Human Lysyl-tRNA synthetase accepts nucleotide 73 variants and rescues Escherichia coli double-defective mutant

Journal of Biological Chemistry

Volumn 272, Issue 36, 1997, Pages 22809-22816

  Shiba, Kiyotaka ^a,b   Stello, Timothy ^c   Motegi, Hiromi ^a   Noda, Tetsuo ^a   Musier Forsyth, Karin ^c   Schimmel, Paul ^d  

^a CANCER INSTITUTE   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c UNIVERSITY OF MINNESOTA   (United States)

^d MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

LYSINE; LYSINE TRANSFER RNA LIGASE; NUCLEOTIDE;

AMINOACYLATION; ARTICLE; BACTERIUM MUTANT; ESCHERICHIA COLI; GENETIC COMPLEMENTATION; NONHUMAN; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; DNA, COMPLEMENTARY; ESCHERICHIA COLI; HUMANS; LYSINE-TRNA LIGASE; MOLECULAR SEQUENCE DATA; MUTAGENESIS; NUCLEIC ACID CONFORMATION; RNA, TRANSFER, LYS; SEQUENCE HOMOLOGY, AMINO ACID;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA;

EID: 0030921858     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.272.36.22809     Document Type: Article

References (59)

1. Kim, S. H., Suddath, F. L., Quigley, G. J., McPherson, A., Sussman, J. L., Wang, A. H., Seeman, N. C., and Rich, A. (1974) Adv. Enzymol. 185, 435-440
2. Francklyn, C., and Schimmel, P. (1989) Nature 337, 478-481
3. Martinis, S. A., and Schimmel, P. (1995) in tRNA: Structure, Biosynthesis, and Function (Soil, D., and RajBhandary, U. L., eds) pp. 349-370, American Society for Microbiology Press, Washington, D. C.
4. Schimmel, P. (1995) J. Mol. Evol. 40, 531-536
5. Schimmel, P., and Ribas de Pouplana, L. (1995) Cell 81, 983-986
6. Crothers, D. M., Seno, T., and Soil, D. (1972) Proc. Natl. Acad. Sci. U. S. A. 69, 3063-3067
7. Lee, C. P., Mandal, N., Dyson, M. R., and RajBhandary, U. L. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 7149-7152
8. Cavarelli, J., Rees, B., Ruff, M., Thierry, J.-C., and Moras, D. (1993) Nature 362, 181-184
9. Ruff, M., Krishnaswamy, S., Boeglin, M., Poterszman, A., Mitschler, A., Podjarny, A., Rees, B., Thierry, J. C., and Moras, D. (1991) Science 252, 1682-1689
10. Eriani, G., Delarue, M., Poch, O., Gangloff, J., and Moras, D. (1990) Nature 347, 203-206
11. Frugier, M., Florentz, C., and Giegé, R. (1994) EMBO J. 13, 2218-2226
12. Shi, J.-P., Francklyn, C., Hill, K., and Schimmel, P. (1990) Biochemistry 29, 3621-3626
13. McClain, W. H., Foss, K., Jenkins, R. A., and Schneider, J. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 6147-51
14. Francklyn, C., Shi, J.-P., and Schimmel, P. (1992) Science 255, 1121-1125
15. Hipps, D., Shiba, K., Henderson, B., and Schimmel, P. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 5550-5552
16. McClain, W. H., Schneider, J., and Gabriel, K. (1994) Nucleic Acids Res. 22, 522-529
17. Liu, H. J., Peterson, R., Kessler, J., and Musier-Forsyth, K. (1995) Nucleic Acids Res. 23, 165-169
18. Yan, W., and Francklyn, C. (1994) J. Biol. Chem. 269, 10022-10027
19. Li, S., Pelka, H., and Schulman, L. H. (1993) J. Biol. Chem. 268, 18335-18339
20. Achsel, T., and Gross, H. J. (1993) EMBO J. 12, 3333-3338
21. Saks, M. E., and Sampson, J. R. (1996) EMBO J. 15, 2843-2849
22. Onesti, S., Miller, A. D., and Brick, P. (1995) Structure 3, 163-176
23. Tamura, K., Himeno, H., Asahara, H., Hasegawa, T., and Shimizu, M. (1992) Nucleic Acids Res. 20, 2335-2339
24. McClain, W. H., and Foss, K. (1988) J. Mol. Biol. 202, 697-709
25. Steinberg, S., Misch, A., and Sprinzl, M. (1993) Nucleic Acids Res. 21, 3011-3015
26. Mirande, M., and Waller, J.-P. (1988) J. Biol. Chem. 263, 18443-18451
27. Shiba, K., Schimmel, P., Motegi, H., and Noda, T. (1994) J. Biol. Chem. 269, 30049-30055
28. Shiba, K., Suzuki, N., Shigesada, K., Namba, Y., Schimmel, P., and Noda, T. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 7435-7439
29. Shiba, K., Ripmaster, T., Suzuki, N., Nichols, R., Plotz, P., Noda, T., and Schimmel, P. (1995) Biochemistry 34, 10340-10349
30. Dumas, J. B., Edwards, M., Delort, J., and Mallet, J. (1991) Nucleic Acids Res. 19, 5227-5232
31. Needleman, S. B., and Wunsch, C. D. (1970) J. Mol. Biol. 48, 443-453
32. Studier, F. W., Rosenberg, A. H., and Dunn, J. J. (1990) Methods Enzymol. 185, 60-89
33. Mead, D. A., Szczesna-Skorupa, E., and Kemper, B. (1986) Protein Eng. 1, 67-74
34. Chen, J. S., Brevet, A., Lapadattapolsky, M., Blanquet, S., and Plateau, P. (1994) J. Bacteriol. 176, 2699-2705
35. Bolivar, F., Rodriguez, R. L., Greene, P. J., Betlach, M. C., Heyneker, H. L., and Boyer, H. W. (1977) Gene (Amst.) 2, 95-113
36. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254
37. Sampson, J. R., and Uhlenbeck, O. C. (1988) Proc. Natl. Acad. Sci. U. S. A. 85,
38. Liu, M., and Horowitz, J. (1993) BioTechniques 15, 264-266
39. Grodberg, J., and Dunn, J. J. (1988) J. Bacteriol. 170, 1245-1253
40. Liu, H. J., and Musier-Forsyth, K. (1994) Biochemistry 33, 12708-12714
41. Shiba, K., and Schimmel, P. (1992) J. Biol. Chem. 267, 22703-22706
42. Chan, V. L., and Bingham, H. L. (1992) J. Bacteriol. 174, 695-701
43. Lévêque, F., Plateau, P., Dessen, P., and Blanquet, S. (1990) Nucleic Acids Res. 18, 305-312
44. Kawakami, K., Naito, S., Inoue, N., Nakamura, Y., Ikeda, H., and Uchida, H. (1989) Mol. Gen. Genet. 219, 333-340
45. Clark, R. L., and Neidhardt, F. C. (1990) J. Bacteriol. 172, 3237-3243
46. Kozak, M. (1986) Cell 44, 283-292
47. Starzyk, R. M., Webster, T. A., and Schimmel, P. (1987) Science 237, 1614-1618
48. Lin, L., Hale, S. P., and Schimmel, P. (1996) Nature 384, 33-34
49. Bult, C. J., White, O., Olsen, G. J., Zhou, L. X., Fleischmann, R. D., Sutton, G. G., Blake, J. A., Fitzgerald, L. M., Clayton, R. A., Gocayne, J. D., Kerlavage, A. R., Dougherty, B. A., Tomb, J. F., Adams, M. D., Reich, C. I., Overbeek, R., Kirkness, E. F., Weinstock, K. G., Merrick, J. M., Glodek, A., Scott, J. L., Geoghagen, N. S. M., Weidman, J. F., Fuhrmann, J. L., Nguyen, D., Utterback, T. R., Kelley, J. M., Peterson, J. D., Sadow, P. W., Hanna, M. C., Cotton, M. D., Roberts, K. M., Hurst, M. A., Kaine, B. P., Borodovsky, M., Klenk, H. P., Fraser, C. M., Smith, H. O., Woese, C. R., and Venter, J. C. (1996) Science 273, 1058-1073
50. Saluta, M. V., and Hirshfield, I. N. (1995) J. Bacteriol. 177, 1872-1878
51. Kawakami, K., Ito, K., and Nakamura, Y. (1992) Mol. Microbiol. 6, 1739-1745
52. Hamilton, C. M., Aldea, M., Washburn, B. K., Babitzke, P., and Kushner, S. R. (1989) J. Bacteriol. 171, 4617-4622
53. Nada, S., Chang, P. K., and Dignam, J. D. (1993) J. Biol. Chem. 268, 7660-7667
54. Auld, D. S., and Schimmel, P. (1995) Science 267, 1994-1996
55. Hedgcoth, C., Hayenga, K., Harrison, M., and Ortwerth, B. J. (1984) Nucleic Adds Res. 12, 2535-2541
56. Isel, C., Lanchy, L.-M., Le Grice, S. F. J., Ehresmann, C., Ehresmann, B., and Marquet, R. (1996) EMBO J. 15, 917-924
57. Agou, F., Quevillon, S., Kerjan, P., Latreille, M. T., and Mirande, M. (1996) Biochemistry 35, 15322-15331
58. Mirande, M. (1991) Prog. Nucleic Acid Res. Mol. Biol. 40, 95-142
59. Martinez, R., and Mirande, M. (1992) Eur. J. Biochem. 207, 1-11