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Volumn 87, Issue 8, 1997, Pages 853-861

Specific detection of Clavibacter michiganensis subsp. sepedonicus by amplification of three unique DNA sequences isolated by subtraction hybridization

Author keywords

Genome; Potato bacterial ring rot; Subtraction

Indexed keywords

BACTERIA (MICROORGANISMS); CLAVIBACTER; CLAVIBACTER MICHIGANENSIS; CLAVIBACTER MICHIGANENSIS SUBSP. INSIDIOSUS; CLAVIBACTER MICHIGANENSIS SUBSP. MICHIGANENSIS; CLAVIBACTER MICHIGANENSIS SUBSP. SEPEDONICUS; RHODOCOCCUS; SOLANUM TUBEROSUM;

EID: 0030878913     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO.1997.87.8.853     Document Type: Article
Times cited : (52)

References (45)
  • 2
    • 0001602751 scopus 로고
    • Serological detection of nonmucoid strains of Clavibacter michiganensis subsp. sepedonicus in potato
    • Baer, D., and Gudmestad, N. C. 1993. Serological detection of nonmucoid strains of Clavibacter michiganensis subsp. sepedonicus in potato. Phytopathology 83:157-163.
    • (1993) Phytopathology , vol.83 , pp. 157-163
    • Baer, D.1    Gudmestad, N.C.2
  • 3
    • 0000967793 scopus 로고
    • A simple method to monitor growth of bacterial populations in leaf tissue
    • Bertoni, G., and Mills, D. 1987. A simple method to monitor growth of bacterial populations in leaf tissue. Phytopathology 77:832-835.
    • (1987) Phytopathology , vol.77 , pp. 832-835
    • Bertoni, G.1    Mills, D.2
  • 4
    • 0001073533 scopus 로고
    • Effect of inoculum dose and preparation, strain variation, and plant growth conditions on the eggplant bioassay for bacterial ring rot
    • Bishop, A. L., and Slack, S. A. 1987. Effect of inoculum dose and preparation, strain variation, and plant growth conditions on the eggplant bioassay for bacterial ring rot. Am. Potato J. 64:239-246.
    • (1987) Am. Potato J. , vol.64 , pp. 239-246
    • Bishop, A.L.1    Slack, S.A.2
  • 5
    • 0001690759 scopus 로고
    • Effect of cultivar, inoculum dose, and strain of Clavibacter michiganense subsp. sepedonicum on symptom development in potatoes
    • Bishop, A. L., and Slack, S. A. 1987. Effect of cultivar, inoculum dose, and strain of Clavibacter michiganense subsp. sepedonicum on symptom development in potatoes. Phytopathology 77:1085-1089.
    • (1987) Phytopathology , vol.77 , pp. 1085-1089
    • Bishop, A.L.1    Slack, S.A.2
  • 6
    • 0027476682 scopus 로고
    • Multiplex polymerase chain reaction for detection and differentiation of the microbial insecticide Bacillus thuringiensis
    • Bourgue, S. N., Valero, J. R., Mercier, J., Lavoie, M. C., and Levesque, R. C. 1993. Multiplex polymerase chain reaction for detection and differentiation of the microbial insecticide Bacillus thuringiensis. Appl. Environ. Microbiol. 59:523-527.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 523-527
    • Bourgue, S.N.1    Valero, J.R.2    Mercier, J.3    Lavoie, M.C.4    Levesque, R.C.5
  • 7
    • 0025912003 scopus 로고
    • The use of subtractive hybridization to obtain a DNA probe specific for Pseudomonas solanacearum race 3
    • Cook, D., and Sequeira, L. 1990. The use of subtractive hybridization to obtain a DNA probe specific for Pseudomonas solanacearum race 3. Mol. Gen. Genet. 227:401-410.
    • (1990) Mol. Gen. Genet. , vol.227 , pp. 401-410
    • Cook, D.1    Sequeira, L.2
  • 8
    • 0027953263 scopus 로고
    • Isolation by genomic subtraction of DNA probes specific for Erwinia carotovora subsp. atroseptica
    • Darrasse, A., Kotoujansky, A., and Bertheau, Y. 1994. Isolation by genomic subtraction of DNA probes specific for Erwinia carotovora subsp. atroseptica. Appl. Environ. Microbial. 60:298-306.
    • (1994) Appl. Environ. Microbial. , vol.60 , pp. 298-306
    • Darrasse, A.1    Kotoujansky, A.2    Bertheau, Y.3
  • 9
    • 0010540530 scopus 로고
    • Taxonomy of plant-pathogenic coryneform bacteria
    • Davis, M. J. 1986. Taxonomy of plant-pathogenic coryneform bacteria. Annu. Rev. Phytopathol. 24:115-140.
    • (1986) Annu. Rev. Phytopathol. , vol.24 , pp. 115-140
    • Davis, M.J.1
  • 10
    • 0000002635 scopus 로고
    • Cross-reaction of Corynebacterium sepedonicum antisera with C. insidiosum, C. michiganense, and an unidentified coryneform bacterium
    • De Boer, S. H. 1982. Cross-reaction of Corynebacterium sepedonicum antisera with C. insidiosum, C. michiganense, and an unidentified coryneform bacterium. Phytopathology 72:1474-1478.
    • (1982) Phytopathology , vol.72 , pp. 1474-1478
    • De Boer, S.H.1
  • 11
    • 0012195355 scopus 로고
    • Evaluation of an agar immunodiffusion procedure for confirming bacterial ring rot diagnoses
    • De Boer, S. H. 1983 Evaluation of an agar immunodiffusion procedure for confirming bacterial ring rot diagnoses. Am. Potato J. 60:661-669.
    • (1983) Am. Potato J. , vol.60 , pp. 661-669
    • De Boer, S.H.1
  • 12
    • 85036484804 scopus 로고
    • Detection of Clavibacter michiganense subsp. sepedonicum in potato
    • A. W. Saettler, N. W. Schaad, and D. A. Roth, eds. The American Phytopathology Society, St. Paul, MN
    • De Boer, S. H. 1989. Detection of Clavibacter michiganense subsp. sepedonicum in potato. Pages 92-107 in: Detection of Bacteria in Seed and Other Planting Material. A. W. Saettler, N. W. Schaad, and D. A. Roth, eds. The American Phytopathology Society, St. Paul, MN.
    • (1989) Detection of Bacteria in Seed and Other Planting Material , pp. 92-107
    • De Boer, S.H.1
  • 13
  • 14
    • 1842385321 scopus 로고
    • An automated microscope system for estimating the population of Corynebacterium sepedonicum cells labelled with monoclonal antibodies in immunofluorescence
    • De Boer, S. H., and Hall, J. W. 1988. An automated microscope system for estimating the population of Corynebacterium sepedonicum cells labelled with monoclonal antibodies in immunofluorescence. Can. J. Plant Pathol. 10:215-220.
    • (1988) Can. J. Plant Pathol. , vol.10 , pp. 215-220
    • De Boer, S.H.1    Hall, J.W.2
  • 15
    • 0001390754 scopus 로고
    • Determination of population densities of Corynebacterium sepedonicum in potato stems during the growing season
    • De Boer, S. H., and McCann, M. 1989. Determination of population densities of Corynebacterium sepedonicum in potato stems during the growing season. Phytopathology 79:946-951.
    • (1989) Phytopathology , vol.79 , pp. 946-951
    • De Boer, S.H.1    McCann, M.2
  • 16
    • 0000977949 scopus 로고
    • Detection of Corynebacterium sepedonicum in potato cultivars with different propensities to express ring rot symptoms
    • De Boer, S. H., and McCann, M. 1990. Detection of Corynebacterium sepedonicum in potato cultivars with different propensities to express ring rot symptoms. Am. Potato J. 67:685-694.
    • (1990) Am. Potato J. , vol.67 , pp. 685-694
    • De Boer, S.H.1    McCann, M.2
  • 17
    • 0342786281 scopus 로고
    • Current status and prospects for detecting and controlling bacterial ring rot of potatoes in North America
    • De Boer, S. H., and Slack, S. A. 1984. Current status and prospects for detecting and controlling bacterial ring rot of potatoes in North America. Plant Dis. 68:841-844.
    • (1984) Plant Dis. , vol.68 , pp. 841-844
    • De Boer, S.H.1    Slack, S.A.2
  • 18
    • 0001384009 scopus 로고
    • Production of monoclonal antibodies to Corynebacterium sepedonicum
    • De Boer, S. H., and Wieczorek, A. 1984. Production of monoclonal antibodies to Corynebacterium sepedonicum. Phytopathology 74:1431-1434.
    • (1984) Phytopathology , vol.74 , pp. 1431-1434
    • De Boer, S.H.1    Wieczorek, A.2
  • 19
    • 0001535038 scopus 로고
    • An ELISA test for bacterial ring rot of potato with a new monoclonal antibody
    • De Boer, S. H., Wieczorek, A., and Kummer, A. 1988. An ELISA test for bacterial ring rot of potato with a new monoclonal antibody. Plant Dis. 72:874-878.
    • (1988) Plant Dis. , vol.72 , pp. 874-878
    • De Boer, S.H.1    Wieczorek, A.2    Kummer, A.3
  • 20
    • 0029170520 scopus 로고
    • Extraction of Clavibacter michiganensis subsp. sepedonicus from composite samples of potato tubers
    • Dinesen, I. G., and De Boer, S. H. 1995. Extraction of Clavibacter michiganensis subsp. sepedonicus from composite samples of potato tubers. Am. Potato J. 72:133-142.
    • (1995) Am. Potato J. , vol.72 , pp. 133-142
    • Dinesen, I.G.1    De Boer, S.H.2
  • 21
    • 0027132985 scopus 로고
    • Comparison of a DNA hybridization probe and ELISA for the detection of Clavibacter michiganensis subsp. sepedonicus in field-grown potatoes
    • Drennan, J. L., Westra, A. A. G., Slack, S. A., Delserone, L. M., Collmer, A., Gudmestad, N. C., and Oleson, A. E. 1993. Comparison of a DNA hybridization probe and ELISA for the detection of Clavibacter michiganensis subsp. sepedonicus in field-grown potatoes. Plant Dis. 77:1243-1247.
    • (1993) Plant Dis. , vol.77 , pp. 1243-1247
    • Drennan, J.L.1    Westra, A.A.G.2    Slack, S.A.3    Delserone, L.M.4    Collmer, A.5    Gudmestad, N.C.6    Oleson, A.E.7
  • 22
    • 0020793569 scopus 로고
    • A technique for radiolabelling DNA restriction endonuclease fragments to high specificity activity
    • Feinberg, A. P., and Vogelstein, B. 1983. A technique for radiolabelling DNA restriction endonuclease fragments to high specificity activity. Anal. Biochem. 132:6-13.
    • (1983) Anal. Biochem. , vol.132 , pp. 6-13
    • Feinberg, A.P.1    Vogelstein, B.2
  • 23
    • 0028179960 scopus 로고
    • Identification of Clavibacter michiganensis subsp. sepedonicus using the polymerase chain reaction
    • Firrao, G., and Locci, R. 1994. Identification of Clavibacter michiganensis subsp. sepedonicus using the polymerase chain reaction. Can. J. Microbiol. 40:148-151.
    • (1994) Can. J. Microbiol. , vol.40 , pp. 148-151
    • Firrao, G.1    Locci, R.2
  • 25
    • 0028900009 scopus 로고
    • Microtitration plate enzyme immunoassay to detect PCR-amplified DNA from Candida species in blood
    • Fujita, S.-I., Lasker, B. A., Lott, T. J., Reiss, E., and Morrison, C. J. 1995. Microtitration plate enzyme immunoassay to detect PCR-amplified DNA from Candida species in blood. J. Clin. Microbiol. 33:962-967.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 962-967
    • Fujita, S.-I.1    Lasker, B.A.2    Lott, T.J.3    Reiss, E.4    Morrison, C.J.5
  • 26
    • 0019862344 scopus 로고
    • A rapid boiling method for the preparation of bacterial plasmids
    • Holmes, D. S., and Quigley, M. 1981. A rapid boiling method for the preparation of bacterial plasmids. Anal. Biochem. 114:193-197.
    • (1981) Anal. Biochem. , vol.114 , pp. 193-197
    • Holmes, D.S.1    Quigley, M.2
  • 27
    • 0029185433 scopus 로고
    • Quantitative detection of Clavibacter michiganensis subsp. sepedonicus by competitive polymerase chain reaction
    • Hu, X., Lai, F.-M., Reddy, S. N., and Ishimaru, C. A. 1995. Quantitative detection of Clavibacter michiganensis subsp. sepedonicus by competitive polymerase chain reaction. Phytopathology 85:1468-1473.
    • (1995) Phytopathology , vol.85 , pp. 1468-1473
    • Hu, X.1    Lai, F.-M.2    Reddy, S.N.3    Ishimaru, C.A.4
  • 28
    • 0000519937 scopus 로고
    • Specific identification of Clavibacter michiganensis subsp. sepedonicum by DNA-hybridization probes
    • Johansen, I. E., Rasmussen, O. F., and Heide, M. 1989. Specific identification of Clavibacter michiganensis subsp. sepedonicum by DNA-hybridization probes. Phytopathology 79:1019-1023.
    • (1989) Phytopathology , vol.79 , pp. 1019-1023
    • Johansen, I.E.1    Rasmussen, O.F.2    Heide, M.3
  • 29
    • 0028795166 scopus 로고
    • Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus
    • Li, X., and De Boer, S. H. 1995. Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus. Phytopathology 85:837-842.
    • (1995) Phytopathology , vol.85 , pp. 837-842
    • Li, X.1    De Boer, S.H.2
  • 30
    • 0344571575 scopus 로고
    • Bacterial ring rot disease development in resistant and susceptible cultivars
    • Manzer, F. E., and Kurowski, C. J. 1992. Bacterial ring rot disease development in resistant and susceptible cultivars. Am. Potato J. 69:363-370.
    • (1992) Am. Potato J. , vol.69 , pp. 363-370
    • Manzer, F.E.1    Kurowski, C.J.2
  • 31
    • 85036486728 scopus 로고    scopus 로고
    • Development of a PCR ELISA-based method for specific detection of Clavibacter michiganensis subsp. sepedonicus
    • Mills, D., and Russell, B. W. 1996. Development of a PCR ELISA-based method for specific detection of Clavibacter michiganensis subsp. sepedonicus. (Abstr.) Phytopathology 86:S11.
    • (1996) Phytopathology , vol.86
    • Mills, D.1    Russell, B.W.2
  • 32
    • 0027751855 scopus 로고
    • Specific 16S ribosomal RNA targeted oligonucleotide probe against Clavibacter michiganensis subsp. sepedonicus
    • Mirza, M. S., Rademaker, J. L. W., Janse, J. D., and Akkermans, A. D. L. 1993. Specific 16S ribosomal RNA targeted oligonucleotide probe against Clavibacter michiganensis subsp. sepedonicus. Can. J. Microbiol. 39:1029-1034.
    • (1993) Can. J. Microbiol. , vol.39 , pp. 1029-1034
    • Mirza, M.S.1    Rademaker, J.L.W.2    Janse, J.D.3    Akkermans, A.D.L.4
  • 33
    • 0002751065 scopus 로고
    • Homology of pCS1 plasmid sequences with chromosomal DNA in Clavibacter michiganensis subsp. sepedonicum: Evidence for the presence of a repeated sequence and plasmid integration
    • Mogen, B. D., and Oleson, A. E. 1987. Homology of pCS1 plasmid sequences with chromosomal DNA in Clavibacter michiganensis subsp. sepedonicum: Evidence for the presence of a repeated sequence and plasmid integration. Appl. Environ. Microbiol. 53:2476-2481.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 2476-2481
    • Mogen, B.D.1    Oleson, A.E.2
  • 34
    • 0001592222 scopus 로고
    • Distribution and partial characterization of pCS1, a highly conserved plasmid present in Clavibacter michiganense subsp. sepedonicum
    • Mogen, B. D., Oleson, A. E., Sparks, R. B., Gudmestad, N. C., and Secor, G. A. 1988. Distribution and partial characterization of pCS1, a highly conserved plasmid present in Clavibacter michiganense subsp. sepedonicum. Phytopathology 78:1381-1386.
    • (1988) Phytopathology , vol.78 , pp. 1381-1386
    • Mogen, B.D.1    Oleson, A.E.2    Sparks, R.B.3    Gudmestad, N.C.4    Secor, G.A.5
  • 35
    • 0028609961 scopus 로고
    • Detection and identification of Clavibacter michiganensis subsp. sepedonicus and Clavibacter michiganensis subsp. michiganensis by nonradioactive hybridization, polymerase chain reaction, and restriction enzyme analysis
    • Rademaker, J. L. W., and Janse, J. D. 1994. Detection and identification of Clavibacter michiganensis subsp. sepedonicus and Clavibacter michiganensis subsp. michiganensis by nonradioactive hybridization, polymerase chain reaction, and restriction enzyme analysis. Can. J. Microbiol. 40:1007-1018.
    • (1994) Can. J. Microbiol. , vol.40 , pp. 1007-1018
    • Rademaker, J.L.W.1    Janse, J.D.2
  • 39
    • 0026439342 scopus 로고
    • Isolation of a Pseudomonas solanacearum-specific DNA probe by subtraction hybridization and construction of species-specific oligonucleotide primers for sensitive detection by the polymerase chain reaction
    • Seal, S. E., Jackson, L. A., and Daniels, M. J. 1992. Isolation of a Pseudomonas solanacearum-specific DNA probe by subtraction hybridization and construction of species-specific oligonucleotide primers for sensitive detection by the polymerase chain reaction. Appl. Environ. Microbiol. 58:3751-3758.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 3751-3758
    • Seal, S.E.1    Jackson, L.A.2    Daniels, M.J.3
  • 40
    • 0000027088 scopus 로고    scopus 로고
    • Comparison of PCR, ELISA, and DNA hybridization for the detection of Clavibacter michiganensis subsp. sepedonicus in field-grown potatoes
    • Slack, S. A., Drennan, J. L., Westra, A. A. G., Gudmestad, N. C., and Oleson, A. E. 1996. Comparison of PCR, ELISA, and DNA hybridization for the detection of Clavibacter michiganensis subsp. sepedonicus in field-grown potatoes. Plant Dis. 80:519-524.
    • (1996) Plant Dis. , vol.80 , pp. 519-524
    • Slack, S.A.1    Drennan, J.L.2    Westra, A.A.G.3    Gudmestad, N.C.4    Oleson, A.E.5
  • 41
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
    • (1975) J. Mol. Biol. , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 42
    • 0001191014 scopus 로고
    • Synthetic and complex media for the rapid detection of fluorescence of phytopathogenic Pseudomonads: Effect of the carbon source
    • Vidaver, A. K. 1967. Synthetic and complex media for the rapid detection of fluorescence of phytopathogenic Pseudomonads: Effect of the carbon source. Appl. Microbiol. 15:1523-1524.
    • (1967) Appl. Microbiol. , vol.15 , pp. 1523-1524
    • Vidaver, A.K.1
  • 43
    • 0038306041 scopus 로고
    • A DNA probe specific for serologically diverse strains of Erwinia carotovora
    • Ward, L. J., and De Boer, S. H. 1990. A DNA probe specific for serologically diverse strains of Erwinia carotovora. Phytopathology 80: 665-669.
    • (1990) Phytopathology , vol.80 , pp. 665-669
    • Ward, L.J.1    De Boer, S.H.2
  • 44
    • 0028134306 scopus 로고
    • Comparison of some diagnostic assays for bacterial ring rot of potato: A case study
    • Westra, A. A. G., and Slack, S. A. 1994. Comparison of some diagnostic assays for bacterial ring rot of potato: A case study. Am. Potato J. 71: 557-565.
    • (1994) Am. Potato J. , vol.71 , pp. 557-565
    • Westra, A.A.G.1    Slack, S.A.2
  • 45
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yannisch-Perron, C., Vieira, J., and Messing, J. 1985. Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yannisch-Perron, C.1    Vieira, J.2    Messing, J.3


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