Assessment of genetic variability among strains of rainbow and cutthroat trout using multilocus DNA fingerprints

Aquaculture

Volumn 149, Issue 1-2, 1997, Pages 47-56

  Palti, Yniv ^a   Parsons, James E ^b   Thorgaard, Gary H ^a  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b Blue Lakes Trout Farm   (United States)

Author keywords

Genetics; Multilocus DNA fingerprints; Oncorhynchus clarki; Oncorhynchus mykiss; RFLP; Trout

Indexed keywords

EID: 0030894581     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0044-8486(96)01428-7     Document Type: Article

References (32)

1. Allendorf, F.W. and Utter, F.M., 1979. Population genetics. In: W.S. Hoar, D.J. Randall and J.R. Brett (Editors), Fish Physiology, VIII. Academic Press, New York/San Francisco/London, pp. 407-454.
2. Allendorf, F.W. and Phelps, S.R., 1980. Loss of genetic variation in a hatchery stock of cutthroat trout. Trans. Am. Fish. Soc., 109: 537-543.
3. Allendorf, F.W. and Leary, R.F., 1988. Conservation and distribution of genetic variation in a polytypic species, the cutthroat trout. Cons. Biol., 2(2): 170-184.
4. Bentzen, P., Harris, A.S. and Wright, J.M., 1991. Cloning of hypervariable minisatellite and simple sequence microsatellite repeats for DNA fingerprinting of important aquacultural species of salmonids and tilapia. In: T. Burke, G. Dolf, A.J. Jeffereys and R. Wolff (Editors), DNA Fingerprinting: Approaches and Applications. Berkhauser Verlag, Boston, pp. 243-262.
5. Dunnington, E.A., Gal, O., Plotzky, Y., Haberfeld, A., Kirk, T., Goldberg, A., Lavi, U., Cahaner, A., Seigel, P.B. and Hillel, J., 1990. DNA fingerprints of chickens selected for high and low body weight for 31 generations. Anim. Genet., 21: 247-257.
6. Fields, R.D., Johnson, K.R. and Thorgaard, G.H., 1989. DNA fingerprints in rainbow trout detected by hybridization with DNA of bacteriophage M13. Trans. Amer. Fish. Soc., 118: 78-81.
7. Gall, G.A.E., 1987. Inbreeding. In: N. Ryman and F. Utter (Editors), Population Genetics and Fishery Management. University of Washington Press, Seattle/London, pp. 47-88.
8. Gastier, J.M., Pulido, J.C., Sunden, S., Brody, T., Buetow, K.H., Murray, J.C., Webber, J.L., Hudson, T.J., Shefield, V.C. and Duyk, G.M., 1995. Survey of trinucleotide repeats in the human genome: assessment of their utility as genetic markers. Hum. Mol. Genet., 4: 1829-1836.
9. Guyomard, R., 1993. Methods to describe fish stocks. In: J.G. Cloud and G.H. Thorgaard (Editors), Genetic Conservation of Salmonid Fishes. NATO ASI Series A: Life Sciences. Plenum, New York, pp. 1-22.
10. Heath, D.D., Iwama, G.K. and Devlin, R.H., 1994. DNA fingerprinting used to test for family effects on precocious sexual maturation in two populations of Oncorhynchus tshawytcha (Chinook salmon). Heredity, 73: 616-624.
11. Heath, D.D., Devlin, R.H., Hilbish, T.J. and Iwama, G.K., 1995a. Multilocus DNA fingerprints in seven species of salmonids. Can. J. Zool. 73: 600-606.
12. Heath, D.D., Bernier, N.J. and Mousseau, T.A., 1995b. A single-locus minisatellite discriminates chinook salmon (Oncorhynchus tshawytscha) populations. Mol. Ecol., 4: 389-393.
13. Hendricks, J.D., 1982. Chemical carcinogenesis in fish. In: L.J. Weber (Editor), Aquatic Toxicology. Raven Press, New York, pp. 149-211.
14. Hillel, J. 1992. Application of multilocus DNA markers in poultry breeding and genetic analysis. Proceedings of the 41st Annual Poultry Breeders Roundtable. 7-8, May 1992, St. Louis, MO.
15. Jeffreys, A.J., Wilson, V. and Thein, S.L., 1985. Hypervariable "minisatellite" regions in human DNA. Nature, 314: 67-73.
16. Leary, R.B., Allendrof, F.W., Phelps, S.R. and Knudsen, K.L., 1987. Genetic divergence and identification of seven cutthroat trout subspecies and rainbow trout. Trans. Amer. Fish. Soc., 116: 580-587.
17. Lloyd, M.A., Fields M.J. and Thorgaard, G.H., 1989. BKm minisatellite sequences are not sex associated but reveal DNA fingerprint polymorphisms in rainbow trout. Genome, 32: 865-868.
18. Loudenslager, E.J. and Thorgaard, G.H., 1979. Karyotypic and evolutionary relationships of the Yellowstone (Salmo clarki bouvieri) and west-slope (S.c. lewisi) cutthroat trout. J. Fish. Res. Board Can., 36: 630-635
19. McConnell, S.K., O'Reilly, P., Hamilton, L., Wright, J.M. and Bentzen, P., 1995a. Polymorphic microsatellite loci from Atlantic salmon (Salmo salar): genetic differentiation of north American and European populations. Can. J. Fish. Aquat. Sci., 52: 1863-1872.
20. McConnell, S.K., Hamilton, L., Morris, D., Cook, D., Paquet, D., Bentzen, P. and Wright, J., 1995b. Isolation of salmonid microsatellite loci and their application to the population genetics of Canadian east coast stocks Atlantic salmon. Aquaculture, 137: 19-30.
21. Morris, D.B., Richard K.R. and Wright, J.M., 1996. Microsatellite from rainbow trout (Oncorhynchus mykiss) and their use for genetic study of salmonids. Can. J. Fish. Aquat. Sci., 53: 120-126.
22. Plotsky, Y., Cahaner, A., Haberfeld, A., Lavi, U., Lamont, S.J. and Hillel, J., 1993. DNA fingerprint bands applied to linkage analysis with quantitative trait loci in chickens. Anim. Genet., 24: 105-110.
23. Prodohl, P.A., Taggart, J.B. and Ferguson, A., 1992. Genetic variability within and among sympatric brown trout (Salmo trutta) populations: multi-locus DNA fingerprint analysis. Hereditas, 117: 45-50.
24. Redman, T. and Jacobs, T., 1991. Electrophoresis gel image analysis software for the molecular biology laboratory. BioTechniques, 10: 790-794.
25. Sambrook, J., Fritsch, E.F. and Maniatis, T., 1989. Molecular Cloning: A Laboratory Manual. 2nd edition, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
26. Shin, H.-S., Bargiello, T.A., Clark, B.T., Jackson, F.R. and Young, M.W., 1985. An unusual coding sequence from a Drosophila clock gene is conserved in vertebrates. Nature (London), 317: 445-448.
27. Spruell, P., Cummings, S.A., Kim, Y. and Thorgaard, G.H., 1994. Comparison of three anadromous rainbow trout populations using DNA fingerprinting and mixed DNA samples. Can. J. Fish. Aquat. Sci., 51(Suppl. 1): 252-257.
28. Taggart, J.B. and Ferguson, F., 1990. Hypervariable minisatellite DNA single locus probes for the Atlantic salmon, Salmo salar. J. Fish. Biol., 37: 991-993.
29. Taylor, E.B., 1995. Genetic variation at minisatellite DNA loci among north Pacific populations of steelhead and rainbow trout (Oncorhynchus mykiss). J. Hered., 86: 354-363.
30. Thorgaard, G.H., Spruell, P., Cummings, S.A., Peek, A.S. and Brannon, E.L., 1995. Mixed DNA fingerprint analysis differentiates Sockeye salmon populations. Amer. Fish. Soc. Symp., 17: 295-303.
31. Utter, F., Aebersold, P. and Winans, G., 1987. Interpreting genetic variation detected by electrophoresis. In: N. Ryman and F. Utter (Editors), Population Genetics and Fishery Management. University of Washington Press, Seattle/London, pp. 21-46.
32. Wetton, J.H., Carter, R.E., Parkin, D.T. and Walters, D., 1987. Demographic study of wild house sparrow population by DNA fingerprinting. Nature (London), 327: 147-149.