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note
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-/- mice and reverse transcribed with mouse UG-specific primer, mPr (5′-ATC TTG CTT ACA CAG AGG ACT TG-3′). The PCR product was further amplified with primers mPl (5′-ATC GCC ATC ACA ATC ACT GT-3′) and mPr. The PCR product was hybridized with an oligonucleotide probe, mPp (5′-ATC AGA GTC TGG TTA TGT GGC ATC C-3′), derived from exon-2 of the UG gene sequence. The primers and the probe used in mouse glyceraldehyde phosphate dehydrogenase (GAPDH) RT-PCR are as follows: mGAPDH-r (5′-GGC ATC GAA GGT GGA AGA GT-3′); mGAPDH-l (5′-ATG GCC TTC CGT GTT CCT AC-3′); and mGAPDH-p (5′-GAA GGT GGT GAA GCA GGC ATC TGA GG-3′).
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30
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0003448569
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Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, ed. 1
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-/- mice were prepared by homogenizing tissue samples in a buffer (10 mM tris-HCl, pH 7.5, 1% Triton X-100, 0.2% deoxycholate, 150 mM NaCl, 5 mM EDTA) containing 2 mM phenylmethylsulfonyl fluoride and 20 μg/ml each of aprotinin, leupeptin, and pepstatin A. The homogenates were centrifuged at 17,500g for 30 min at 4° and immunoprecipitated as described [E. Harlow and D. Lane, Antibodies: A Laboratory Manual (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, ed. 1, 1988)] by incubating tissue lysates or plasma proteins (1 mg/ml) with rabbit antibody to murine Fn (anti-Fn) (1:100 dilution). Coimmunoprecipitation of purified murine Fn and recombinant human UG [G. Mantile et al., J. Biol. Chem. 267, 20343 (1993)] was performed by incubating equimolar concentrations of Fn with UG in the presence of 10% glycerol, 50 mM tris-HCl, pH 7.5, 250 mM NaCl, and 4.3 mM sodium phosphate at 4°C for 1 hour, followed by the addition of anti-Fn (1:100 dilution). Equal amounts of extracted tissue proteins (30 μg) or immunoprecipitates were resolved either on 4 to 20% gradient or 6% SDS-polyacrylamide gels under reducing conditions, followed by protein immunoblotting with either anti-Fn (1:2000 dilution) or rabbit antibodies to murine UG (anti-UG) (1:2000 dilution).
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Antibodies: A Laboratory Manual
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0027304022
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1842301892
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note
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51. The rabbit antibody to murine Fn (Gibco-BRL) was used at a dilution of 1:1000, and the antibody to UG was used at 1:500.
-
-
-
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33
-
-
1842285601
-
-
note
-
-/- mouse, with glomerular lesions, was fixed in formalin and embedded in epoxy resin. Thin sections stained with uranyl acetate and lead citrate were examined with an electron microscope. Photomicrographs were taken either at x6000 or at x60,000.
-
-
-
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34
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1842341979
-
-
note
-
Formalin-fixed tissue sections were used for immunofluorescence as described (5) with anti-Fn and fluorescein isothiocyanate (FITC)-conjugated goat antibody to rabbit IgG. Similarly, immunofluorescence studies with antibodies specific for Fn, collagens I and III. vitronectin, laminin, and osteopontin were also done. Epifluorescence was photographed with a Zeiss Axiophot microscope.
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1842312340
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2 were determined.
-
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43
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1842316058
-
-
note
-
125I-collagen I (specific activity of 65.4 μCi/μg) was incubated with Fn in presence of reduced UG (250 μg), affinity cross-linked, electrophoresed, and autoradiographed.
-
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-
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44
-
-
1842400193
-
-
note
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+/+ mice were injected with 1 mg of Fn alone in 150 μl of PBS daily for three consecutive days.
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46
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1842379710
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unpublished results
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Z. Zhang et al., unpublished results.
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Zhang, Z.1
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Fn matrix assembly and fibrillogenesis in cultured cells (CRL6336, American Type Culture Collection) were determined as described [D. F. Mosher, J. Sottile, C. Wu, J. A. McDonald, Curr. Biol. 4, 810 (1992)].
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Krapf, R.5
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52
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0030063963
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A Bam HI-Eco RI 3.2-kb DNA fragment containing exon-3 of 129/SVJ mouse UG gene (14) and its flanking sequences were subcloned into the corresponding site of the pPNW vector as described [K. Lei et al., Nature Genet. 13, 203 (1996)]. A 0.9-kb PCR-amplifed fragment containing partial exon-2 and its flanking sequences with built-in Not I and Xho I sites were subcloned into the vector to generate the targeted construct pPNWUG. In pPNWUG, a 1.2-kb DNA fragment, including partial exon-2. was replaced with the PGK-neo cassette, disrupting the UG gene. Not I-linearized targeting construct DNA (25 μg) was electroporated into ES R1 cells. Chimeric mice were mated with C57BL/6 strain of mice, and germline transmission of the mutated UG allele was identified by PCR and Southern blot analyses of offspring tail DNA. The genotyping of progeny was carried out by PCR with a set of neo-specific primers, neo-L (5′-ATA CGC TTG ATC CGG CTA CCT GCC-3′) and neo-R (5′-CAT TTG CAC TGC CGG TAG AAC TCC-3′), which yield a 667-base pair (bp) DNA fragment. A 304-bp DNA fragment was generated with a set of UG-specific primers, mUG-L (5′-ACA TCA TGA AGC TCA CAG GTA TGC-3′) and mUG-R (5′-GTG TGC ACG GTT CAA GCT TGT AGT-3′), derived from the region of the UG gene that was replaced by the PGK-neo cassette. After an initial denaturing step (95°C for 2 min), 40 cycles of PCR were performed (94°C for 1 min, 58°C for 1.5 min. 72°C for 1 min) with a final step at 72°C for 10 min, by using a Perkin-Elmer 480 DNA thermal cycler.
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(1996)
Nature Genet.
, vol.13
, pp. 203
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Lei, K.1
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53
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1842350708
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note
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The contributions of G.C.K. and C.-J.Y. in delineating the mechanism of UG action should be considered equal. We thank A. Nagy, R. Nagy, and W. Abramow-Newerly for ES R1 cells; L. Miele for statistical analyses; L. Miele and G. Mantile-Selvaggi for facilitating recombinant UG production in Escherichia coli; A. Kulkami, K. M. Yamada, J. Chou, I. Owens, S. W. Levin, J. DeB. Butler, K.-J. Lei, and C.-J. Pan for their assistance, discussions, and suggestions, and Syntex Research for gancyclovir. Supported in part by a USPHS grant (number HL47620 to F.D.).
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