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Volumn 168, Issue 2, 1997, Pages 92-101

Comparative genomic analysis of isolates belonging to the six species of the genus Thermus using pulsed-field gel electrophoresis and ribotyping

Author keywords

Genome size; Pulsed field gel electrophoresis; Restriction fragment length polymorphism; Ribotyping; Thermus

Indexed keywords

BACTERIAL DNA;

EID: 0030871982     PISSN: 03028933     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002030050474     Document Type: Article
Times cited : (8)

References (40)
  • 2
    • 0027455629 scopus 로고
    • Genomic restriction map of the extremely thermophilic bacterium Thermus thermophilus HB8
    • Borges KM, Bergquist PL (1993) Genomic restriction map of the extremely thermophilic bacterium Thermus thermophilus HB8. J Bacteriol 175:103-110
    • (1993) J Bacteriol , vol.175 , pp. 103-110
    • Borges, K.M.1    Bergquist, P.L.2
  • 3
    • 0014501198 scopus 로고
    • Thermus aquaticus gen. n. sp. n., a nonsporulating extreme thermophile
    • Brock TD, Freeze H (1969) Thermus aquaticus gen. n. sp. n., a nonsporulating extreme thermophile. J Bacteriol 98:289-297
    • (1969) J Bacteriol , vol.98 , pp. 289-297
    • Brock, T.D.1    Freeze, H.2
  • 4
    • 0017819827 scopus 로고
    • A comparative analysis of extreme thermophilic bacteria belonging to the genus Thermus
    • Degryse E, Glansdorff N, Pierard A (1978) A comparative analysis of extreme thermophilic bacteria belonging to the genus Thermus. Arch Microbiol 177:189-196
    • (1978) Arch Microbiol , vol.177 , pp. 189-196
    • Degryse, E.1    Glansdorff, N.2    Pierard, A.3
  • 5
    • 0027464646 scopus 로고
    • DNA:DNA homology and cellular components of Thermus filiformis and other strains of Thermus from New Zealand hot springs
    • Georganta G, Smith KE, Williams RAD (1993) DNA:DNA homology and cellular components of Thermus filiformis and other strains of Thermus from New Zealand hot springs. FEMS Microbiol. Lett. 107:145-150
    • (1993) FEMS Microbiol. Lett. , vol.107 , pp. 145-150
    • Georganta, G.1    Smith, K.E.2    Williams, R.A.D.3
  • 6
    • 0021223667 scopus 로고
    • Cloning and expression in Pseudomonas aeruginosa of a gene involved in the production of alginate
    • Goldberg JB, Ohman DE (1984) Cloning and expression in Pseudomonas aeruginosa of a gene involved in the production of alginate. J Bacteriol 158:1115-1121
    • (1984) J Bacteriol , vol.158 , pp. 1115-1121
    • Goldberg, J.B.1    Ohman, D.E.2
  • 7
    • 0023024708 scopus 로고
    • Ribosomal ribonucleic acid gene restriction patterns as potencial taxonomic tools
    • Grimont F, Grimont PAD (1986) Ribosomal ribonucleic acid gene restriction patterns as potencial taxonomic tools. Ann Inst Pasteur/Microbiol 137B:165-175
    • (1986) Ann Inst Pasteur/Microbiol , vol.137 B , pp. 165-175
    • Grimont, F.1    Grimont, P.A.D.2
  • 8
    • 0026046978 scopus 로고
    • New approaches in genome analysis by pulsed-field gel electrophoresis: Application to the analysis of Pseudomonas species
    • Grothues D, Tümmler B (1991) New approaches in genome analysis by pulsed-field gel electrophoresis: application to the analysis of Pseudomonas species. Mol Microbiol 5(11):2763-2776
    • (1991) Mol Microbiol , vol.5 , Issue.11 , pp. 2763-2776
    • Grothues, D.1    Tümmler, B.2
  • 9
    • 0017879665 scopus 로고
    • Isolation of extrachromosomal deoxyribonucleic acids from extremely thermophilic bacteria
    • Hishinuma F, Tanaka T, Sakaguchi K (1978) Isolation of extrachromosomal deoxyribonucleic acids from extremely thermophilic bacteria. J Gen Microbiol 104:193-199
    • (1978) J Gen Microbiol , vol.104 , pp. 193-199
    • Hishinuma, F.1    Tanaka, T.2    Sakaguchi, K.3
  • 10
    • 0023575491 scopus 로고
    • Thermus filiformis sp. nov., a filamentous caldoactive bacterium
    • Hudson JA, Morgan HW, Daniel RM (1987) Thermus filiformis sp. nov., a filamentous caldoactive bacterium. Int J Syst Bacteriol 37:431-436
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 431-436
    • Hudson, J.A.1    Morgan, H.W.2    Daniel, R.M.3
  • 11
    • 0001122580 scopus 로고
    • Numerical classification of Thermus isolates from globally distributed hot springs
    • Hudson JA, Morgan HW, Daniel RM (1989) Numerical classification of Thermus isolates from globally distributed hot springs. Syst Appl Microbiol 11:250-256
    • (1989) Syst Appl Microbiol , vol.11 , pp. 250-256
    • Hudson, J.A.1    Morgan, H.W.2    Daniel, R.M.3
  • 12
    • 0028287844 scopus 로고
    • Thermus scotoductus, sp. nov., a pigment-producing thermophilic bacterium from hot tap water in Iceland and including Thermus sp. X-1
    • Kristjansson JK, Hjörleifsdóttir S, Marteinsson VT, Alfredsson GA (1994) Thermus scotoductus, sp. nov., a pigment-producing thermophilic bacterium from hot tap water in Iceland and including Thermus sp. X-1. Syst Appl Microbiol 17:44-50
    • (1994) Syst Appl Microbiol , vol.17 , pp. 44-50
    • Kristjansson, J.K.1    Hjörleifsdóttir, S.2    Marteinsson, V.T.3    Alfredsson, G.A.4
  • 13
    • 0029895960 scopus 로고    scopus 로고
    • Ribotyping of Pseudomonas aeruginosa isolates from patients and water springs and genome fingerprinting of variants concerning mucoidy
    • Leitão JH, Alvim T, Sá-Correia I (1996) Ribotyping of Pseudomonas aeruginosa isolates from patients and water springs and genome fingerprinting of variants concerning mucoidy. FEMS Immun Med Microbiol 13:287-292
    • (1996) FEMS Immun Med Microbiol , vol.13 , pp. 287-292
    • Leitão, J.H.1    Alvim, T.2    Sá-Correia, I.3
  • 14
    • 0028792467 scopus 로고
    • Genome analysis of Clostridium botulinum type A by pulsed-field gel electrophoresis
    • Lin WJ, Johnson EA (1995) Genome analysis of Clostridium botulinum type A by pulsed-field gel electrophoresis. Appl Environ Microbiol 61:4441-4447
    • (1995) Appl Environ Microbiol , vol.61 , pp. 4441-4447
    • Lin, W.J.1    Johnson, E.A.2
  • 15
    • 0027205623 scopus 로고
    • Genome analysis of different Haloferax mediterranei strains using pulsed-field gel electrophoresis
    • López-Garcìa P, Abad JP, Amils R (1993) Genome analysis of different Haloferax mediterranei strains using pulsed-field gel electrophoresis. Syst Appl Microbiol 16:310-321
    • (1993) Syst Appl Microbiol , vol.16 , pp. 310-321
    • López-Garcìa, P.1    Abad, J.P.2    Amils, R.3
  • 16
    • 0028923953 scopus 로고
    • Halotolerant Thermus strains from marine and terrestrial hot springs belong to Thermus thermophilus (ex Oshima and Imahori, 1974) nom. rev. emend
    • Manaia CM, Hoste B, Gutierrez MC, Gillis M, Ventosa A, Kersters K, da Costa MS (1994) Halotolerant Thermus strains from marine and terrestrial hot springs belong to Thermus thermophilus (ex Oshima and Imahori, 1974) nom. rev. emend. Syst Appl Microbiol 17:526-532
    • (1994) Syst Appl Microbiol , vol.17 , pp. 526-532
    • Manaia, C.M.1    Hoste, B.2    Gutierrez, M.C.3    Gillis, M.4    Ventosa, A.5    Kersters, K.6    Da Costa, M.S.7
  • 17
    • 0029143274 scopus 로고
    • Plasmid RFLP profiling and DNA homology in Thermus isolated from hot springs of different geographical areas
    • Moreira LM, da Costa MS, Sá-Correia I (1995) Plasmid RFLP profiling and DNA homology in Thermus isolated from hot springs of different geographical areas. Arch Microbiol 164: 7-15
    • (1995) Arch Microbiol , vol.164 , pp. 7-15
    • Moreira, L.M.1    Da Costa, M.S.2    Sá-Correia, I.3
  • 19
    • 0022503208 scopus 로고
    • Isolation and preliminary taxonomic studies of Thermus strains isolated from Yellowstone National Park, USA
    • Munster MJ, Munster AP, Woodrow JR, Sharp RJ (1986) Isolation and preliminary taxonomic studies of Thermus strains isolated from Yellowstone National Park, USA. J Gen Microbiol 132: 1677-1683
    • (1986) J Gen Microbiol , vol.132 , pp. 1677-1683
    • Munster, M.J.1    Munster, A.P.2    Woodrow, J.R.3    Sharp, R.J.4
  • 21
    • 0024358063 scopus 로고
    • Chromosome map of the thermophilic archaebacterium Thermococcus celer
    • Noll KM (1989) Chromosome map of the thermophilic archaebacterium Thermococcus celer. J Bacteriol 171:6720-6725
    • (1989) J Bacteriol , vol.171 , pp. 6720-6725
    • Noll, K.M.1
  • 22
    • 0015955554 scopus 로고
    • Description of Thermus thermophilus (Yoshida and Oshima) comb. nov., a nonsporulating thermophilic bacterium from a japanese thermal spa
    • Oshima T, Imahori K (1974) Description of Thermus thermophilus (Yoshida and Oshima) comb. nov., a nonsporulating thermophilic bacterium from a japanese thermal spa. Int J Syst Bacteriol 24:102-112
    • (1974) Int J Syst Bacteriol , vol.24 , pp. 102-112
    • Oshima, T.1    Imahori, K.2
  • 23
    • 0016746617 scopus 로고
    • Extremely thermophilic Gram-negative bacteria from hot tap water
    • Pask-Hughes RA, Williams RAD (1975) Extremely thermophilic Gram-negative bacteria from hot tap water. J Gen Microbiol 88:321-328
    • (1975) J Gen Microbiol , vol.88 , pp. 321-328
    • Pask-Hughes, R.A.1    Williams, R.A.D.2
  • 24
    • 0017667616 scopus 로고
    • Yellow-pigmented strains of Thermus spp. from icelandic hot springs
    • Pask-Hughes RA, Williams RAD (1977) Yellow-pigmented strains of Thermus spp. from icelandic hot springs. J Gen Microbiol 102:375-383
    • (1977) J Gen Microbiol , vol.102 , pp. 375-383
    • Pask-Hughes, R.A.1    Williams, R.A.D.2
  • 25
    • 0011979675 scopus 로고
    • Isolation of non-pigmented, thermophilic bacterium similar to Thermus aquaticus
    • Ramaley RF, Hixson J (1970) Isolation of non-pigmented, thermophilic bacterium similar to Thermus aquaticus. J Bacteriol 103:527-528
    • (1970) J Bacteriol , vol.103 , pp. 527-528
    • Ramaley, R.F.1    Hixson, J.2
  • 26
    • 0028339335 scopus 로고
    • Pulsed-field gel electrophoresis of genomic digests of Thermus strains and its implications for taxonomic and evolutionary studies
    • Rodrigo AG, Borges KM, Bergquist PL (1994) Pulsed-field gel electrophoresis of genomic digests of Thermus strains and its implications for taxonomic and evolutionary studies. Int J Syst Bacteriol 44:547-552
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 547-552
    • Rodrigo, A.G.1    Borges, K.M.2    Bergquist, P.L.3
  • 27
    • 84996270670 scopus 로고
    • Isolation and characterization of extremely thermophilic bacteria from hot springs
    • Saiki T, Kimura R, Arima K (1972) Isolation and characterization of extremely thermophilic bacteria from hot springs. Agric Biol Chem 36:2357-2366
    • (1972) Agric Biol Chem , vol.36 , pp. 2357-2366
    • Saiki, T.1    Kimura, R.2    Arima, K.3
  • 29
    • 0024817092 scopus 로고
    • Numerical taxonomy of Thermus isolates from hot springs in Portugal
    • Santos MA, Williams RAD, da Costa MS (1989) Numerical taxonomy of Thermus isolates from hot springs in Portugal. Syst Appl Microbiol 12:310-315
    • (1989) Syst Appl Microbiol , vol.12 , pp. 310-315
    • Santos, M.A.1    Williams, R.A.D.2    Da Costa, M.S.3
  • 31
    • 0026667089 scopus 로고
    • Comparison of ribotyping and restriction enzyme analysis using pulsed-field gel electrophoresis for distinguishing Legionella pneumophila isolates obtained during a nosocomial outbreak
    • Schoonmaker D, Heimberger T, Birkhead G (1992) Comparison of ribotyping and restriction enzyme analysis using pulsed-field gel electrophoresis for distinguishing Legionella pneumophila isolates obtained during a nosocomial outbreak. J Clin Microbiol 30:1491-1498
    • (1992) J Clin Microbiol , vol.30 , pp. 1491-1498
    • Schoonmaker, D.1    Heimberger, T.2    Birkhead, G.3
  • 32
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
    • (1975) J Mol Biol , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 33
    • 0027443554 scopus 로고
    • Physical map of the extremely thermophilic bacterium Thermus thermophilus HB27 chromosome
    • Tabata K, Kosuge T, Nakahara T, Hoshino T (1993) Physical map of the extremely thermophilic bacterium Thermus thermophilus HB27 chromosome. FEBS Lett 331:81-85
    • (1993) FEBS Lett , vol.331 , pp. 81-85
    • Tabata, K.1    Kosuge, T.2    Nakahara, T.3    Hoshino, T.4
  • 34
    • 0028314529 scopus 로고
    • A carotenogenic gene cluster exists on a large plasmid in Thermus thermophilus
    • Tabata K, Ishida S, Nakahara T, Hoshino T (1994) A carotenogenic gene cluster exists on a large plasmid in Thermus thermophilus. FEBS Lett 341:251-255
    • (1994) FEBS Lett , vol.341 , pp. 251-255
    • Tabata, K.1    Ishida, S.2    Nakahara, T.3    Hoshino, T.4
  • 35
    • 0029134774 scopus 로고
    • Interpreting chromosomal DNA restriction patterns produced by pulsed field gel electrophoresis: Criteria for bacterial strain typing
    • Tenover FC, Arbeit RD, Goering RV, Mickelsen PA, Murray BE, Persing DN, Swaminathan B (1995) Interpreting chromosomal DNA restriction patterns produced by pulsed field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33:2233-2239
    • (1995) J Clin Microbiol , vol.33 , pp. 2233-2239
    • Tenover, F.C.1    Arbeit, R.D.2    Goering, R.V.3    Mickelsen, P.A.4    Murray, B.E.5    Persing, D.N.6    Swaminathan, B.7
  • 37
    • 0343268964 scopus 로고
    • Plasmid curing in Thermus thermophilus and Thermus flavus
    • Vásquez C, Villanueva J, Vicuña R (1983) Plasmid curing in Thermus thermophilus and Thermus flavus. FEBS Lett 158:339-342
    • (1983) FEBS Lett , vol.158 , pp. 339-342
    • Vásquez, C.1    Villanueva, J.2    Vicuña, R.3
  • 38
    • 0343312490 scopus 로고
    • Biochemical taxonomy of the genus Thermus
    • Da Costa MS, Duarte JC, Williams RAD (eds) Elsevier Applied Sciences, London
    • Williams RAD (1989) Biochemical taxonomy of the genus Thermus. In: Da Costa MS, Duarte JC, Williams RAD (eds) Microbiology of the extreme environments and its potencial for biotechnology. Elsevier Applied Sciences, London, pp 82-97
    • (1989) Microbiology of the Extreme Environments and Its Potencial for Biotechnology , pp. 82-97
    • Williams, R.A.D.1
  • 39
    • 0029052056 scopus 로고
    • DNA relatedness of Thermus strains, description of Thermus brockianus sp. nov., and proposal to reestablish Thermus thermophilus (Oshima and Imahori)
    • Williams RAD, Smith KE, Welch SG, Micallef J, Sharp RJ (1995) DNA relatedness of Thermus strains, description of Thermus brockianus sp. nov., and proposal to reestablish Thermus thermophilus (Oshima and Imahori). Int J Syst Bacteriol 45:495-499
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 495-499
    • Williams, R.A.D.1    Smith, K.E.2    Welch, S.G.3    Micallef, J.4    Sharp, R.J.5
  • 40
    • 0030008250 scopus 로고    scopus 로고
    • Thermus oshimai sp. nov., isolates from hot springs in Portugal, Iceland, and the Azores, and comment on the concept of a limited geographical distribution of Thermus species
    • Williams RAD, Smith KE, Welch SG, Micallef J (1996) Thermus oshimai sp. nov., isolates from hot springs in Portugal, Iceland, and the Azores, and comment on the concept of a limited geographical distribution of Thermus species. Int J Syst Bacteriol 46:403-408
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 403-408
    • Williams, R.A.D.1    Smith, K.E.2    Welch, S.G.3    Micallef, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.