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Volumn 14, Issue 6, 1997, Pages 595-601

Molecular evolution of cytochrome c oxidase: Rate variation among subunit VIa isoforms

Author keywords

gene duplication; isoforms; Mitochondria; phylogenetics

Indexed keywords

CYTOCHROME C OXIDASE;

EID: 0030924878     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025798     Document Type: Article
Times cited : (28)

References (50)
  • 1
    • 0027406438 scopus 로고
    • Tissue-specific regulation of bovine heart cytochrome c oxidase activity by ADP via interaction with subunit VIa
    • ANTHONY, G., A. REIMANN, and B. KADENBACH. 1993. Tissue-specific regulation of bovine heart cytochrome c oxidase activity by ADP via interaction with subunit VIa. Proc. Natl. Acad. Sci. USA 90:1652-1656.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 1652-1656
    • Anthony, G.1    Reimann, A.2    Kadenbach, B.3
  • 3
    • 0027374223 scopus 로고
    • Expression of human cytochrome c oxidase subunits during fetal development
    • BONNE, G., P. SEIBEL, S. POSSEKEL, C. MARSAC, and B. KADENBACH. 1993. Expression of human cytochrome c oxidase subunits during fetal development. Eur. J. Biochem. 217:1099-1107.
    • (1993) Eur. J. Biochem. , vol.217 , pp. 1099-1107
    • Bonne, G.1    Seibel, P.2    Possekel, S.3    Marsac, C.4    Kadenbach, B.5
  • 4
    • 0000367652 scopus 로고
    • The limits of amino acid sequence data in Angiosperm phylogenetic reconstructions
    • BREMER, K. 1988. The limits of amino acid sequence data in Angiosperm phylogenetic reconstructions. Evolution 42: 795-803.
    • (1988) Evolution , vol.42 , pp. 795-803
    • Bremer, K.1
  • 5
    • 0025322981 scopus 로고
    • Structure and function of cytochrome c oxidase
    • CAPALDI, R. A. 1990. Structure and function of cytochrome c oxidase. Annu. Rev. Biochem. 59:569-596.
    • (1990) Annu. Rev. Biochem. , vol.59 , pp. 569-596
    • Capaldi, R.A.1
  • 6
    • 0017813834 scopus 로고
    • Evolution of homeothermy in mammals
    • CROMPTON, A. W., C. R. TAYLOR, and J. A. JAGGER. 1978. Evolution of homeothermy in mammals Nature 272:333-336.
    • (1978) Nature , vol.272 , pp. 333-336
    • Crompton, A.W.1    Taylor, C.R.2    Jagger, J.A.3
  • 8
    • 0027443251 scopus 로고
    • Rapid purification of bacteriophage lambda DNA
    • DONOVAN, J., X. LU, and L. NAGARAJAN. 1993. Rapid purification of bacteriophage lambda DNA. Biotechniques 15: 602-604.
    • (1993) Biotechniques , vol.15 , pp. 602-604
    • Donovan, J.1    Lu, X.2    Nagarajan, L.3
  • 9
    • 0025064035 scopus 로고
    • The pattern of mammalian evolution and the relative rate of molecular evolution
    • EASTEAL, S. 1990. The pattern of mammalian evolution and the relative rate of molecular evolution. Genetics 124:165-173.
    • (1990) Genetics , vol.124 , pp. 165-173
    • Easteal, S.1
  • 10
    • 0020424165 scopus 로고
    • Regulation of cellular energy metabolism
    • ERECINSKA, M. and D. F. WILSON. 1982. Regulation of cellular energy metabolism. J. Membr. Biol. 70:1-14.
    • (1982) J. Membr. Biol. , vol.70 , pp. 1-14
    • Erecinska, M.1    Wilson, D.F.2
  • 11
    • 0026046659 scopus 로고
    • Switching of bovine cytochrome c oxidase subunit VIa isoforms in skeletal muscle during development
    • EWART, G. D., Y. Z. ZHANG, and R. A. CAPALDI. 1991. Switching of bovine cytochrome c oxidase subunit VIa isoforms in skeletal muscle during development. FEBS Lett. 292:79-84.
    • (1991) FEBS Lett. , vol.292 , pp. 79-84
    • Ewart, G.D.1    Zhang, Y.Z.2    Capaldi, R.A.3
  • 13
    • 0026640955 scopus 로고
    • Differential expression of genes specifying two isoforms of subunit VIa of human cytochrome c oxidase
    • FABRIZI, G. M., J. SADLOCK, M. HIRANO, S. MITA, Y. KOGA, R. RIZZUTO, M. ZEVIANI, and E. A. SCHON. 1992. Differential expression of genes specifying two isoforms of subunit VIa of human cytochrome c oxidase. Gene 119:307-312.
    • (1992) Gene , vol.119 , pp. 307-312
    • Fabrizi, G.M.1    Sadlock, J.2    Hirano, M.3    Mita, S.4    Koga, Y.5    Rizzuto, R.6    Zeviani, M.7    Schon, E.A.8
  • 14
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 15
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees
    • FITCH, W. M., and E. MARGOLIASH. 1967. Construction of phylogenetic trees. Science 155:279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 16
    • 0029670481 scopus 로고    scopus 로고
    • Regulation of the h+/e(-) stoichiometry of cytochrome c oxidase from bovine heart by intramitochondrial ATP/ADP ratios
    • FRANK, V. and B. KADENBACH. 1996. Regulation of the h+/e(-) stoichiometry of cytochrome c oxidase from bovine heart by intramitochondrial ATP/ADP ratios. FEBS Lett. 382:121-124.
    • (1996) FEBS Lett. , vol.382 , pp. 121-124
    • Frank, V.1    Kadenbach, B.2
  • 17
    • 0019345874 scopus 로고
    • Decoding the pattern of protein evolution
    • GOODMAN, M. 1981. Decoding the pattern of protein evolution. Prog. Biophys. Mol. Biol. 37:105-164.
    • (1981) Prog. Biophys. Mol. Biol. , vol.37 , pp. 105-164
    • Goodman, M.1
  • 18
    • 0026428609 scopus 로고
    • Is the guinea-pig a rodent?
    • GRAUR, D., W. A. HIDE, and W.-H. LI. 1991. Is the guinea-pig a rodent? Nature 351:649-652.
    • (1991) Nature , vol.351 , pp. 649-652
    • Graur, D.1    Hide, W.A.2    Li, W.-H.3
  • 19
    • 0026550202 scopus 로고
    • The biochemical phylogeny of guinea-pigs and gundis, and the papaphyly of the order rodentia
    • GRAUR, D., W. A. HIDE, A. ZHARKIKH, and W.-H. LI. 1992. The biochemical phylogeny of guinea-pigs and gundis, and the papaphyly of the order rodentia. Comp. Biochem. Physiol. 101B:495-498.
    • (1992) Comp. Biochem. Physiol. , vol.101 B , pp. 495-498
    • Graur, D.1    Hide, W.A.2    Zharkikh, A.3    Li, W.-H.4
  • 20
    • 0028893675 scopus 로고
    • Cloning, sequence analysis, and expression of a mouse cDNA encoding cytochrome c oxidase subunit VIa liver isoform
    • GROSSMAN, L. I., N. H. ROSENTHAL, M. AKAMATSU, and R. P. ERICKSON. 1995. Cloning, sequence analysis, and expression of a mouse cDNA encoding cytochrome c oxidase subunit VIa liver isoform. Biochim. Biophys. Acta 1260:361-364.
    • (1995) Biochim. Biophys. Acta , vol.1260 , pp. 361-364
    • Grossman, L.I.1    Rosenthal, N.H.2    Akamatsu, M.3    Erickson, R.P.4
  • 21
    • 0029888297 scopus 로고    scopus 로고
    • Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families
    • HASTINGS, K. E. M. 1996. Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families. J. Mol. Evol. 42: 631-640.
    • (1996) J. Mol. Evol. , vol.42 , pp. 631-640
    • Hastings, K.E.M.1
  • 22
    • 0021891869 scopus 로고
    • The mitochondrial electron transport and oxidative phosphorylation system
    • HATEFI, Y. 1985. The mitochondrial electron transport and oxidative phosphorylation system. Annu. Rev. Biochem. 54: 1015-1069.
    • (1985) Annu. Rev. Biochem. , vol.54 , pp. 1015-1069
    • Hatefi, Y.1
  • 23
    • 0026562079 scopus 로고
    • The number of replications needed for accurate estimation of the bootstrap p value in phylogenetic studies
    • HEDGES, S. B. 1992. The number of replications needed for accurate estimation of the bootstrap p value in phylogenetic studies. Mol. Biol. Evol. 9:366-369.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 366-369
    • Hedges, S.B.1
  • 24
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • HIGGINS, D. G., and P. M. SHARP. 1989. Fast and sensitive multiple sequence alignments on a microcomputer. Comput Appl. Biosci. 5:151-153.
    • (1989) Comput Appl. Biosci. , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 25
    • 0028165415 scopus 로고
    • Turbinates in therapsids: Evidence for late Permian origins of mammalian endothermy
    • HILLENIUS, W. J. 1994. Turbinates in therapsids: evidence for late Permian origins of mammalian endothermy. Evolution 48:207-229.
    • (1994) Evolution , vol.48 , pp. 207-229
    • Hillenius, W.J.1
  • 26
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • N. H. MUNRO, ed. Academic Press, New York, N.Y.
    • JUKES, T. H., and C. R. CANTOR. 1969. Evolution of protein molecules. Pp. 21-132 in N. H. MUNRO, ed. Mammalian protein metabolism. Academic Press, New York, N.Y.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 28
    • 84969003434 scopus 로고
    • Evolution of a regulatory enzyme: Cytochrome c oxidase (complex IV)
    • KADENBACH, B., L. KUHN-NENTWIG, and U. BUGE. 1987. Evolution of a regulatory enzyme: cytochrome c oxidase (complex IV). Curr. Top. Bioenerg. 15:114-162.
    • (1987) Curr. Top. Bioenerg. , vol.15 , pp. 114-162
    • Kadenbach, B.1    Kuhn-Nentwig, L.2    Buge, U.3
  • 31
    • 0003496662 scopus 로고
    • Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park
    • KUMAR, S., K. TAMURA, and M. NEI. 1993. MEGA: molecular evolutionary genetics analysis. Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park.
    • (1993) MEGA: Molecular Evolutionary Genetics Analysis
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 32
    • 0028039364 scopus 로고
    • Evolution of tissue-specific gene expression in mammals
    • MCCARREY, J. R. 1994. Evolution of tissue-specific gene expression in mammals. BioScience 44:20-27.
    • (1994) BioScience , vol.44 , pp. 20-27
    • Mccarrey, J.R.1
  • 33
    • 0028207399 scopus 로고
    • Structural organization of the rat genes encoding liver- and heart-type cytochrome c oxidase subunit VIa and a pseudogene related to COX VIa-L cDNA
    • MELL, O. C., P. SEIBEL, and B. KADENBACH. 1994. Structural organization of the rat genes encoding liver-and heart-type cytochrome c oxidase subunit VIa and a pseudogene related to COX VIa-L cDNA. Gene 140:179-186.
    • (1994) Gene , vol.140 , pp. 179-186
    • Mell, O.C.1    Seibel, P.2    Kadenbach, B.3
  • 34
    • 0017358613 scopus 로고
    • Alignment statistic for identifying related protein sequences
    • MOORE, G. W., and M. GOODMAN. 1977. Alignment statistic for identifying related protein sequences. J. Mol. Evol. 9: 121-130.
    • (1977) J. Mol. Evol. , vol.9 , pp. 121-130
    • Moore, G.W.1    Goodman, M.2
  • 35
  • 36
    • 0029894544 scopus 로고    scopus 로고
    • Nuclear-mitochondrial interactions
    • POYTON, R. O., and J. E. MCEWEN. 1996. Nuclear-mitochondrial interactions. Annu. Rev. Biochem. 65:563-607.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 563-607
    • Poyton, R.O.1    Mcewen, J.E.2
  • 37
    • 0024397556 scopus 로고
    • Expression and function of cytochrome c oxidase subunit isologues. Modulators of cellular energy production. Cytochrome oxidase: Structure, function and physiology
    • POYTON, R. O., C. E. TRUEBLOOD, R. M. WRIGHT, and L. E. FARRELL. 1988. Expression and function of cytochrome c oxidase subunit isologues. Modulators of cellular energy production. Cytochrome oxidase: structure, function and physiology. Ann. N.Y. Acad. Sci. 550:289-307.
    • (1988) Ann. N.Y. Acad. Sci. , vol.550 , pp. 289-307
    • Poyton, R.O.1    Trueblood, C.E.2    Wright, R.M.3    Farrell, L.E.4
  • 38
    • 0027166168 scopus 로고
    • Tissue-specific regulation of cytochrome c oxidase efficiency by nucleotides
    • ROHDICH, F., and B. KADENBACH. 1993. Tissue-specific regulation of cytochrome c oxidase efficiency by nucleotides. Biochemistry 32:8499-8503.
    • (1993) Biochemistry , vol.32 , pp. 8499-8503
    • Rohdich, F.1    Kadenbach, B.2
  • 39
    • 0026010913 scopus 로고
    • Evolutionary analysis of the nucleus-encoded subunits of mammalian cytochrome c oxidase
    • SACCONE, C., G. PESOLE, and B. KADENBACH. 1991. Evolutionary analysis of the nucleus-encoded subunits of mammalian cytochrome c oxidase. Eur. J. Biochem. 195:151-156.
    • (1991) Eur. J. Biochem. , vol.195 , pp. 151-156
    • Saccone, C.1    Pesole, G.2    Kadenbach, B.3
  • 40
    • 0024064493 scopus 로고
    • Characterization of two different genes (cDNA) for cytochrome c oxidase subunit VIa from heart and liver of the rat
    • SCHLERF, A., M. DROSTE, M. WINTER, and B. KADENBACH. 1988. Characterization of two different genes (cDNA) for cytochrome c oxidase subunit VIa from heart and liver of the rat. EMBO J. 7:2387-2391.
    • (1988) EMBO J. , vol.7 , pp. 2387-2391
    • Schlerf, A.1    Droste, M.2    Winter, M.3    Kadenbach, B.4
  • 41
    • 0025758446 scopus 로고
    • The cDNA for the heart/muscle isoform of bovine cytochrome-c oxidase subunit VIa encodes a presequence
    • SMITH, E. O., D. M. BEMENT, L. I. GROSSMAN, and M. I. LOMAX. 1991. The cDNA for the heart/muscle isoform of bovine cytochrome-c oxidase subunit VIa encodes a presequence. Biochim. Biophys. Acta 1089:266-268.
    • (1991) Biochim. Biophys. Acta , vol.1089 , pp. 266-268
    • Smith, E.O.1    Bement, D.M.2    Grossman, L.I.3    Lomax, M.I.4
  • 42
    • 0027320697 scopus 로고
    • Structural organization of the bovine gene for the heart/muscle isoform of cytochrome c oxidase subunit VIa
    • SMITH, E. O., and M. I. LOMAX. 1993. Structural organization of the bovine gene for the heart/muscle isoform of cytochrome c oxidase subunit VIa. Biochim. Biophys. Acta 1174:63-71.
    • (1993) Biochim. Biophys. Acta , vol.1174 , pp. 63-71
    • Smith, E.O.1    Lomax, M.I.2
  • 43
    • 0025057280 scopus 로고
    • Nucleotide sequence determination of mouse, chicken and Xenopus laevis rig cDNAs: The rig-encoded protein is extremely conserved during vertebrate evolution
    • SUGAWARA, A., K. NATA, C. INOUE, S. TAKASAWA, H. YAMAMOTO, and H. OKAMOTO. 1990. Nucleotide sequence determination of mouse, chicken and Xenopus laevis rig cDNAs: the rig-encoded protein is extremely conserved during vertebrate evolution. Biochem. Biophys. Res. Commun. 166:1501-1507.
    • (1990) Biochem. Biophys. Res. Commun. , vol.166 , pp. 1501-1507
    • Sugawara, A.1    Nata, K.2    Inoue, C.3    Takasawa, S.4    Yamamoto, H.5    Okamoto, H.6
  • 45
    • 0027209265 scopus 로고
    • Subunit VIa of yeast cytochrome c oxidase is not necessary for assembly of the enzyme complex but modulates the enzyme activity - Isolation and characterization of the nuclear-coded gene
    • TAANMAN, J. W., and R. A. CAPALDI. 1993. Subunit VIa of yeast cytochrome c oxidase is not necessary for assembly of the enzyme complex but modulates the enzyme activity - isolation and characterization of the nuclear-coded gene. J. Biol. Chem. 268:18754-18761.
    • (1993) J. Biol. Chem. , vol.268 , pp. 18754-18761
    • Taanman, J.W.1    Capaldi, R.A.2
  • 46
    • 0026631610 scopus 로고
    • Steady-state transcript levels of cytochrome c oxidase genes during human myogenesis indicate subunit switching of subunit VIa and co-expression of subunit VIIa isoforms
    • TAANMAN, J. W., N. H. HERZBERG, H. DEVRIES, P. A. BOLHUIS, and C. VAN DEN BOGERT. 1992. Steady-state transcript levels of cytochrome c oxidase genes during human myogenesis indicate subunit switching of subunit VIa and co-expression of subunit VIIa isoforms. Biochim. Biophys. Acta 1139:155-162.
    • (1992) Biochim. Biophys. Acta , vol.1139 , pp. 155-162
    • Taanman, J.W.1    Herzberg, N.H.2    Devries, H.3    Bolhuis, P.A.4    Van Den Bogert, C.5
  • 47
    • 0004783940 scopus 로고
    • A "housekeeping" gene on the X chromosome encodes a protein similar to ubiquitin
    • TONIOLO, D., M. PERSICO, and M. ALCALAY. 1988. A "housekeeping" gene on the X chromosome encodes a protein similar to ubiquitin. Proc. Natl. Acad. Sci. USA 85:851-855.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 851-855
    • Toniolo, D.1    Persico, M.2    Alcalay, M.3
  • 49
    • 0025268641 scopus 로고
    • Demonstration of 2 isoforms of subunit-VIIa of cytochrome c oxidase from human skeletal muscle - Implications for mitochondrial myopathies
    • VAN BEEUMEN, J. J., A. B. P. VAN KUILENBURG, S. VAN BUN, C. VAN DEN BOGERT, J. M. TAGER, and A. O. MUIJSERS. 1990. Demonstration of 2 isoforms of subunit-VIIa of cytochrome c oxidase from human skeletal muscle - implications for mitochondrial myopathies. FEBS Lett. 263:213-216.
    • (1990) FEBS Lett. , vol.263 , pp. 213-216
    • Van Beeumen, J.J.1    Van Kuilenburg, A.B.P.2    Van Bun, S.3    Van Den Bogert, C.4    Tager, J.M.5    Muijsers, A.O.6
  • 50
    • 0028799005 scopus 로고
    • Structural characterization and regulatory element analysis of the heart isoform of cytochrome c oxidase VIa
    • WAN, B., and R. W. MOREADITH. 1995. Structural characterization and regulatory element analysis of the heart isoform of cytochrome c oxidase VIa. J. Biol. Chem. 270:26433-26440.
    • (1995) J. Biol. Chem. , vol.270 , pp. 26433-26440
    • Wan, B.1    Moreadith, R.W.2


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