The proteins encoded by rice grassy stunt virus RNA5 and RNA6 are only distantly related to the corresponding proteins of other members of the genus Tenuivirus

Journal of General Virology

Volumn 78, Issue 9, 1997, Pages 2355-2363

  Toriyama, Shigemitsu ^a   Kimishima, Takao ^b   Takahashi, Mami ^a  

^a NATIONAL INSTITUTE FOR AGRO ENVIRONMENTAL SCIENCES   (Japan)

^b IBARAKI UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE; VIRUS PROTEIN; VIRUS RNA;

AMINO ACID SEQUENCE; ARTICLE; CODING; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PLANT VIRUS; PRIORITY JOURNAL; PROTEIN ANALYSIS; RICE; RNA ANALYSIS; RNA SEQUENCE; TAXONOMY;

RICE GRASSY STUNT VIRUS; TENUIVIRUS;

EID: 0030886207     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-78-9-2355     Document Type: Article

References (34)

1. de Miranda, J., Hernandez, M., Hull, R. & Espinoza, A. M. (1994). Sequence analysis of rice hoja blanca virus RNA3. Journal of General Virology 75, 2127-2132.
2. Falk, B. W. & Tsai, J. H. (1984). Identification of single-and double-stranded RNAs associated with maize stripe virus. Phytopathology 74, 909-915.
3. Gingery, R. E., Nault, L. R. & Bradfute, O. E. (1981). Maize stripe virus: characteristics of a member of a new virus class. Virology 112, 99-108.
4. Giorgi, C., Accardi, L., Nicoletti, L., Gro, M. C., Takehara, K., Hilditch, C., Morikawa, S. & Bishop, D. H. L. (1991). Sequences and coding strategies of the S RNAs of Toscana and Rift Valley fever viruses compared to those of Punta Toro, Sicilian Sandfly fever, and Uukuniemi viruses. Virology 180, 738-753.
5. Hibino, H. (1986). Rice grassy stunt virus. CMI/AAB Descriptions of Plant Viruses, no. 320.
6. Hibino, H., Usugi, T., Omura, T., Tsuchizaki, T., Shohara, K. & Iwasaki, M. (1985). Rice grassy stunt virus: a planthopper-borne circular filament. Phytopathology 75, 894-899.
7. Hirano, H., Komatsu, S., Nakamura, A., Kikuchi, F., Kajiwara, H., Tsunasawa, S. & Sakiyama, F. (1991). Structural homology between semidwarfism-related proteins and glutenin seed protein in rice (Oryza sativa L.). Theoretical and Applied Genetics 83, 153-158.
8. Huiet, L., Klaassen, V., Tsai, J. H. & Falk, B. W. (1991). Nucleotide sequence and RNA hybridization analyses revealed an ambisense coding strategy for maize stripe virus RNA3. Virology 182, 47-53.
9. Huiet, L., Tsai, J. H. & Falk, B. W. (1992). Complete sequence of maize stripe virus RNA4 and mapping of its subgenomic RNAs. Journal of General Virology 73, 1603-1607.
10. Huiet, L., Tsai, J. H. & Falk, B. W. (1993). Maize stripe virus RNA5 is of negative polarity and encodes a highly basic protein. Journal of General Virology 74, 549-554.
11. Ihara, T., Akashi, H. & Bishop, D. H. L. (1984). Novel coding strategy (ambisense genomic RNA) revealed by sequence analyses of Punta Toro phlebovirus S RNA. Virology 136, 293-306.
12. Iwasaki, M. & Shinkai, A. (1979). Occurrence of rice grassy stunt disease in Kyushu, Japan. Annals of the Phytopathological Society of Japan 45, 741-744.
13. Iwasaki, M., Nakano, M. & Shinkai, A. (1984). Infectivity of the leaf extract of rice grassy stunt virus-infected rice plant. 2. Fractions after sucrose density gradient centrifugation. Annals of the Phytopathological Society of Japan 50, 440 (Japanese abstract).
14. Kakutani, T., Hayano, Y., Hayashi, T. & Minobe, Y. (1990). Ambisense segment 3 of rice stripe virus: possible evolutionary relationship with phleboviruses and uukuviruses (Bunyaviridae). Journal of General Virology 71, 1427-1432.
15. Kiso, A. & Yamamoto, T. (1973). Infection and symptom development in rice stripe disease, with special reference to disease-specific protein other than virus. Review of Plant Protection Research 6, 75-100.
16. Miranda, G. J. & Koganezawa, H. (1995). Identification, purification, and serological detection of the major noncapsid protein of rice grassy stunt virus. Phytopathology 85, 1530-1533.
17. Ramirez, B.-C. & Haenni, A.-L. (1994). Molecular biology of tenuiviruses, a remarkable group of plant viruses. Journal of General Virology 75, 467-475.
18. Ramirez, B.-C., Macaya, G., Calvert, L. A. & Haenni, A.-L. (1992). Rice hoja blanca virus genome characterization and expression in vitro. Journal of General Virology 73, 1457-1464.
19. Ramirez, B.-C., Lozano, I., Constantino, L.-M., Haenni, A.-L. & Calvert, L. A. (1993). Complete nucleotide sequence and coding strategy of rice hoja blanca virus RNA4. Journal of General Virology 74, 2463-2468.
20. Rivera, C. T., Ou, S. H. & Iida, T. T. (1966). Grassy stunt disease of rice and its transmission by the planthopper Nilaparvata lugens Stål. Plant Disease Reporter 50, 453-456.
21. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
22. Simons, J. F., Hellman, U. & Petterson, R. F. (1990). Uukuniemi virus S segment: ambisense coding strategy, packaging of complementary strands into virions, and homology to members of the genus Phlebovirus. Journal of Virology 64, 247-255.
23. Takahashi, M., Toriyama, S., Kikuchi, Y., Hayakawa, T. & Ishihama, A. (1990). Complementarity between the 5′-and 3′-terminal sequences of rice stripe virus RNAs. Journal of General Virology 71, 2817-2821.
24. Takahashi, M., Toriyama, S., Hamamatsu, C. & Ishihama, A. (1993). Nucleotide sequence and possible ambisense coding strategy of rice stripe virus RNA segment 2. Journal of General Virology 74, 769-773.
25. Toriyama, S. (1982). Characterization of rice stripe virus: a heavy component carrying infectivity. Journal of General Virology 61, 187-195.
26. Toriyama, S. (1985). Purification and biological properties of rice grassy stunt virus. Annals of the Phytopathological Society of Japan 51, 59 (Japanese abstract).
27. Toriyama, S. (1986). An RNA-dependent RNA polymerase associated with the filamentous nucleoproteins of rice stripe virus. Journal of General Virology 67, 1247-1255.
28. Toriyama, S. (1987). Ribonucleic acid polymerase activity in filamentous nucleoproteins of rice grassy stunt virus. Journal of General Virology 68, 925-929.
29. Toriyama, S. (1995). Viruses and molecular biology of tenuiviruses. In Pathogenesis and Host Specificity in Plant Diseases, vol. 3, Viruses and Viroids, pp. 211-223. Edited by R. P. Singh, U. S. Singh & K. Kohmoto. Oxford: Pergamon Press.
30. Toriyama, S. & Tomaru, K. (1995). Genus Tenuivirus. In Virus Taxonomy. Sixth Report of the International Committee on Taxonomy of Viruses, pp. 316-318. Edited by F. A. Murphy, C. M. Fauquet, D. H. L. Bishop, S. A. Ghabrial, A. W. Jarvis, G. P. Martelli, M. A. Mayo & M. D. Summers. Vienna & New York: Springer-Verlag.
31. Toriyama, S. & Watanabe, Y. (1989). Characterization of single-and double-stranded RNAs in particles of rice stripe virus. Journal of General Virology 70, 505-511.
32. Toriyama, S., Takahashi, M., Sano, Y., Shimizu, T. & Ishihama, A. (1994). Nucleotide sequence of RNA1, the largest genomic segment of rice stripe virus, the prototype of the tenuivirus. Journal of General Virology 75, 3569-3579.
33. Zhu, Y., Hayakawa, T., Toriyama, S. & Takahashi, M. (1991). Complete nucleotide sequence of RNA3 of rice stripe virus: an ambisense coding strategy. Journal of General Virology 72, 763-767.
34. Zhu, Y., Hayakawa, T. & Toriyama, S. (1992). Complete nucleotide sequence of RNA4 of rice stripe virus isolate T, and comparison with another isolate and with maize stripe virus. Journal of General Virology 73, 1309-1312.