메뉴 건너뛰기




Volumn 3, Issue 9, 1997, Pages 1028-1036

Photoaffinity labeling of 30S-subunit proteins S7 and S11 by 4-thiouridine-substituted tRNAPhe situated at the P site of Escherichia coli ribosomes

Author keywords

Photochemical crosslinking; Ribosome function; tRNA transcription

Indexed keywords

TRANSFER RNA;

EID: 0030865905     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (5)

References (30)
  • 1
  • 2
    • 0010549464 scopus 로고
    • Messenger RNA path through the procaryotic ribosome
    • Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds. New York: Plenum Press
    • Bogdanov AA, Dontsova OA, Brimacombe R. 1993. Messenger RNA path through the procaryotic ribosome. In: Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds. The translational apparatus: Structure, function, regulation, evolution. New York: Plenum Press, pp 421-431.
    • (1993) The Translational Apparatus: Structure, Function, Regulation, Evolution , pp. 421-431
    • Bogdanov, A.A.1    Dontsova, O.A.2    Brimacombe, R.3
  • 3
    • 0024274359 scopus 로고
    • Intra-RNA and RNA-protein cross-linking techniques in Escherichia coli ribosomes
    • Brimacombe R, Stiege W, Kyriatsoulis A, Maly P. 1988. Intra-RNA and RNA-protein cross-linking techniques in Escherichia coli ribosomes. Methods Enzymol 164:287-309.
    • (1988) Methods Enzymol , vol.164 , pp. 287-309
    • Brimacombe, R.1    Stiege, W.2    Kyriatsoulis, A.3    Maly, P.4
  • 4
    • 0028284844 scopus 로고
    • The decoding region of 16S RNA: A cross-linking study of the ribosomal A, P and E sites using tRNA derivatized at position 32 in the anticodon loop
    • Döring T, Mitchell P, Osswald M, Bochkariov D, Brimacombe R. 1994. The decoding region of 16S RNA: A cross-linking study of the ribosomal A, P and E sites using tRNA derivatized at position 32 in the anticodon loop. EMBO J 13:2677-2685.
    • (1994) EMBO J , vol.13 , pp. 2677-2685
    • Döring, T.1    Mitchell, P.2    Osswald, M.3    Bochkariov, D.4    Brimacombe, R.5
  • 5
    • 0021239982 scopus 로고
    • High resolution localization of the tRNA anticodon interaction site on the Escherichia 30S ribosomal subunit
    • Gornicki P, Nurse K, Hellmann W, Boublik M, Ofengand J. 1984. High resolution localization of the tRNA anticodon interaction site on the Escherichia 30S ribosomal subunit. J. Biol Chem 259:10493-10498.
    • (1984) J. Biol Chem , vol.259 , pp. 10493-10498
    • Gornicki, P.1    Nurse, K.2    Hellmann, W.3    Boublik, M.4    Ofengand, J.5
  • 6
    • 0024284020 scopus 로고
    • RNA-protein cross-linking in Escherichia coli 50S ribosomal subunits: Determination of sites on 23S RNA that are cross-linked to proteins L2, L4, L24 and L27 by treatment with 2-iminothiolane
    • Gulle H, Hoppe E, Osswald M, Greuer B, Brimacombe R, Stoffler G. 1988. RNA-protein cross-linking in Escherichia coli 50S ribosomal subunits: Determination of sites on 23S RNA that are cross-linked to proteins L2, L4, L24 and L27 by treatment with 2-iminothiolane. Nucleic Acids Res 16:815-832.
    • (1988) Nucleic Acids Res , vol.16 , pp. 815-832
    • Gulle, H.1    Hoppe, E.2    Osswald, M.3    Greuer, B.4    Brimacombe, R.5    Stoffler, G.6
  • 7
    • 0019875918 scopus 로고
    • Mechanism of codon-anticodon interaction in ribosomes
    • Kirillov SV, Katunin VI, Semenkov YuP. 1981. Mechanism of codon-anticodon interaction in ribosomes. FEBS Lett 125:15-19.
    • (1981) FEBS Lett , vol.125 , pp. 15-19
    • Kirillov, S.V.1    Katunin, V.I.2    Semenkov, Yu.P.3
  • 8
    • 0020446681 scopus 로고
    • Phe interaction with the donor and acceptor sites of Escherichia coli ribosomes
    • Phe interaction with the donor and acceptor sites of Escherichia coli ribosomes. FEBS Lett 148:235-238.
    • (1982) FEBS Lett , vol.148 , pp. 235-238
    • Kirillov, S.V.1    Semenkov, Yu.P.2
  • 9
    • 0023651444 scopus 로고
    • Oligo-ribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
    • Milligan JF, Groebe DR, Witherill GW, Uhlenbeck OC. 1987. Oligo-ribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res 15:8783-8798.
    • (1987) Nucleic Acids Res , vol.15 , pp. 8783-8798
    • Milligan, J.F.1    Groebe, D.R.2    Witherill, G.W.3    Uhlenbeck, O.C.4
  • 10
    • 0002201868 scopus 로고
    • Ribosome structure, functional and evolution: Mapping nbosomal RNA, proteins, and fuctional sites in three dimensions
    • Hardesty B, Kramer G, eds. New York: Springer-Verlag
    • Oakes M, Henderson E, Scheinman A, Clark M, Lake JA. 1986. Ribosome structure, functional and evolution: Mapping nbosomal RNA, proteins, and fuctional sites in three dimensions. In: Hardesty B, Kramer G, eds. Structure, function and genetics of ribosomes. New York: Springer-Verlag. pp 47-67.
    • (1986) Structure, Function and Genetics of Ribosomes , pp. 47-67
    • Oakes, M.1    Henderson, E.2    Scheinman, A.3    Clark, M.4    Lake, J.A.5
  • 11
    • 0026482716 scopus 로고
    • Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase
    • Peterson ET, Uhlenbeck OC. 1992. Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase. Biochemistry 31:10380-10389.
    • (1992) Biochemistry , vol.31 , pp. 10380-10389
    • Peterson, E.T.1    Uhlenbeck, O.C.2
  • 12
    • 0026073648 scopus 로고
    • Neighbourhood of the central fold of the tRNA molecule bound to the E. coli ribosome-affinity labeling studies with modified rRNAs carrying photoreactive probes attached to the dihydrouridine loop
    • Podkowinski J, Gornicki P. 1991. Neighbourhood of the central fold of the tRNA molecule bound to the E. coli ribosome-affinity labeling studies with modified rRNAs carrying photoreactive probes attached to the dihydrouridine loop. Nucleic Acids Res 19:801-808.
    • (1991) Nucleic Acids Res , vol.19 , pp. 801-808
    • Podkowinski, J.1    Gornicki, P.2
  • 13
  • 15
    • 0029444686 scopus 로고
    • The ribosomal environment of tRNA: Crosslinks to rRNA from positions 8 and 20:1 in the central fold of tRNA located at the A,P, or e site
    • Rinke-Apple J, Jünke N, Osswald M, Brimacombe R. 1995. The ribosomal environment of tRNA: Crosslinks to rRNA from positions 8 and 20:1 in the central fold of tRNA located at the A,P, or E site. RNA 1:1018-1028.
    • (1995) RNA , vol.1 , pp. 1018-1028
    • Rinke-Apple, J.1    Jünke, N.2    Osswald, M.3    Brimacombe, R.4
  • 18
    • 0010542882 scopus 로고
    • Kristall- und Molekulstruktur von 2,4-dithiouridin-monohydrat
    • Saenger W, Suck D. 1971. Kristall- und Molekulstruktur von 2,4-dithiouridin-monohydrat. Acta Crystallogr B 27:1178-1186.
    • (1971) Acta Crystallogr B , vol.27 , pp. 1178-1186
    • Saenger, W.1    Suck, D.2
  • 20
    • 0016268473 scopus 로고
    • Photo-affinity labeling of tRNA binding sites in macromolecules. I. Linking of the phenyl-p-azide of 4-thiouridine in (Esclierichia coli) valyl-tRNA to 165 RNA at the ribosomal P site
    • Schwartz I, Ofengand J. 1974. Photo-affinity labeling of tRNA binding sites in macromolecules. I. Linking of the phenyl-p-azide of 4-thiouridine in (Esclierichia coli) valyl-tRNA to 165 RNA at the ribosomal P site. Proc Natl Acad Sci USA 71:3951-3955
    • (1974) Proc Natl Acad Sci USA , vol.71 , pp. 3951-3955
    • Schwartz, I.1    Ofengand, J.2
  • 21
    • 0024785660 scopus 로고
    • Site-directed cross-linking of mRNA analogues to the Escherichia coli ribosome: Identification of 30S ribosomal components that can be cross-linked to the mRNA at various points 5′ with respect to the decoding site
    • Stade K, Rinke-Appel J, Brimacombe R. 1989. Site-directed cross-linking of mRNA analogues to the Escherichia coli ribosome: Identification of 30S ribosomal components that can be cross-linked to the mRNA at various points 5′ with respect to the decoding site. Nucleic Acids Res 27:9889-9908.
    • (1989) Nucleic Acids Res , vol.27 , pp. 9889-9908
    • Stade, K.1    Rinke-Appel, J.2    Brimacombe, R.3
  • 22
    • 0002440518 scopus 로고
    • Immuno electron microscopy on Escherichia coli ribosomes
    • Hardesty B, Kramer G, eds. New York: Springer-Verlag
    • Stöffier G, Stöffler-Meilicke M. 1986. Immuno electron microscopy on Escherichia coli ribosomes. In: Hardesty B, Kramer G, eds. Structure, function and genetics of ribosomes. New York: Springer-Verlag, pp 28-46.
    • (1986) Structure, Function and Genetics of Ribosomes , pp. 28-46
    • Stöffier, G.1    Stöffler-Meilicke, M.2
  • 24
    • 0004849635 scopus 로고
    • Protein topography of ribosomal functional domains: Effects of monoclonal antibodies to different epitopes in Escherichia coli protein L7/L12 on ribosome structure and function
    • Hardesty B, Kramer G, eds. New York: Springer-Verlag
    • Traut RR, Tewari DS, Sommer A, Gavino GR, Olson HM, Glitz DG. 1986. Protein topography of ribosomal functional domains: Effects of monoclonal antibodies to different epitopes in Escherichia coli protein L7/L12 on ribosome structure and function. In: Hardesty B, Kramer G, eds. Structure, function and genetics of ribosome. New York: Springer-Verlag, pp 286-308.
    • (1986) Structure, Function and Genetics of Ribosome , pp. 286-308
    • Traut, R.R.1    Tewari, D.S.2    Sommer, A.3    Gavino, G.R.4    Olson, H.M.5    Glitz, D.G.6
  • 25
    • 0024331948 scopus 로고
    • The solution structure of the Escherichia coli initiator tRNA and its interactions with initiation factor 2 and the ribosomal 30S subunit
    • Wakao H, Romby P, Westhof E, Laalami S, Grunberg-Manago M, Ebel JP, Ehresmann C, Ehresmann B. 1989. The solution structure of the Escherichia coli initiator tRNA and its interactions with initiation factor 2 and the ribosomal 30S subunit J Biol Chem 264:20363-20371.
    • (1989) J Biol Chem , vol.264 , pp. 20363-20371
    • Wakao, H.1    Romby, P.2    Westhof, E.3    Laalami, S.4    Grunberg-Manago, M.5    Ebel, J.P.6    Ehresmann, C.7    Ehresmann, B.8
  • 26
    • 0018369608 scopus 로고
    • Enzymatic binding of aminoacyl-tRNA to Escherichia coli ribosomes using modified tRNA species and tRNA fragments
    • Wagner T, Sprinzl M. 1979. Enzymatic binding of aminoacyl-tRNA to Escherichia coli ribosomes using modified tRNA species and tRNA fragments. Methods Enzymol 60:615-628.
    • (1979) Methods Enzymol , vol.60 , pp. 615-628
    • Wagner, T.1    Sprinzl, M.2
  • 28
    • 0025125058 scopus 로고
    • Probing tRNA binding sites on the Escherichia coli 30S ribosomal subunit with photoreactive analogs of the anticodon arm
    • Wower J, Malloy TA IV, Hixson SS, Zimmermann RA. 1990. Probing tRNA binding sites on the Escherichia coli 30S ribosomal subunit with photoreactive analogs of the anticodon arm. Biochim Biophys Acta 100:38-44.
    • (1990) Biochim Biophys Acta , vol.100 , pp. 38-44
    • Wower, J.1    Malloy IV, T.A.2    Hixson, S.S.3    Zimmermann, R.A.4
  • 30
    • 0002344009 scopus 로고
    • A model of the tRNA binding sites on the Escherichia coli ribosome
    • Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds. New York: Plenum Press
    • Wower J, Sylvers LA, Rosen KV, Hixson SS, Zimmermann RA. 1993b. A model of the tRNA binding sites on the Escherichia coli ribosome. In: Nierhaus KH, Franceschi F, Subramanian AR, Erdmann VA, Wittmann-Liebold B, eds. The translational apparatus: Structure, function, regulation, evolution. New York: Plenum Press. pp 455-464.
    • (1993) The Translational Apparatus: Structure, Function, Regulation, Evolution , pp. 455-464
    • Wower, J.1    Sylvers, L.A.2    Rosen, K.V.3    Hixson, S.S.4    Zimmermann, R.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.