Genomic diversity and evolution of papillomaviruses in rhesus monkeys

Journal of Virology

Volumn 71, Issue 7, 1997, Pages 4938-4943

  Chan, Shih Yen ^a   Bernard, Hans Ulrich ^a   Ratterree, Marion ^b   Birkebak, Ted A ^c   Faras, Anthony J ^d   Ostrow, Ronald S ^d  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^b TULANE NATIONAL PRIMATE RESEARCH CENTER   (United States)

^c UNIVERSITY OF WASHINGTON   (United States)

^d UNIVERSITY OF MINNESOTA MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EVOLUTION; NONHUMAN; PAPILLOMA VIRUS; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RHESUS MONKEY; VIRUS CHARACTERIZATION;

EID: 0030910250     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.7.4938-4943.1997     Document Type: Article

References (41)

1. Andrews, P. 1992. Evolution and environment in the Hominoidea. Nature 360:641-646.
2. Bernard, H. U., S. Y. Chan, and H. Delius. 1994. Evolution of papillomaviruses. Curr. Top. Microbiol. Immunol. 186:33-54.
3. Bernard, H. U., S. Y. Chan, M. M. Manos, C. K. Ong, L. L. Villa, H. Delius, H. M. Bauer, C. Peyton, and C. M. Wheeler. 1994. Assessment of known and novel human papillomaviruses by polymerase chain reaction, restriction digest, nucleotide sequence, and phylogenetic algorithms. J. Infect. Dis. 170: 1077-1085.
4. Bloch, N., M. Breen, and P. B. Spradbrow. 1994. Genomic sequences of bovine papillomavirus in formalin-fixed sarcoids from Australian horses revealed by polymerase chain reaction. Vet. Microbiol. 41:163-172.
5. Chan, S.-Y., H.-U. Bernard, C.-K. Ong, S.-P. Chan, B. Hofmann, and H. Delius. 1992. Phylogenetic analysis of 48 papillomavirus types and 28 subtypes and variants: a showcase for the molecular evolution of DNA viruses. J. Virol. 66:5714-5725.
6. Chan, S.-Y., H. Delius, A. L. Halpern, and H.-U. Bernard. 1995. Analysis of genomic sequences of 95 papillomavirus types: uniting typing, phylogeny, and taxonomy. J. Virol. 69:3074-3083.
7. Chan, S. Y., R. S. Ostrow, A. J. Faras, and H. U. Bernard. 1997. Genital papillomaviruses (PVs) and epidermodysplasia verruciformis PVs occur in the same monkey species: implications for PV evolution. Virology 228:213-217.
8. deVilliers, E. M. 1994. Human pathogenic papillomavirus types: an update. Curr. Top. Microbrol. Immunol. 186:1-12.
9. Felsenstein, J. 1982. Numerical methods for inferring evolutionary trees. O. Rev. Biol. 57:379-404.
10. Genetics Computer Group. 1994. Program manual for the Wisconsin package, version 8, September 1994. Genetics Computer Group, University of Wisconsin, Madison.
11. Hafner, M. S., and S. A. Nadler. 1988. Phylogenetic trees support the coevolution of parasites and hosts. Nature (London) 332:258-259.
12. Heinzel, P. A., S.-Y. Chan, L. Ho, M. O'Connor, P. Balaram, M. S. Campo, K. Fujinaga, N. Kiviat, J. Kuypers, H. Pfister, B. M. Steinberg, S.-K. Tay, L. L. Villa, and H.-U. Bernard. 1995. Variation of human papillomavirus type 6 (HPV-6) and HPV-11 genomes sampled throughout the world. J. Clin. Microbiol. 33:1746-1754.
13. Ho, L., S.-Y. Chan, R. D. Burk, B. C. Das, K. Fujinaga, J. P. Icenogle, T. Kahn, N. Kiviat, W. Lancaster, P. Mavromara-Nazos, V. Labropoulou, S. Mitrani-Rosenbaum, B. Norrild, M. R. Pillai, J. Stoerker, K. Syrjaenen, S. Syrjaenen, S.-K. Tay, L. L. Villa, C. M. Wheeler, A.-L. Williamson, and H.-U. Bernard. 1993. The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations. J. Virol. 67:6413-6423.
14. Ho, L., S.-Y. Chan, V. Chow, T. Chong, S.-K. Tay, L. L. Villa, and H.-U. Bernard. 1991. Sequence variants of human papillomavirus type 16 in clinical samples permit verification and extension of epidemiological studies and construction of a phylogenetic tree. J. Clin. Microbiol. 29:1765-1772.
15. Institute of Laboratory Animal Resources, Commission on Life Sciences, National Research Council. 1996. Guide for the care and use of laboratory animals. National Academy Press, Washington, D.C.
16. Janzen, D. H. 1980. When is it coevolution? Evolution 34:611-612.
17. Kawase, M., G. Orth, S. Jablonska, C. Blanchet-Bardon, L A. Rueda, and M. Favre. 1996. Variability and phylogeny of the L1 capsid protein gene of human papillomavirus type 5: contribution of clusters of nonsynonymous mutations and of a 30-nucleotide duplication. Virology 221:189-198.
18. Kloster, B. E., D. A. Manias, R. S. Ostrow, M. K. Shaver, S. W. McPherson, S. R. S. Rangen, H. Uno, and A. J. Faras. 1988. Molecular cloning and characterization of the DNA of two papillomaviruses from monkeys. Virology 166:30-40.
19. Longuet, M., P. Cassonet, and G. Orth. 1996. A novel genital human papillomavirus (HPV), HPV type 74, found in immunosuppressed patients. J. Clin. Microbiol. 34:1859-1862.
20. Lorincz, A., R. Reid, A. B. Jenson, M. D. Greenberg, W. Lancaster, and R. J. Kurman. 1992. Human papillomavirus infection of the cervix: relative risk association of 15 common anogenital types. Obstet. Gynecol. 79:328-337.
21. Manos, M. M., Y. Ting, D. K. Wright, A. J. Lewis, T. R. Broker, and S. M. Wolinsky. 1989. The use of polymerase chain reaction amplification for the detection of genital human papillomaviruses. Cancer Cells 7:209-214.
22. Moreno-Lopez, J., H. Ahola, A. Eriksson, P. Bergman, and U. Pettersson. 1987. Reindeer papillomavirus transforming properties correlate with a highly conserved E5 region. J. Virol. 61:3394-3400.
23. Moreno-Lopez, J., H. Ahola, A. Stenlund, A. Osterhaus, and U. Pettersson. 1984. Genome of an avian papillomavirus. J. Virol. 51:872-875.
24. Myers, G., H. U. Bernard, H. Delius, M. Favre, J. Icenogle, M. van Ranst, and C. Wheeler (ed.). 1994. Human papillomaviruses 1994. A compilation and analysis of nucleic acids and amino acid sequences. Los Alamos National Laboratory, Los Alamos, N.Mex.
25. Myers, G., H. U. Bernard, H. Delius, C. Baker, J. Icenogle, A. Halpern, and C. Wheeler (ed.). 1995. Human papillomaviruses 1995. A compilation and analysis of nucleic acids and amino acid sequences. Los Alamos National Laboratory, Los Alamos, N.Mex.
26. O'Banion, M., J. Sundberg, A. Shima, and M. Reichmann. 1987. Venereal papilloma and papillomavirus in a colobus monkey (Colobus guereza). Intervirology 28:232-237.
27. Ong, C.-K., S.-Y. Chan, M. S. Campo, K. Fujinaga, P. Mavromara-Nazos, V. Labropoulou, H. Pfister, S. K. Tay, J. ter Meulen, L. L. Villa, and H.-U. Bernard. Evolution of human papillomavirus type 18: an ancient phylogenetic root in Africa and intratype diversity reflect coevolution with human ethnic groups. J. Virol. 67:6424-6431.
28. Ostrow, R. S., S. M. Coughlin, R. C. McGlennen, A. N. Johnson, M. S. Ratterree, J. Scheffler, N. Yaegashi, D. A. Galloway, and A. J. Faras. 1995. Serological and molecular evidence of rhesus papillomavirus type 1 infections in tissues from geographically distinct institutions. J. Gen. Virol. 76: 293-299.
29. Ostrow, R. S., R. McGlennen, M. Shaver, B. Kloster, D. Houser, and A. J. Faras. 1990. A rhesus monkey model for sexual transmission of a PV isolated from a squamous cell carcinoma. Proc. Natl. Acad. Sci. USA 87:8170-8174.
30. Ostrow, R. S. Unpublished observation.
31. Otten, N., C. von Tscharner, S. Lazary, D. F. Antczak, and H. Gerber. 1993. DNA of bovine papillomavirus type 1 and 2 in equine sarcoids: PCR detection and direct sequencing. Arch. Virol. 132:121-131.
32. Pfister, H., B. Fink, and C. Thomas. 1981. Extrachromosomal bovine papillomavirus type 1 DNA in hamster fibromas and fibrosarcomas. Virology 115:414-118.
33. Reszka, A. A., J. P. Sundberg, and M. E. Reichmann. 1991. In vitro transformation and molecular characterization of colobus monkey venereal papillomavirus DNA. Virology 181:787-792.
34. Ridley, M. 1993. Evolution. Blackwell Scientific, Cambridge, Mass.
35. Shadan, F. F., and L. P. Villareal. 1993. Coevolution of persistently infecting small DNA viruses and their hosts linked to host-interactive regulatory domains. Proc. Natl. Acad. Sci. USA 90:4117-4121.
36. Shimmin, L. C., B. H. Chang, and W. H. Li. 1993. Male driven evolution of DNA sequences. Nature 362:745-747.
37. Stewart, A.-C., A. M. Eriksson, M. M. Manos, N. Muñoz, F. X. Bosch, J. Peto, and C. M. Wheeler. 1996. Intratype variation in 12 human papillomavirus types: a worldwide perspective. J. Virol. 70:3127-3136.
38. Ustav, M., and A. Stenlund. 1991. Transient replication of BPV-1 requires two viral polypeptides encoded by the E1 and E2 open reading frames. EMBO J. 10:449-457.
39. van Ranst, M., R. Tachezy, and R. D. Burk. 1996. Human papillomaviruses: a neverending story? p. 1-19. In C. Lacey (ed.), Papillomavirus reviews: current research on papillomaviruses. Leeds University Press, Leeds, United Kingdom.
40. Wheeler, C. M. 1996. Human papillomavirus type-specific prevalence, part III, p. 112-124. In G. Myers, A. Halpern, C. Baker, A. McBride, C. Wheeler, and J. Doorbar (ed.), Human papillomaviruses 1996. A compilation and analysis of nucleic acids and amino acid sequences. Los Alamos National Laboratory, Los Alamos, N.Mex.
41. Yamada, T., C. M. Wheeler, A. L. Halpern, A.-C. Stewart, A. Hildesheim, and S. A. Jenison. 1995. Human papillomavirus type 16 variant lineages in United States populations characterized by nucleotide sequence analysis of the E6, L2, and L1 coding segments. J. Virol. 69:7743-7753.