A population 'consensus', partial linkage map of Picea abies Karst. based on RAPD markers

Theoretical and Applied Genetics

Volumn 95, Issue 4, 1997, Pages 643-654

  Bucci, G ^a,c   Kubisiak, T L ^b   Nance, W L ^b   Menozzi, P ^a  

^a UNIVERSITY OF PARMA   (Italy)

^b USDA FOREST SERVICE   (United States)

^c Ist Miglioramento Genetico Delle P   (Italy)

Author keywords

Genomic arrangements; Genomic co linearity; Integrated map; Log likelihood; Norway spruce

Indexed keywords

PICEA ABIES;

EID: 0030864206     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050607     Document Type: Article

References (59)

1. Adams WT, Joly RJ (1980) Linkage relationships among twelve allozyme loci in loblolly pine. J Hered 71:199-202
2. Barrett JW, Cheliak WM, Knowles PH (1987) Variation in the PGI/AAT linkage group between populations of black spruce. Can J For Res 17:756-758
3. Beavis WD, Grant D (1991) A linkage map based on information from four F2 populations of maize (Zea mays L). Theor Appl Genet 82:636-644
4. Bennetzen JL, Freeling M (1993) Grasses as a single genetic system: genome composition, co-linearity and compatibility. Trends Genet 9:259-261
5. Binelli G, Bucci G (1994) A genetic linkage map of Picea abies Karst, based on RAPD markers as a tool in population genetics. Theor Appl Genet 88:283-288
6. Bradshaw HD Jr, Stettler RF (1995) Molecular genetics of growth and development in Populus . IV. Mapping QTLs with large effects on growth, form and phenology traits in a forest tree. Genetics 139:963-973
7. Bradshaw HD Jr, Wilbert SM, Otto KG, Schemske DW (1995) Genetic mapping of floral traits associated with reproductive isolation in monkeyflowers (Mimulus). Nature 376:762-765
8. Brondani RPV, Grattapaglia D (1996a) Comparative mapping in Eucalyptus reveals significant RAPD locus linkage and order conservation between trees and greater meiotic recombination in females. Plant Genome IV Meeting, S.Diego, January 11-18. Poster #235
9. Brondani RPV, Grattapaglia D (1996b) Mapped RAPD markers are transferable among Eucalyptus trees from the same population. Plant Genome IV Meeting, S.Diego, January 11-18, Poster #236
10. Bucci G, Binelli G, Menozzi P (1995) Identification of a new set of molecular markers in Picea abies Karst, as revealed by random amplification techniques. In: Baradat P, Muller-Stark G, Adams WT (eds) Population genetics and gene conservation of forest trees. SPB Academic Publishing bv, The Hague, The Netherlands, pp 121-127
11. Bucci G, Menozzi P (1995) Genetic variation of RAPD markers in a Picea abies Karst, population. Heredity 75:188-197
12. Burr B, Burr FA, Thompson KH, Albertsen MC. Stuber C (1988) Gene mapping with recombinant inbreds in maize. Genetics 118:519-526
13. Conkle MT (1981) Isozyme variation and linkage in six conifer species. In: Conkle MT (ed) Proceedings of the Symposium on Isozyme of North American Forest Trees and Forest Insects. USDA For Serv Gen Tech Rep, PSW-48, pp 11-17
14. Cooperative Human Linkage Center-CHLC(1994) A comprehensive human linkage map with centimorgan density. Science 265:2049-2054
15. Duhram RE, Liou PC, Gmitter FG Jr, Moore GA (1992) Linkage of restriction fragment length polymorphisms and isozymes in Citrus . Theor Appl Genet 84:39-48
16. Efron B (1982) The jacknife, the bootstrap and other re-sampling plans. In: Applied Mathematics, #38, CBMS-NSF Regional Conference Series. Society for Industrial and Applied Mathematics, Philadelphia, USA
17. Ellis THN (1994) Estimating map distances. Trends Genet 10: 113-114
18. Ellis THN, Turner L, Hellens RP, Lee D, Harker CL, Enard C, Domoney C, Davies DR (1992) Linkage maps in pea. Genetics 130:649-663
19. Fritsch P, Rieseberg LH (1992) High outcrossing rates maintain male and hermaphrodite individuals in populations of the flowering plant Dactylis glomerata . Nature 359:633-636
20. Furnier GR, Knowles P, Aleksiuk MA, Dancik BP (1986) Inheritance and linkage of allozymes in seed tissue of whitebark pine. Can J Genet Cytol 28:601-604
21. Geburek T, von Wuehlisch G (1989) Linkage analysis of isozyme gene loci in Picea abies Karst. Heredity 62:185-191
22. 2 tests in a linkage study of maritime pine (Pinus pinaster Ait.). Theor Appl Genet 88:293-297
23. Gerber S, Rodolphe F, Bahrman N, Baradat P (1993) Seed-protein variation in maritime pine (Pinus pinaster Ait.) revealed by two-dimensional electrophoresis: genetic determinism and construction of a linkage map. Theor Appl Genet 85:521-528
24. Graner A, Jahoor A, Schoendelmaier J, Siedler H, Pillen H, Fischbeck G, Wenzel G, Herrmann RG (1991) Construction of an RFLP map in barley. Theor Appl Genet 83:250-256
25. Grattapaglia D, Sederoff R (1994) Genetic linkage map of Eucalyptus grandis and Eucalyptus urophylla using a pseudotestcross: mapping strategy and RAPD markers. Genetics 137:1121-1137
26. Hauge BM, Hanley SM, Cartinhour S, Cherry JM, Goodman HM, Koorrneef M, Stam P, Chang C, Kempin S, Medrano L, Meyerowitz EM (1993) An integrated genetic/RFLP map of the Arabidopsis thaliana genome. Plant J 3:745-754
27. Kaga A, Ohnishi M, Ishii T, Kamijima O (1996) A genetic linkage map of azuki bean constructed with molecular and morphological markers using an interspecific population (Vigna unguicularis × v. nakashimae). Theor Appl Genet 93:658-663
28. Kianian SF, Quiros CF (1992) Generation of a Brassica oleracea composite RFLP map: linkage arrangements among various populations and evolutionary implications. Theor Appl Genet 84:544-554
29. King JN, Dancik BP (1983) Inheritance and linkage of isozymes in white spruce. Can J Genet Cytol 25:430-436
30. 1 family. Theor Appl Genet 90:1119-1127
31. Lander ES, Green P (1987) Construction of multilocus genetic linkage maps in humans. Proc Natl Acad Sci USA 84:2363-2367
32. Lander ES, Green P, Abrahamson J, A. Barlow, M. Daly, S. Lincoln L. Newburg (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181
33. Lathrop GM, Lalouel M, Julier C, Ott J (1984) Strategies for multilocus linkage analysis in humans. Proc Natl Acad Sci USA 81:3443-3446
34. Liu B (1996) Framework map and confidence of gene order. SRIEG Conference: Novel Applications of Molecular Markers, Texas A&M University, IBT, Houston, June 23-26
35. Lu M-Z, Szmidt AE, Wang X-R (1995) Inheritance of RAPD fragments in haploid and diploid tissues of Pinus sylvestris (L.). Heredity 74:582-589
36. Mitchell-Olds T (1995) The molecular basis of quantitative variation in natural populations. Trends Ecol Evol 10:324-328
37. Morton NE (1955). Sequential tests for the detection of linkage. Am J Hum Genet 7:277-318
38. Nelson CD, Nance WL, Doudrick RL (1993) A partial genetic linkage map of slash pine (Pinus elliottii Englm. var. elliottii) based on random amplified polymorphic DNAs. Theor Appl Genet 87:145-151
39. NIH/CEPH Collaborative Mapping Group (1992) A comprehensive genetic linkage map of the human genome. Nature 258:67-86
40. O'Malley DM, Guries RP, Nordheim EV (1986) Linkage analysis for 18 enzyme loci in Pinus rigida Mill. Theor Appl Genet 72: 530-535
41. Ott J (1991) Analysis of human genetic linkage (revised edition). John Hopkins University Press, Baltimore
42. Plomion C, O'Malley DM (1996) Recombination rate differences for pollen and seed parents in Pinus pinaster . Heredity 77:341-350
43. Plomion C, Bahrman N, Durel C-E, O'Malley DM (1995a) Genomic mapping in Pinus pinaster (maritime pine) using RAPD and protein markers. Heredity 74:661-668
44. Plomion C, O'Malley DM, Durel C-E (1995b) Genomic analysis in Maritime pine (Pinus pinaster). Comparison of two RAPD maps using selfed and open-pollinated seeds from the same individual. Theor Appl Genet 90:1028-1034
45. Reiter RS, Williams JGK, Feldmann KA, Rafalski JA, Tingey SV, Scolnik PA (1992). Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs. Proc Natl Acad Sci USA 89:1477-1481
46. Rieseberg LH (1996) Homology among RAPD fragments in inter-specific comparisons. Mol Ecol 5:99-105
47. Rieseberg LH, Van Fossen C, Desrochers AM (1995) Hybrid speciation accompanied by genomic reorganization in wild sunflowers. Nature 375:313-316
48. Rieseberg LH, Sinervo B, Linder CR, Ungerer MC, Arias DM (1996) Role of gene interactions in hybrid speciation: evidence from ancient and experimental hybrids. Science 272:741-745
49. Rudin D, Eckberg I (1978) Linkage studies in Pinus sylvestris L. using macrogametophyte allozymes. Silvae Genet 27:1-12
50. Slocum MK, Figdor SS, Kennard WC, Suzuki JI, Osborn TC (1990) Linkage arrangements of restriction length polymorphism loci in Brassica oleracea . Theor Appl Genet 80:57-64
51. Stam P (1993) Construction of integrated genetic linkage maps by means of a new computer package: JoinMap. Plant J 3:739-744
52. Strauss SH, Conkle MT (1986) Segregation, linkage and diversity of allozymes in knobcone pine. Theor Appl Genet 72:483-493
53. Suther GK (1991) Estimation of an approximate confidence interval for FRAXA location by using linkage data from many pedigrees. Am J Hum Genet 49:462-464
54. Suther GK, Wilson SR (1990) Genetic counseling in rare syndromes: a re-sampling method for determining an approximate confidence interval for gene location with linkage data from single pedigree. Am J Hum Genet 47:53-61
55. Szmidt AE, Muona O (1989) Linkage relationships of allozyme loci in Pinus sylvestris. Hereditas 111:91-97
56. Tanksley SD (1993) Mapping polygenes. Annu Rev Genet 27:205-233
57. Tanksley SD, Ganal MW, Prince JP, de Vicente MC, Bonierbale MW, Broun P, Fulton TM, Giovannoni JJ et al. (1992) Highdensity molecular linkage maps of the tomato and potato genome. Genetics 132:1141-1160
58. Weir BS (1990) Genetic Data Analysis. Sinauer Associates, Inc. Publishers, Sunderland, Mississippi
59. Weissebach J, Gyapay G, Dib C, Vignal A, Morisette J, Millasseau P, Vaysseix G, Lathrop GM (1992) A second generation linkage map of the human genome. Nature 359: 794-801