Repair pattern in the β-globin gene cluster of human fibroblasts after ultraviolet irradiation

European Journal of Biochemistry

Volumn 248, Issue 3, 1997, Pages 669-675

  Chakarov, Stoyan ^a   Stoilov, Peter ^b   Alexandrov, Alexander ^b   Russev, George ^b  

^a UNIVERSITY OF SOFIA   (Bulgaria)

^b INSTITUTE OF MOLECULAR BIOLOGY   (Bulgaria)

Author keywords

Bromodeoxyuridine; Eukaryotic DNA repair; Globin cluster

Indexed keywords

BETA GLOBIN;

ARTICLE; CELL CULTURE; CONTROLLED STUDY; DNA DAMAGE; DNA REPAIR; DNA RNA HYBRIDIZATION; FIBROBLAST; GENE CLUSTER; HUMAN; HUMAN CELL; IMMUNOCYTOCHEMISTRY; IN VITRO STUDY; PRIORITY JOURNAL; TECHNIQUE; ULTRAVIOLET IRRADIATION;

EUKARYOTA;

EID: 0030880226     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1432-1033.1997.00669.x     Document Type: Article

References (35)

1. Tornalleti, S. & Pfeifer, P. (1994) Slow repair of pyrimidine dimers at p53 mutation hotspots in skin cancer, Science 263, 1436-1438.
2. Gao, S., Drouin, R. & Holmquist, G. (1994) DNA repair rates mapped along the human PGK1 gene art nucleotide resolution, Science 263, 1438-1440.
3. Mellon, I., Bhor, V. A. & Hanawalt, P. C. (1986) Preferential repair of an active gene in human cells, Proc. Natl Acad. Sci. USA 83, 8878-8882.
4. Hanawalt, P. C. (1989) Preferential repair of damage in actively transcribed DNA sequences in vivo, Genome 31, 605-611.
5. Melon, I. & Hanawalt, P. C. (1989) Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed strand, Nature 342, 95-98.
6. Schaeffer, L., Roy, R., Humbert, S., Moncollin, V., Vermeulen, W., Hoijmakers, J. H. J., Chambon, P. & Egly, J.-M. (1993) DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor, Science 260, 58-63.
7. Drapkin, R., Reardon, J. T., Ansari, A., Huang, J. C., Zavel, L., Ahn, K., Sancar, A. & Reinberg, D. (1994) Dual role of TFIIH in DNA repair and in transcription by RNA polymerase II, Nature 368, 769-772.
8. Drapkin, R., Sancar, R. & Reinberg, D. (1994) Where transcription meets repair, Cell 77, 9-12.
9. Selby, C. P. & Sancar, A. (1993) Molecular mechanism of transcription-repair coupling, Science 260, 53-58.
10. Aboussekhra, A. & Wood, R. (1994) Repair of ultraviolet light-damaged DNA by mammalian cells and Sacharomyces cerivisiae, Curr. Opin. Genet. Dev. 4, 212-220.
11. Aboussekhra, A., Biggerstaff, M., Shivji, M., Vilpo, J., Moncollin, V., Podust, V., Protic, M., Hubscher, U., Egly, M.-J. & Wood, R. (1995) Mammalian DNA nucleotide excision repair reconstituted with purified protein components, Cell 24, 859-868.
12. Russev, G. & Boulikas, T. (1992) Repair of transcriptionally active and inactive genes during S and G2 phases of the cell cycle, Eur. J. Biochem. 204, 267-272.
13. Van Hoffen, A., Venema, J., Meschini, R., van Zeeland, A. A. & Mullenders, L. H. F. (1995) Transcription-coupled repair removes both cyclobutane pyrimidine dimers and 6-4 photoproducts with equal efficiency and in a sequental way from transcribed DNA in Xeroderma pigmentosum group C fibroblasts, EMBO J. 14, 360-367.
14. Mullenders, L. H. F., van Kesteren, A. C., Bussman, C. J. M., van Zeeland, A. A. & Natarajan, A. T. (1986) Distribution of ultraviolet-induced repair events in higher-order chromatin loops in human and hamster fibroblasts, Carcinogenesis 7, 995-1002.
15. Mullenders, L. H. F., van Kesteren, A. C., Bussman, C. J. M., van Zeeland, A. A. & Natarajan, A. T. (1987) Preferential repair of nuclear matrix-associated DNA in xeroderma pigmentosum complementation group C, Mutat. Res. 141, 75-82.
16. Mullenders, L. H., Venema, J., van Hoffen, A., Mayne, L. V., Natarajan, A. T. & van Zeeland, A. A. (1990) The role of nuclear matrix in repair, Prog. Clin. Biol. Res. 340A, 223-232.
17. Maniatis, T., Fritsch, E. F., Lauer, J. & Lawn, R. M. (1981) Molecular genetics of human hemoglobins, Annu. Rev. Genet. 14, 145-178.
18. Jarman, A. P. & Higgs, D. R. (1988) Nuclear scaffold attachment sites in the human globin gene complexes, EMBO J. 7, 3337-3344.
19. Kitsberg, D., Selig, S., Keshet, I. & Cedar, H. (1993) Replication structure of the human β-globin gene domain, Nature 366, 588
20. Grosveld, F., van Assendelft, G. B., Greaves, D. R. & Kollias, G. (1987) Position independent, high-level expression of the human β-globin gene in transgenic mice, Cell 51, 975-985.
21. Tuan, D., Solomon, W., Li, Q. & London, I. M. (1985) The β-like globin gene domain in human erythroid cells, Proc. Natl Acad. Sci. USA 82, 6384-6388.
22. Maniatis, T., Fritsch, E. F. & Sambrook, J. (1982) Molecular cloning, a laboratory manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor NY.
23. Nagata, Y., Yokota, H., Kosuda, O., Yokoo, K., Takemura, K. & Kikuchi, K. (1985) Quantification of picogram levels of specific DNA immobilized in microtiter wells, FEBS Lett. 183, 379-382.
24. Vassilev, L. & Russev, G. (1988) Purification of nascent DNA chains by immunoprecipitation with anti-BrdUrd antibodies, Nucleic Acids Res. 16, 10397.
25. Saxena, J., Hays, J. & Ackerman, E. (1990) Excision repair of ultraviolet-damaged plasmid DNA in Xenopus oocytes is mediated by DNA polymerase α (and/or δ), Nucleic Acids Res. 18, 7425-7432.
26. Kalinowski, D., Illenye, S. & Van Houten, B. (1992) Analysis of DNA damage and repair in murine leukemia L1210 cell using a quantitative polymerase chain reaction assay, Nucleic Acids. Res. 20, 3485-3494.
27. Bohr, V. A., Smith, C. A., Okumoto, D. S. & Hanawalt, P. C. (1985) DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall, Cell 40, 359-369.
28. Cook, P. R. & Brazell, J. A., (1975) Supercoils in human DNA, J. Cell Sci. 19, 261-279.
29. Denissenko, M., Venkatachalam, S., Yamasaki, E. & Wani, A. (1994) Assessment of DNA damage and repair in specific genomic regions by quantitative immuno-coupled PCR, Nucleic Acids. Res. 22, 2351-2359.
30. 6-ethylguanine in transcribed and nontranscribed Genes of the rat, J. Biol. Chem. 269, 1681-1686.
31. Vassilev, L. & Russev, G. (1984) Hydroxyurea reatment does not prevent initiation of DNA synthesis in EAT cells and leads to the accumulation of short DNA fragments containing the rteplication origins, Biochim. Biophys. Acta 781, 39-44.
32. Lan, S. U. & Smerdon, M. J. (1885) A nonuniform distribution of excision repair synthesis in nucleosome core DNA, Biochemistry 24, 7771-7783.
33. Jensen, K. A. & Smerdon, M. J. (1990) DNA repair within nucleosome cores of ultraviolet-irradiated human cells, Biochemistry 29, 4773-4782.
34. Terleth, C., van Sluis, C. A. & van der Putte, P. (1989) Differential repair of ultraviolet damage in Saccharomyces cerevisiae, Nucleic Acids Res. 17, 4433-4439.
35. Jackson, D. A., Balajee, A. S., Mullenders, L. & Cook, P. R. (1994) Sites in human nuclei where DNA damaged by ultraviolet light is repaired: visualization and localization relative to the nucleosceleton, J. Cell Sci. 107, 1745-1752.