메뉴 건너뛰기




Volumn 3, Issue 9, 1997, Pages 1016-1027

Association of a group I intron with its splice junction in 50s ribosomes: Implications for intron toxicity

Author keywords

Catalytic RNA; Pre rRNA processing; Self splicing

Indexed keywords

RNA 23S;

EID: 0030874893     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (38)

References (45)
  • 1
    • 0025688976 scopus 로고
    • Phage T4 introns: Self-splicing and mobility
    • Beifort M. 1990. Phage T4 introns: Self-splicing and mobility. Annu Rev Genet 24:363-385.
    • (1990) Annu Rev Genet , vol.24 , pp. 363-385
    • Beifort, M.1
  • 2
    • 0025286439 scopus 로고
    • Genetic and molecular analysis of RNA splicing in E. coli
    • Belfort M, Ehrenman K, Chandry PS. 1990. Genetic and molecular analysis of RNA splicing in E. coli. Methods Enzymol 181:521-539.
    • (1990) Methods Enzymol , vol.181 , pp. 521-539
    • Belfort, M.1    Ehrenman, K.2    Chandry, P.S.3
  • 3
    • 0029616336 scopus 로고
    • Mechanisms of intron mobility
    • Belfort M, Perlman PS. 1995. Mechanisms of intron mobility. J. Biol Chem 270:30237-30240.
    • (1995) J. Biol Chem , vol.270 , pp. 30237-30240
    • Belfort, M.1    Perlman, P.S.2
  • 4
    • 0024428421 scopus 로고
    • A site-specific endonuclease and co-conversion of flanking exons associated with the mobile td intron of phage T4
    • Bell-Pedersen D, Quirk S, Aubrey M, Belfort M. 1989. A site-specific endonuclease and co-conversion of flanking exons associated with the mobile td intron of phage T4. Gene 82:119-126.
    • (1989) Gene , vol.82 , pp. 119-126
    • Bell-Pedersen, D.1    Quirk, S.2    Aubrey, M.3    Belfort, M.4
  • 5
    • 0021099454 scopus 로고
    • Fate of intervening sequence ribonucleic acid: Excision and cyclization of the Tetrahymena ribosomal ribonucleic acid intervening sequence in vivo
    • Brehm SL, Cech TR. 1983. Fate of intervening sequence ribonucleic acid: Excision and cyclization of the Tetrahymena ribosomal ribonucleic acid intervening sequence in vivo. Biochemistry 22:2390-2397.
    • (1983) Biochemistry , vol.22 , pp. 2390-2397
    • Brehm, S.L.1    Cech, T.R.2
  • 6
    • 0025169751 scopus 로고
    • The excision of intervening sequences from Salmonella 23S ribosomal RNA
    • Burgin AB, Parodos K, Lane DJ, Pace NR. 1990. The excision of intervening sequences from Salmonella 23S ribosomal RNA. Cell 60:405-414.
    • (1990) Cell , vol.60 , pp. 405-414
    • Burgin, A.B.1    Parodos, K.2    Lane, D.J.3    Pace, N.R.4
  • 7
    • 0025810123 scopus 로고
    • Intron phylogeny: Anew hypothesis
    • Cavalier-Smith T. 1991. Intron phylogeny: Anew hypothesis. Trends Genet 7:145-148.
    • (1991) Trends Genet , vol.7 , pp. 145-148
    • Cavalier-Smith, T.1
  • 8
    • 0021895324 scopus 로고
    • Self-splicing RNA: Implications for evolution
    • Cech TR. 1985. Self-splicing RNA: Implications for evolution. Int Rev Cyt 93:3-22.
    • (1985) Int Rev Cyt , vol.93 , pp. 3-22
    • Cech, T.R.1
  • 9
    • 0025367254 scopus 로고
    • Self-splicing of group I introns
    • Cech TR. 1990. Self-splicing of group I introns. Annu Rev Biochem 59:543-568.
    • (1990) Annu Rev Biochem , vol.59 , pp. 543-568
    • Cech, T.R.1
  • 10
    • 0018670287 scopus 로고
    • Localization of transcribed regions of extra-chromosomal ribosomal RNA genes of Tetrahymena thermophila by R-loop mapping
    • Cech TR, Rio DC. 1979. Localization of transcribed regions of extra-chromosomal ribosomal RNA genes of Tetrahymena thermophila by R-loop mapping. Proc Natl Acad Sci USA 76:5051-5055.
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 5051-5055
    • Cech, T.R.1    Rio, D.C.2
  • 11
    • 0012636820 scopus 로고
    • Speculations on the early course of evolution
    • Darnell JE, Doolittle WF. 1986. Speculations on the early course of evolution. Proc Natl Acad Sci USA 83:1271-1275.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 1271-1275
    • Darnell, J.E.1    Doolittle, W.F.2
  • 12
    • 0018782651 scopus 로고
    • Extrachromosomal ribosomal RNA genes in Tetrahymena structure and evolution
    • Din N, Engberg J. 1979. Extrachromosomal ribosomal RNA genes in Tetrahymena structure and evolution. J. Mol Biol 234:555-574.
    • (1979) J. Mol Biol , vol.234 , pp. 555-574
    • Din, N.1    Engberg, J.2
  • 13
    • 0017149467 scopus 로고
    • Total reconstitution and assembly of 50S subunits from Escherichia coli ribosomes in vitro
    • Dohme F, Nierhaus KH. 1976. Total reconstitution and assembly of 50S subunits from Escherichia coli ribosomes in vitro. J. Mol Biol 107:585-599.
    • (1976) J. Mol Biol , vol.107 , pp. 585-599
    • Dohme, F.1    Nierhaus, K.H.2
  • 14
    • 0029800606 scopus 로고    scopus 로고
    • Analysis of rate determining conformational changes during self-splicing of Tetrahymena intron
    • Emerick VL, Pan J, Woodson SW. 1996. Analysis of rate determining conformational changes during self-splicing of Tetrahymena intron. Biochemistry 35:13469-13477.
    • (1996) Biochemistry , vol.35 , pp. 13469-13477
    • Emerick, V.L.1    Pan, J.2    Woodson, S.W.3
  • 15
    • 0027724213 scopus 로고
    • Self-splicing of Tetrahymena pre-rRNA is decreased by misfolding during transcription
    • Emerick VL, Woodson SA. 1993. Self-splicing of Tetrahymena pre-rRNA is decreased by misfolding during transcription. Biochemistry 32:14062-14067.
    • (1993) Biochemistry , vol.32 , pp. 14062-14067
    • Emerick, V.L.1    Woodson, S.A.2
  • 17
    • 0003026069 scopus 로고
    • Evolution of ribosomal DNA
    • MacIntyre RJ, ed. New York: Plenum
    • Gerbi SA. 1985. Evolution of ribosomal DNA. In: MacIntyre RJ, ed. Molecular evolutionary genetics. New York: Plenum, pp 419-517.
    • (1985) Molecular Evolutionary Genetics , pp. 419-517
    • Gerbi, S.A.1
  • 18
    • 0027583864 scopus 로고
    • Construction of a Chlamydomonas reinhardtii mutant with an intronless psbA gene
    • Johanningmeier U, Heiss S. 1993. Construction of a Chlamydomonas reinhardtii mutant with an intronless psbA gene. Plant Mol Biol 22:91-99.
    • (1993) Plant Mol Biol , vol.22 , pp. 91-99
    • Johanningmeier, U.1    Heiss, S.2
  • 20
    • 0030020170 scopus 로고    scopus 로고
    • Mapping the rRNA neighborhood of the acceptor end of tRNA in the ribosome
    • Joseph S, Noller HF. 1996. Mapping the rRNA neighborhood of the acceptor end of tRNA in the ribosome. EMBO J. 25:910-916.
    • (1996) EMBO J. , vol.25 , pp. 910-916
    • Joseph, S.1    Noller, H.F.2
  • 21
    • 0027305131 scopus 로고
    • Introns as mobile genetic elements
    • Lambowitz AM, Belfort M. 1993. Introns as mobile genetic elements. Annu Rev Biochem 62:587-622.
    • (1993) Annu Rev Biochem , vol.62 , pp. 587-622
    • Lambowitz, A.M.1    Belfort, M.2
  • 22
    • 0029074526 scopus 로고
    • Role for the highly conserved region of domain IV of 23S-like rRNA in subunit-subunit interactions at the peptidyl transferase centre
    • Leviev I, Levieva S, Garrett RA. 1995. Role for the highly conserved region of domain IV of 23S-like rRNA in subunit-subunit interactions at the peptidyl transferase centre. Nucleic Acids Res 23:1512-1517.
    • (1995) Nucleic Acids Res , vol.23 , pp. 1512-1517
    • Leviev, I.1    Levieva, S.2    Garrett, R.A.3
  • 23
    • 0016607629 scopus 로고
    • Intermediates and time kinetics of the in vivo assembly of Escherichia coli ribosomes
    • Lindahl L. 1975. Intermediates and time kinetics of the in vivo assembly of Escherichia coli ribosomes. J. Mol Biol 92:15-37.
    • (1975) J. Mol Biol , vol.92 , pp. 15-37
    • Lindahl, L.1
  • 24
    • 0030034498 scopus 로고    scopus 로고
    • The DExH box protein Suv3p is a component of a yeast mitochondrial 3′-to-5′ exoribonuclease that suppresses group I intron toxidty
    • Margossian SP, Li H, Zassenhaus HP, Butow RA. 1996. The DExH box protein Suv3p is a component of a yeast mitochondrial 3′-to-5′ exoribonuclease that suppresses group I intron toxidty. Cell 84:199-209.
    • (1996) Cell , vol.84 , pp. 199-209
    • Margossian, S.P.1    Li, H.2    Zassenhaus, H.P.3    Butow, R.A.4
  • 25
    • 0021811116 scopus 로고
    • - rDNA in the macronucleus of the ciliate Tetrahymena pigmentosa
    • - rDNA in the macronucleus of the ciliate Tetrahymena pigmentosa. Biochim Biophys Acta 825:30-38.
    • (1985) Biochim Biophys Acta , vol.825 , pp. 30-38
    • Nielsen, H.1    Engberg, J.2
  • 26
    • 0015924780 scopus 로고
    • Ribosomal proteins. XLIII. in vivo assembly of Escherichia coli ribosomal proteins
    • Nierhaus KH, Bordasch K, Homann HE. 1973. Ribosomal proteins. XLIII. In vivo assembly of Escherichia coli ribosomal proteins. J. Mol Biol 74:587-597.
    • (1973) J. Mol Biol , vol.74 , pp. 587-597
    • Nierhaus, K.H.1    Bordasch, K.2    Homann, H.E.3
  • 27
    • 0025733603 scopus 로고
    • Ribosomal RNA and translation
    • Noller HF. 1991. Ribosomal RNA and translation. Annu Rev Biochem 60:191-227.
    • (1991) Annu Rev Biochem , vol.60 , pp. 191-227
    • Noller, H.F.1
  • 29
    • 0028303486 scopus 로고
    • A rapid and efficient one-tube PCR based mutagenesis technique using Pfu DNA polymerase
    • Picard V, Ersdal-Badju E, Lu A, Bock SC. 1994. A rapid and efficient one-tube PCR based mutagenesis technique using Pfu DNA polymerase. Nucleic Acids Res 22:2587-2591.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2587-2591
    • Picard, V.1    Ersdal-Badju, E.2    Lu, A.3    Bock, S.C.4
  • 30
    • 0025012472 scopus 로고
    • Dominant lethal mutations in a conserved loop in 16S rRNA
    • Powers T, Noller H. 1990. Dominant lethal mutations in a conserved loop in 16S rRNA. Proc Natl Acad Sci USA 87:1042-1046.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 1042-1046
    • Powers, T.1    Noller, H.2
  • 31
    • 0020541811 scopus 로고
    • Improved plasmid vectors with a thermoinducible expression and temperature-regulated runaway replication
    • Remaut E, Tsao H, Fiers W. 1983. Improved plasmid vectors with a thermoinducible expression and temperature-regulated runaway replication. Gene 22:103-113.
    • (1983) Gene , vol.22 , pp. 103-113
    • Remaut, E.1    Tsao, H.2    Fiers, W.3
  • 33
    • 0029330798 scopus 로고
    • Reverse splicing of the Tetrahymena IVS: Evidence for multiple reaction sites in the 23S rRNA
    • Roman J, Woodson SA. 1995. Reverse splicing of the Tetrahymena IVS: Evidence for multiple reaction sites in the 23S rRNA. RNA 2:478-490.
    • (1995) RNA , vol.2 , pp. 478-490
    • Roman, J.1    Woodson, S.A.2
  • 34
    • 0014004365 scopus 로고
    • Polysomes extracted from Escherichia coli by freeze-thaw-lysozyme lysis
    • Ron EZ, Kohler RE, Davis BD. 1966. Polysomes extracted from Escherichia coli by freeze-thaw-lysozyme lysis. Science 153:1119-1120.
    • (1966) Science , vol.153 , pp. 1119-1120
    • Ron, E.Z.1    Kohler, R.E.2    Davis, B.D.3
  • 35
    • 0024271795 scopus 로고
    • Antibiotic resistance mutations in rRNA genes of Escherichia coli
    • Sigmund CD, Ettayebi M, Borden A, Morgan EA. 1988. Antibiotic resistance mutations in rRNA genes of Escherichia coli. Methods Enzymol 264:673-690.
    • (1988) Methods Enzymol , vol.264 , pp. 673-690
    • Sigmund, C.D.1    Ettayebi, M.2    Borden, A.3    Morgan, E.A.4
  • 36
    • 0002477677 scopus 로고
    • Isolation and characterization of ribosomes from prokaryotes, eukaryotes and organelles
    • Spedding G, ed. Oxford: Oxford University Press
    • Spedding G. 1990. Isolation and characterization of ribosomes from prokaryotes, eukaryotes and organelles. In: Spedding G, ed. Ribosomes and protein synthesis: A practical approach. Oxford: Oxford University Press, pp 1-27.
    • (1990) Ribosomes and Protein Synthesis: A Practical Approach , pp. 1-27
    • Spedding, G.1
  • 37
    • 0023767492 scopus 로고
    • Coregulation of processing and translation: Mature 5′ termini of Escherichia coli 23S ribosomal RNA form in polysomes
    • Srivastava AK, Schlessinger D. 1988. Coregulation of processing and translation: Mature 5′ termini of Escherichia coli 23S ribosomal RNA form in polysomes. Proc Natl Acad Sci USA 85:7144-7148.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 7144-7148
    • Srivastava, A.K.1    Schlessinger, D.2
  • 38
    • 0002754523 scopus 로고
    • rRNA processing in Escherichia coli
    • Hill WE, Dahlberg A, Garrett RA, Moore PB, Schlessinger D, Warner JR, eds. Washington, DC: American Society for Microbiology
    • Srivastava AK, Schlessinger D. 1990. rRNA processing in Escherichia coli. In: Hill WE, Dahlberg A, Garrett RA, Moore PB, Schlessinger D, Warner JR, eds. The ribosome: Structure, function, and evolution. Washington, DC: American Society for Microbiology, pp 413-416.
    • (1990) The Ribosome: Structure, Function, and Evolution , pp. 413-416
    • Srivastava, A.K.1    Schlessinger, D.2
  • 39
    • 0029402674 scopus 로고
    • Comparison of functional peptide encoded in the Escherichia coli 235 rRNA with other peptides involved in cis-regulation of translation
    • Tenson T, Mankin A. 1995. Comparison of functional peptide encoded in the Escherichia coli 235 rRNA with other peptides involved in cis-regulation of translation. Biochem Cell Biol 73:1061-1070.
    • (1995) Biochem Cell Biol , vol.73 , pp. 1061-1070
    • Tenson, T.1    Mankin, A.2
  • 40
    • 0027295667 scopus 로고
    • Analysis of the chloroplast large subunit ribosomal RNA gene from 17 Chlamydomonas taxa
    • Turmel M, Gutell RR, Mercier JP, Otis C, Lemieux C. 1993. Analysis of the chloroplast large subunit ribosomal RNA gene from 17 Chlamydomonas taxa. J. Mol Biol 232:446-467.
    • (1993) J. Mol Biol , vol.232 , pp. 446-467
    • Turmel, M.1    Gutell, R.R.2    Mercier, J.P.3    Otis, C.4    Lemieux, C.5
  • 41
    • 0242394646 scopus 로고    scopus 로고
    • Splicing and evolution of introns in ribosomal RNA
    • Green R, Schroeder R, eds. Austin, Texas: RG Landes
    • Woodson SA. 1996. Splicing and evolution of introns in ribosomal RNA. In: Green R, Schroeder R, eds. Group I introns and ribosomal RNA. Austin, Texas: RG Landes, pp. 199-219.
    • (1996) Group I Introns and Ribosomal RNA , pp. 199-219
    • Woodson, S.A.1
  • 42
    • 0025975586 scopus 로고
    • Alternative secondary structures in the 5′ exon affect both forward and reverse self-splicing of the Tetrahi/mena intervening sequence RNA
    • Woodson SA, Cech TR. 1991. Alternative secondary structures in the 5′ exon affect both forward and reverse self-splicing of the Tetrahi/mena intervening sequence RNA. Biochemistry 30:2042-2050.
    • (1991) Biochemistry , vol.30 , pp. 2042-2050
    • Woodson, S.A.1    Cech, T.R.2
  • 43
    • 0022975535 scopus 로고
    • The Tetrahymena intron acts like an RNA restriction endonuclease
    • Zaug AJ, Been MD, Cech TM. 1986. The Tetrahymena intron acts like an RNA restriction endonuclease. Nature 324:429-433.
    • (1986) Nature , vol.324 , pp. 429-433
    • Zaug, A.J.1    Been, M.D.2    Cech, T.M.3
  • 44
    • 0020673504 scopus 로고
    • Autocatalytic cyclization of an excised intervening sequence RNA is a cleavage-ligation reaction
    • Zaug AJ, Grabowski PJ, Cech TR. 1983. Autocatalytic cyclization of an excised intervening sequence RNA is a cleavage-ligation reaction. Nature 303:578-583.
    • (1983) Nature , vol.303 , pp. 578-583
    • Zaug, A.J.1    Grabowski, P.J.2    Cech, T.R.3
  • 45
    • 0029295846 scopus 로고
    • In vivo facilitation of Tetrahymena group I intron splicing in Escherichia coli pre-ribosomal RNA
    • Zhang F, Ramsay ES, Woodson SA. 1995. In vivo facilitation of Tetrahymena group I intron splicing in Escherichia coli pre-ribosomal RNA. RNA 1:284-292.
    • (1995) RNA , vol.1 , pp. 284-292
    • Zhang, F.1    Ramsay, E.S.2    Woodson, S.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.