Establishment of methylation-sensitive-representational difference analysis and isolation of hypo- and hypermethylated genomic fragments in mouse liver tumors

Proceedings of the National Academy of Sciences of the United States of America

Volumn 94, Issue 6, 1997, Pages 2284-2289

  Ushijima, Toshikazu ^a   Morimura, Keiichirou ^a   Hosoya, Yoko ^a   Okonogi, Hideo ^a   Tatematsu, Masae ^b   Sugimura, Takashi ^a   Nagao, Minako ^a  

^a NATIONAL CANCER CENTER RESEARCH INSTITUTE   (Japan)

^b AICHI CANCER CENTER HOSPITAL   (Japan)

Author keywords

elimination of excessive clones; epigenetic; genomic subtraction; heterocyclic amine

Indexed keywords

2 AMINO 3,4 DIMETHYLIMIDAZO[4,5 F]QUINOLINE; CELL DNA;

ANIMAL TISSUE; ARTICLE; CELL DIFFERENTIATION; CELL PROLIFERATION; CONTROLLED STUDY; DNA METHYLATION; GENE ISOLATION; LIVER CARCINOGENESIS; LIVER TUMOR; MOUSE; NONHUMAN; PRIORITY JOURNAL;

ANIMALS; BASE SEQUENCE; BLOTTING, SOUTHERN; CARCINOGENS; DATABASES, FACTUAL; DNA METHYLATION; DNA PRIMERS; DNA, NEOPLASM; HUMANS; LIVER NEOPLASMS, EXPERIMENTAL; MICE; MICE, INBRED STRAINS; QUINOLINES; SITE-SPECIFIC DNA METHYLTRANSFERASE (CYTOSINE-SPECIFIC); STOMACH NEOPLASMS;

ANIMALIA; MAMMALIA;

EID: 0030909356     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.94.6.2284     Document Type: Article

References (29)

1. Li, E., Bestor, T. H. & Jaenisch, R. (1992) Cell 69, 915-926.
2. Guillaudeux, T., D'Almeida, M., Girr, M., Rodriguez, A. M., Pontarotti, P., Fauchet, R. & Le Bouteiller, P. (1993) Am. J. Reprod. Immunol. 30, 228-238.
3. Kudo, S. & Fukuda, M. (1995) J. Biol. Chem. 270, 13298-13302.
4. Thakur, M. K. & Kaur, J. (1992) Cell. Mol. Biol. 38, 525-532.
5. Li, E., Beard, C. & Jaenisch, R. (1993) Nature (London) 366, 362-365.
6. Kirillov, A., Kistler, B., Mostoslavsky, R., Cedar, H., Wirth, T. & Bergman, Y. (1996) Nat. Genet. 13, 435-441.
7. el-Deiry, W. S., Nelkin, B. D., Celano, P., Yen, R. W., Falco, J. P., Hamilton, S. R. & Baylin, S. B. (1991) Proc. Natl. Acad. Sci. USA 88, 3470-3474.
8. Counts, J. L. & Goodman, J. I. (1994) Mol. Carcinog. 11, 185-188.
9. Counts, J. L. & Goodman, J. I. (1995) Cell 83, 13-15.
10. Goelz, S. E., Vogelstein, B., Hamilton, S. R. & Feinberg, A. P. (1985) Science 228, 187-190.
11. Dante, R., Dante-Paire, J., Rigal, D. & Roizes, G. (1992) Anticancer Res. 12, 559-563.
12. Gonzalez-Zulueta, M., Bender, C. M., Yang, A. S., Nguyen, T., Beart, R. W., Van Tornout, J. M. & Jones, P. A. (1995) Cancer Res. 55, 4531-4535.
13. Herman, J. G., Merlo, A., Mao, L., Lapidus, R. G., Issa, J. P., Davidson, N. E., Sidransky, D. & Baylin, S. B. (1995) Cancer Res. 55, 4525-4530.
14. Herman, J. G., Latif, F., Weng, Y., Lerman, M. I., Zbar, B., Liu, S., Samid, D., Duan, D. S., Gnarra, J. R., Linehan, W. M. & Baylin, S. B. (1994) Proc. Natl. Acad. Sci. USA 91, 9700-9704.
15. Yoshiura, K., Kanai, Y., Ochiai, A., Shimoyama, Y., Sugimura, T. & Hirohashi, S. (1995) Proc. Natl. Acad. Sci. USA 92, 7416-7419.
16. Graff, J. R., Herman, J. G., Lapidus, R. G., Chopra, H., Xu, R., Jarrard, D. F., Isaacs, W. B., Pitha, P. M., Davidson, N. E. & Baylin, S. B. (1995) Cancer Res. 55, 5195-5199.
17. Ottaviano, Y. L., Issa, J. P., Pari, F. F., Smith, H. S., Baylin, S. B. & Davidson, N. E. (1994) Cancer Res. 54, 2552-2555.
18. Ferguson, A. T., Lapidus, R. G., Baylin, S. B. & Davidson, N. E. (1995) Cancer Res. 55, 2279-2283.
19. Makos, M., Nelkin, B. D., Reiter, R. E., Gnarra, J. R., Brooks, J., Isaacs, W., Linehan, M. & Baylin, S. B. (1993) Cancer Res. 53, 2719-2722.
20. Kanai, Y., Ushijima, S., Tsuda, H., Sakamoto, M., Sugimura, T. & Hirohashi, S. (1996) Jpn. J. Cancer Res. 87, 1210-1217.
21. Kawai, J., Hirose, K., Fushiki, S., Hirotsune, S., Ozawa, N., Hara, A., Hayashizaki, Y. & Watanabe, S. (1994) Mol. Cell. Biol. 14, 7421-7427.
22. Lisitsyn, N., Lisitsyn, N. & Wigler, M. (1993) Science 259, 946-951.
23. Toyota, M., Canzian, F., Ushijima, T., Hosoya, Y., Kuramoto, T., Serikawa, T., Imai, K., SUgimura, T. & Nagao, M. (1996) Proc. Natl. Acad. Sci. USA 93, 3914-3919.
24. Ohgaki, H., Hasegawa, H., Suenaga, M., Kato, T., Sato, S., Takayama, S. & Sugimura, T. (1986) Carcinogenesis 7, 1889-1893.
25. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab. Press, Plainview, NY), 2nd Ed., pp. 9.14-9.23.
26. Tahira, T., Ishizaka, Y., Itoh, F., Sugimura, T. & Nagao, M. (1990) Oncogene 5, 97-102.
27. Warburg, O. H. (1926) Ueber den Stoffwechsel der Tumoren (Springer, Berlin).
28. Kochanek, S., Renz, D. & Doerfler, W. (1993) EMBO J. 12, 1141-1151.
29. Sugimura, T. (1970) in Chemical Tumor Problems, ed. Nakahara, W. (Japanese Society for the Promotion of Science, Tokyo), pp. 269-284.