메뉴 건너뛰기




Volumn 7, Issue 3, 1997, Pages 198-209

Genome DNA sequencing around the EF-1α multigene locus of Arabidopsis thaliana indicates a high gene density and a shuffling of noncoding regions

Author keywords

[No Author keywords available]

Indexed keywords

VEGETABLE PROTEIN;

EID: 0030895296     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.7.3.198     Document Type: Article
Times cited : (16)

References (56)
  • 1
    • 0027261431 scopus 로고
    • Comparative linkage maps of the rice and maize genomes
    • Ahn, S. and S. Tanksley. 1993. Comparative linkage maps of the rice and maize genomes. Proc. Natl. Acad. Sci. 90: 7980-7984.
    • (1993) Proc. Natl. Acad. Sci. , vol.90 , pp. 7980-7984
    • Ahn, S.1    Tanksley, S.2
  • 3
    • 0024745067 scopus 로고
    • The family encoding the A. thaliana translation elongation factor EF-1α: Molecular cloning, characterization and expression
    • Axelos, M., C. Bardet, T. Liboz, A. Le Van Thai, C. Curie, and B. Lescure. 1989. The family encoding the A. thaliana translation elongation factor EF-1α: Molecular cloning, characterization and expression. Mol. Gen. Genet. 219: 106-112.
    • (1989) Mol. Gen. Genet. , vol.219 , pp. 106-112
    • Axelos, M.1    Bardet, C.2    Liboz, T.3    Le Van Thai, A.4    Curie, C.5    Lescure, B.6
  • 4
    • 0027249595 scopus 로고
    • dbEST - Database for "expressed sequences tags"
    • Boguski, M.S., T.M.J. Lowe, and S.H. Toltoshev. 1993. dbEST - database for "expressed sequences tags". Nature Genet. 4: 332-333.
    • (1993) Nature Genet. , vol.4 , pp. 332-333
    • Boguski, M.S.1    Lowe, T.M.J.2    Toltoshev, S.H.3
  • 6
    • 0029137772 scopus 로고
    • Light regulated expression of the A. thaliana ferredoxin gene requires sequences upstream and downstream of the transcription initiation site
    • Bovy, A., C. Van Den Berg, G. de Vrieze, W.F. Thompson, P. Weisbeek, and S. Smeekens. 1995. Light regulated expression of the A. thaliana ferredoxin gene requires sequences upstream and downstream of the transcription initiation site. Plant. Mol. Biol. 27: 27-39.
    • (1995) Plant. Mol. Biol. , vol.27 , pp. 27-39
    • Bovy, A.1    Van Den Berg, C.2    De Vrieze, G.3    Thompson, W.F.4    Weisbeek, P.5    Smeekens, S.6
  • 7
    • 0028053180 scopus 로고
    • Mobile inverted repeat elements of the tourist family are associated with the genes of many cereal grasses
    • Bureau, T. and S. Wessler. 1994a. Mobile inverted repeat elements of the tourist family are associated with the genes of many cereal grasses. Proc. Natl. Acad. Sci. 91: 1411-1415.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 1411-1415
    • Bureau, T.1    Wessler, S.2
  • 8
    • 0028450046 scopus 로고
    • Stowaway: A new family of inverted repeat elements associated with the genes of both Monocotyledonous and Dicotyledonous plants
    • _. 1994b. Stowaway: A new family of inverted repeat elements associated with the genes of both Monocotyledonous and Dicotyledonous plants. Plant Cell 6: 907-916.
    • (1994) Plant Cell , vol.6 , pp. 907-916
  • 11
    • 0025978273 scopus 로고
    • cis and trans acting elements involved in the activation of A. thaliana A1 gene encoding the translation elongation factor EF-1α
    • Curie, C., T. Liboz, C. Bardet, E. Gander, C. Medale, M. Axelos, and B. Lescure. 1991. cis and trans acting elements involved in the activation of A. thaliana A1 gene encoding the translation elongation factor EF-1α. Nucleic Acids Res. 196: 1305-1310.
    • (1991) Nucleic Acids Res. , vol.196 , pp. 1305-1310
    • Curie, C.1    Liboz, T.2    Bardet, C.3    Gander, E.4    Medale, C.5    Axelos, M.6    Lescure, B.7
  • 12
    • 0027335693 scopus 로고
    • Modular organization and developmental activity of an A. thaliana EF-1α gene promoter
    • Curie, C., M. Axelos, C. Bardet, N. Atanassova, N. Chaubet, and B. Lescure. 1993. Modular organization and developmental activity of an A. thaliana EF-1α gene promoter. Mol. Gen. Genet. 238: 428-436.
    • (1993) Mol. Gen. Genet. , vol.238 , pp. 428-436
    • Curie, C.1    Axelos, M.2    Bardet, C.3    Atanassova, N.4    Chaubet, N.5    Lescure, B.6
  • 13
    • 0026523624 scopus 로고
    • Plant and mammalian sorting signals for protein retention in the endoplasmic reticulum contain a conserved epitope
    • Denecke, J., R. DeRycke, and J. Botterman. 1992. Plant and mammalian sorting signals for protein retention in the endoplasmic reticulum contain a conserved epitope. EMBO J. 11: 2345-2355.
    • (1992) EMBO J. , vol.11 , pp. 2345-2355
    • Denecke, J.1    Derycke, R.2    Botterman, J.3
  • 17
    • 0025016822 scopus 로고
    • Systematic screening of yeast artificial chromosome libraries by use of the polymerase chain reaction
    • Green, E.D. and M.V. Olson. 1990. Systematic screening of yeast artificial chromosome libraries by use of the polymerase chain reaction. Proc. Natl. Acad. Sci. 87: 1213-1217.
    • (1990) Proc. Natl. Acad. Sci. , vol.87 , pp. 1213-1217
    • Green, E.D.1    Olson, M.V.2
  • 18
    • 0025765676 scopus 로고
    • Construction and characterization of a yeast artificial chromosome library of A. which is suitable for chromosome walking
    • Grill, E. and C. Somerville. 1991. Construction and characterization of a yeast artificial chromosome library of A. which is suitable for chromosome walking. Mol. & Gen. Genet. 226: 484-490
    • (1991) Mol. & Gen. Genet. , vol.226 , pp. 484-490
    • Grill, E.1    Somerville, C.2
  • 19
    • 0029933538 scopus 로고    scopus 로고
    • Characterization of an A. thaliana gene that defines a new class of putative plant receptor kinases with an extracellular lectin like domain
    • Hervé, C., P. Dabos, J.P. Galaud, P. Rougé, and B. Lescure. 1996. Characterization of an A. thaliana gene that defines a new class of putative plant receptor kinases with an extracellular lectin like domain. J. Mol. Biol. 2855: 778-788.
    • (1996) J. Mol. Biol. , vol.2855 , pp. 778-788
    • Hervé, C.1    Dabos, P.2    Galaud, J.P.3    Rougé, P.4    Lescure, B.5
  • 21
    • 2042476756 scopus 로고
    • Hydrogen donor system for Escherichia coli ribonucleoside diphosphate reductase dependent upon glutathione
    • Homlgren, A. 1976. Hydrogen donor system for Escherichia coli ribonucleoside diphosphate reductase dependent upon glutathione. Proc. Natl. Acad. Sci. 73: 2275-2279.
    • (1976) Proc. Natl. Acad. Sci. , vol.73 , pp. 2275-2279
    • Homlgren, A.1
  • 22
    • 0019846015 scopus 로고
    • Dual function transcripts specifying tRNA and mRNA
    • Hudson, L., J. Rossi, and A. Landy. 1981. Dual function transcripts specifying tRNA and mRNA. Nature 294: 422-427.
    • (1981) Nature , vol.294 , pp. 422-427
    • Hudson, L.1    Rossi, J.2    Landy, A.3
  • 23
    • 0028171190 scopus 로고
    • Characterization of a cDNA encoding a novel DNA binding protein SPF1, that recognizes SP8 sequences in the 5′ upstream regions of genes coding for sporamin and β amylase from sweet potato
    • Ishiguro, S. and K. Nakamura. 1994. Characterization of a cDNA encoding a novel DNA binding protein SPF1, that recognizes SP8 sequences in the 5′ upstream regions of genes coding for sporamin and β amylase from sweet potato. Mol. & Gen. Genet. 244: 563-571.
    • (1994) Mol. & Gen. Genet. , vol.244 , pp. 563-571
    • Ishiguro, S.1    Nakamura, K.2
  • 24
    • 0016817277 scopus 로고
    • Identification of two copies of the gene for the elongation factor EF-Tu in E. coli
    • Jaskunas, S.R., L. Lindahl, M. Nomura, and R.R. Burgess. 1975. Identification of two copies of the gene for the elongation factor EF-Tu in E. coli. Nature 257: 458-462.
    • (1975) Nature , vol.257 , pp. 458-462
    • Jaskunas, S.R.1    Lindahl, L.2    Nomura, M.3    Burgess, R.R.4
  • 25
    • 0029360431 scopus 로고
    • Alternative splicing results in two different transcripts for H-protein of the glycine cleavage system in the C4 species Flaveria trinervia
    • Kopriva, S., R. Cossu, and H. Bauwe. 1995. Alternative splicing results in two different transcripts for H-protein of the glycine cleavage system in the C4 species Flaveria trinervia. Plant J. 8: 435-441.
    • (1995) Plant J. , vol.8 , pp. 435-441
    • Kopriva, S.1    Cossu, R.2    Bauwe, H.3
  • 26
    • 0027473027 scopus 로고
    • Genomic DNA structure of a gene encoding cytosolic ascorbate peroxidase from A. thaliana
    • Kubo, A., H. Saji, K. Tanaka, and N. Kondo. 1993. Genomic DNA structure of a gene encoding cytosolic ascorbate peroxidase from A. thaliana. FEBS Lett. 315: 313-317.
    • (1993) FEBS Lett. , vol.315 , pp. 313-317
    • Kubo, A.1    Saji, H.2    Tanaka, K.3    Kondo, N.4
  • 27
    • 0026856893 scopus 로고
    • Transcriptional and post transcriptional regulation of gene expression in plants
    • Kuhlemeier, C. 1992. Transcriptional and post transcriptional regulation of gene expression in plants. Plant Mol. Biol. 19: 1-14.
    • (1992) Plant Mol. Biol. , vol.19 , pp. 1-14
    • Kuhlemeier, C.1
  • 29
    • 0025605095 scopus 로고
    • Rapid identification of yeast artificial chromosome clones by matrix pooling and crude lysate PCR
    • Kwiatkowski, T.J., H.Y. Zoghbi, S.A. Ledbetter, K.A. Ellison, and A.C. Chinault. 1990. Rapid identification of yeast artificial chromosome clones by matrix pooling and crude lysate PCR. Nucleic Acids Res. 1823: 7191-7192.
    • (1990) Nucleic Acids Res. , vol.1823 , pp. 7191-7192
    • Kwiatkowski, T.J.1    Zoghbi, H.Y.2    Ledbetter, S.A.3    Ellison, K.A.4    Chinault, A.C.5
  • 30
    • 0030045268 scopus 로고    scopus 로고
    • Comparative mapping in A. and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time
    • Lagercrantz, U., J. Putterill, G. Coupland, and D. Lydiate. 1996. Comparative mapping in A. and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time. Plant J. 9: 13-20.
    • (1996) Plant J. , vol.9 , pp. 13-20
    • Lagercrantz, U.1    Putterill, J.2    Coupland, G.3    Lydiate, D.4
  • 31
    • 0027319754 scopus 로고
    • The second largest subunit of RNA polymerase II from A. thaliana
    • Larkin, R. and T. Guifoyle. 1993. The second largest subunit of RNA polymerase II from A. thaliana. Nucleic Acids Res. 21: 1038.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 1038
    • Larkin, R.1    Guifoyle, T.2
  • 32
    • 0029278781 scopus 로고
    • A. phosphoribosylanthranilate isomerase: Molecular genetic analysis of triplicate tryptophan pathway genes
    • Li, J., J. Zhao, A. Rose, R. Schmidt, and R. Last. 1995. A. phosphoribosylanthranilate isomerase: Molecular genetic analysis of triplicate tryptophan pathway genes. Plant Cell 7: 447-461.
    • (1995) Plant Cell , vol.7 , pp. 447-461
    • Li, J.1    Zhao, J.2    Rose, A.3    Schmidt, R.4    Last, R.5
  • 33
    • 0025242892 scopus 로고
    • The four members of the gene family encoding the A. thaliana translation elongation factor EF-1α are actively transcribed
    • Liboz, T., C. Bardet, A. Le Van Thai, M. Axelos, and B. Lescure. 1989. The four members of the gene family encoding the A. thaliana translation elongation factor EF-1α are actively transcribed. Plant Mol. Biol. 14: 107-110.
    • (1989) Plant Mol. Biol. , vol.14 , pp. 107-110
    • Liboz, T.1    Bardet, C.2    Le Van Thai, A.3    Axelos, M.4    Lescure, B.5
  • 34
    • 0026100266 scopus 로고
    • Intron enhancement of gene expression and the splicing efficiency of intons in maize cells
    • Luehrsen, K.R. and V. Walbot. 1991. Intron enhancement of gene expression and the splicing efficiency of intons in maize cells. Mol. & Gen. Genet. 225: 81-93.
    • (1991) Mol. & Gen. Genet. , vol.225 , pp. 81-93
    • Luehrsen, K.R.1    Walbot, V.2
  • 36
    • 0028901726 scopus 로고
    • Glutaredoxin accelerates gluthathione dependent folding of reduced ribonuclease A together with protein disulfide isomerase
    • Lundstrom-Ljung, J. and A. Holmgren. 1995. Glutaredoxin accelerates gluthathione dependent folding of reduced ribonuclease A together with protein disulfide isomerase. J. Biol. Chem. 270: 7822-7828.
    • (1995) J. Biol. Chem. , vol.270 , pp. 7822-7828
    • Lundstrom-Ljung, J.1    Holmgren, A.2
  • 37
    • 0000005872 scopus 로고
    • Duplicate sequences with a similarity to expressed genes in the genome of A. thaliana
    • McGrath, J., M. Jansco, and E. Pichersky. 1993. Duplicate sequences with a similarity to expressed genes in the genome of A. thaliana. Theor. Appl. Genet. 86: 880-888.
    • (1993) Theor. Appl. Genet. , vol.86 , pp. 880-888
    • McGrath, J.1    Jansco, M.2    Pichersky, E.3
  • 38
  • 39
    • 0001988804 scopus 로고
    • Structure and organization of the nuclear A. thaliana nuclear genome
    • (eds. E.M. Meyerowitz and C.R. Somerville) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Meyerowitz, E.M. 1994. Structure and organization of the nuclear A. thaliana nuclear genome. In Arabidopsis, pp. 21-36. (eds. E.M. Meyerowitz and C.R. Somerville) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1994) Arabidopsis , pp. 21-36
    • Meyerowitz, E.M.1
  • 40
    • 0029037187 scopus 로고
    • ZEMa, a member of a novel group of MADS box genes, is alternatively spliced in maize endosperm
    • Montag, K., F. Salamini, and R.D. Thompson. 1995. ZEMa, a member of a novel group of MADS box genes, is alternatively spliced in maize endosperm. Nucleic Acids Res. 23: 2168-2177.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 2168-2177
    • Montag, K.1    Salamini, F.2    Thompson, R.D.3
  • 41
    • 14744292062 scopus 로고
    • Molecular analysis of small grain nuclear genomes - Current status and prospects
    • Moore, G., M. Gale, N. Kurata, and R. Flavell. 1993. Molecular analysis of small grain nuclear genomes - Current status and prospects. Bio/Technology 11: 584-589.
    • (1993) Bio/Technology , vol.11 , pp. 584-589
    • Moore, G.1    Gale, M.2    Kurata, N.3    Flavell, R.4
  • 43
    • 0029021906 scopus 로고
    • Identification and characterization of putative transposable DNA elements in solanaceous plants and Caenorhabditis elegans
    • Oosumi, T., B. Garlick, and W. Belknap. 1995. Identification and characterization of putative transposable DNA elements in solanaceous plants and Caenorhabditis elegans. Proc. Natl. Acad. Sci. 92: 8886-8890.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 8886-8890
    • Oosumi, T.1    Garlick, B.2    Belknap, W.3
  • 44
    • 0025084936 scopus 로고
    • Enhancer sequences from A. thaliana obtained by library transformation of Nicotiana tabacum
    • Ott, R. and N. Chua. 1990. Enhancer sequences from A. thaliana obtained by library transformation of Nicotiana tabacum. Mol. Gen. Genet. 223: 169-179.
    • (1990) Mol. Gen. Genet. , vol.223 , pp. 169-179
    • Ott, R.1    Chua, N.2
  • 45
    • 0026148460 scopus 로고
    • Exons - Original building blocks of proteins?
    • Patthy, L. 1991. Exons - Original building blocks of proteins? BioEssays 13: 187-192.
    • (1991) BioEssays , vol.13 , pp. 187-192
    • Patthy, L.1
  • 46
    • 0023989064 scopus 로고
    • Improved tools for bilogical sequence comparison
    • Pearson, W.R. and D.J. Lipman. 1988. Improved tools for bilogical sequence comparison. Proc. Natl. Acad. Sci. 85: 2444-2448.
    • (1988) Proc. Natl. Acad. Sci. , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 47
    • 0029360720 scopus 로고
    • Seeing double: Appreciating genetic redundancy
    • Pickett, F.B. and D.R. Meeks-Wagner. 1995. Seeing double: Appreciating genetic redundancy. Plant Cell 7: 1347-1356.
    • (1995) Plant Cell , vol.7 , pp. 1347-1356
    • Pickett, F.B.1    Meeks-Wagner, D.R.2
  • 48
    • 0027674297 scopus 로고
    • cDNA cloning and characterization of novel ripening related mRNAs with altered patterns of accumulation in the ripening inhibitor rin tomato ripening mutant
    • Picton, S., J. Gray, S. Barton, U. Abubakar, A. Lowe, and D. Grierson. 1993. cDNA cloning and characterization of novel ripening related mRNAs with altered patterns of accumulation in the ripening inhibitor rin tomato ripening mutant. Plant. Mol. Biol. 23: 193-207.
    • (1993) Plant. Mol. Biol. , vol.23 , pp. 193-207
    • Picton, S.1    Gray, J.2    Barton, S.3    Abubakar, U.4    Lowe, A.5    Grierson, D.6
  • 49
    • 0027389461 scopus 로고
    • DNA cloning and expression of an A. GTP binding protein of the ARF family
    • Regad, F., C. Bardet, D. Tremousaygue, A. Moisan, B. Lescure, and M. Axelos. 1993. cDNA cloning and expression of an A. GTP binding protein of the ARF family. FEBS Lett. 316: 133-136.
    • (1993) FEBS Lett. , vol.316 , pp. 133-136
    • Regad, F.1    Bardet, C.2    Tremousaygue, D.3    Moisan, A.4    Lescure, B.5    Axelos, M.6
  • 50
    • 0028822845 scopus 로고
    • The tef1 box, a ubiquitous cis-acting element involved in the activation of plant genes that are highly expressed in cycling cells
    • Regad, F., C. Hervé, O. Marinx, C. Bergounioux, D. Tremousaygue, and B. Lescure. 1995. The tef1 box, a ubiquitous cis-acting element involved in the activation of plant genes that are highly expressed in cycling cells. Mol. & Gen. Genet. 248: 703-711.
    • (1995) Mol. & Gen. Genet. , vol.248 , pp. 703-711
    • Regad, F.1    Hervé, C.2    Marinx, O.3    Bergounioux, C.4    Tremousaygue, D.5    Lescure, B.6
  • 52
    • 0025840492 scopus 로고
    • Molecular cloning of a putative endomembrane protein resembling vertebrate protein disulfide isomerase and a phosphatidylinositol specific phospholipase C
    • Shorrosh, B.S. and R.A. Dixon. 1991. Molecular cloning of a putative endomembrane protein resembling vertebrate protein disulfide isomerase and a phosphatidylinositol specific phospholipase C. Proc. Natl. Acad. Sci. 88: 10941-10945.
    • (1991) Proc. Natl. Acad. Sci. , vol.88 , pp. 10941-10945
    • Shorrosh, B.S.1    Dixon, R.A.2
  • 53
    • 0028356059 scopus 로고
    • Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes
    • Sofia, H.J., V. Burland, D.L. Daniels, G. Plunket III, and F.R. Blattner. 1994. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Nucleic Acids Res. 22: 2576-2586.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 2576-2586
    • Sofia, H.J.1    Burland, V.2    Daniels, D.L.3    Plunket III, G.4    Blattner, F.R.5
  • 54
    • 0005744852 scopus 로고    scopus 로고
    • The physical map of an A. chromosome
    • Sommerville, C. 1996. The physical map of an A. chromosome. Trends Plant Sci. 1: 2.
    • (1996) Trends Plant Sci. , vol.1 , pp. 2
    • Sommerville, C.1
  • 55
    • 0002219662 scopus 로고    scopus 로고
    • Sources and consequences of phenotypic and genotypic plasticity in flowering plants
    • Walbot,V. 1996. Sources and consequences of phenotypic and genotypic plasticity in flowering plants. Trends in Plant Sci. 1: 27-32.
    • (1996) Trends in Plant Sci. , vol.1 , pp. 27-32
    • Walbot, V.1
  • 56
    • 0028053733 scopus 로고
    • Retrotransposons in the flanking regions of normal plant genes: A role for copia like elements in the evolution of gene structure and expression
    • White, S., L. Habera, and S. Wessler. 1994. Retrotransposons in the flanking regions of normal plant genes: A role for copia like elements in the evolution of gene structure and expression. Proc. Natl. Acad. Sci. 91: 11792-11796.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 11792-11796
    • White, S.1    Habera, L.2    Wessler, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.