauser, G. L. (1992) Nature 359, 653.
38. Millhauser, G. L., Fiori, W. R., & Much, S. M. (1995) Methods Enzymol. 246, 589.
39. Mok, Y.-K., De Prat Gay, G., Butler, P. J., & Bycroft, M. (1996) Protein Sci. 5, 310.
40. Morrisett, J. D., & Broomfield, C. A. (1971) J. Am. Chem. Soc. 93, 7297.
41. O'Neil, K. T., & DeGrado, W. F. (1990) Science 250, 646.
42. Pace, C. N. (1986) Methods Enzymol. 131, 266.
43. Rabanal, F., DeGrado, W. F., & Dutton, P. L. ( 1996a) J. Am. Chem. Soc. 118, 473.
44. Rabanal, F., DeGrado, W. F., & Dutton, P. L. (1996b) Tetrahedron Lett. 37, 1347.
45. Rabanal, F., Gibney, B. R., DeGrado, W. F., Moser, C. C, & Dutton, P. L. (1996c) Inorg. Chim Acta. 243, 213.
46. Regan, L., & Clarke, N. D. (1990) Biochemistry 29, 10878.
47. Resek, J. F., Farahbakhsh, Z. T., Hubbell, W. L., & Khorana, H. G. (1993) Biochemistry 32, 12025.
48. Robertson, D. E., Farid, R. S., Moser, C. C., Urbauer, J. L., Mulholland, S. E., Pidikiti, R., Lear, J. L., Wand, A. J., DeGrado, W. F., & Dutton, P. L. (1994) Nature 368, 425.
49. Schneider, D. J., & Freed, J. H. (1989) in Biological Magnetic Resonance, Plenum, New York.
50. Singh, R. J., Feix, J. B., Mchaourah, H. S., Hogg, N., & Kalyanaraman, B. (1995) Arch. Biochem. Biophys. 320, 155.
51. Smith, C. K., & Regan, L. (1995) Science 270, 980.
52. Smythe, M. L., Nakaie, C. R., & Marshall, G. R. (1995) J. Am. Chem. Soc. 117, 10555.
53. Snel, M. M. E., & Marsh, D. (1993) Biochim. Biophys. Acta 1150, 155.
54. Snel, M. M. E., de Kruijff, B., & Marsh, D.(1994) Biochemistry 33, 11150.
55. Struthers, M. D., Cheng, R. P., & Imperiali, B. (1996) Science 271, 342-344.
56. Trumpower, B. L. (1990) J. Biol. Chem. 265, 11409.
57. Voss, J., Hubbell, W. L., & Kaback, H. R. (1995a) Proc. Natl. Acad. Sci. U.S.A. 92, 12300.
58. Voss, J., Salwinski, L., Kaback, H. R., & Hubbell, W. L. (1995b) Proc. Natl. Acad. Sci. U.S.A. 92, 12295.
59. Wade, W. S., Koh, J. S., Han, N., Hoekstra, D. M., & Lerner, R. A. (1993) J. Am. Chem. Soc. 115, 4449.
60. Wand, A. J., Roder, H., & Englander, S. W. (1986) Biochemistry 25, 1107.
61. Zhou, N. E., Kay, C. M., & Hodges, R. S. (1992) J. Biol. Chem. 267, 2664.
62. Zhou, N. E., Kay, C. M., Sykes, B. D., & Hodges, R. S. (1993) Biochemistry 32, 6190.