메뉴 건너뛰기




Volumn 179, Issue 16, 1997, Pages 5148-5156

The resolvase/invertase domain of the site-specific recombinase TnpX is functional and recognizes a target sequence that resembles the junction of the circular form of the Clostridium perfringens transposon Tn4451

Author keywords

[No Author keywords available]

Indexed keywords

RECOMBINASE;

EID: 0030854115     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.179.16.5148-5156.1997     Document Type: Article
Times cited : (39)

References (51)
  • 2
    • 0023212832 scopus 로고
    • Identification of Tn4451 and Tn4452, chloramphenicol resistance transposons from Clostridium perfringens
    • Abraham, L. J., and J. I. Rood. 1987. Identification of Tn4451 and Tn4452, chloramphenicol resistance transposons from Clostridium perfringens. J. Bacteriol. 169:1579-1584.
    • (1987) J. Bacteriol. , vol.169 , pp. 1579-1584
    • Abraham, L.J.1    Rood, J.I.2
  • 3
    • 0023750277 scopus 로고
    • The Clostridium perfringens chloramphenicol resistance transposon Tn4451 excises precisely in Escherichia coli
    • Abraham, L. J., and J. I. Rood. 1988. The Clostridium perfringens chloramphenicol resistance transposon Tn4451 excises precisely in Escherichia coli. Plasmid 19:164-168.
    • (1988) Plasmid , vol.19 , pp. 164-168
    • Abraham, L.J.1    Rood, J.I.2
  • 4
    • 0022259330 scopus 로고
    • Worldwide distribution of the conjugative Clostridium perfringens tetracycline resistance plasmid, pCW3
    • Abraham, L. J., A. J. Wales, and J. I. Rood. 1985. Worldwide distribution of the conjugative Clostridium perfringens tetracycline resistance plasmid, pCW3. Plasmid 14:37-46.
    • (1985) Plasmid , vol.14 , pp. 37-46
    • Abraham, L.J.1    Wales, A.J.2    Rood, J.I.3
  • 5
    • 0026586392 scopus 로고
    • Evidence for a second conserved arginine residue in the integrase family of recombination proteins
    • Abremski, K. E., and R. H. Hoess. 1992. Evidence for a second conserved arginine residue in the integrase family of recombination proteins. Protein Eng. 5:87-91.
    • (1992) Protein Eng. , vol.5 , pp. 87-91
    • Abremski, K.E.1    Hoess, R.H.2
  • 6
    • 0030586719 scopus 로고    scopus 로고
    • Site-specific recombination in gram-positive theta-replicating plasmids
    • Alonso, J. C., S. Ayora, I. Canosa, F. Weise, and F. Rojo. 1996. Site-specific recombination in gram-positive theta-replicating plasmids. FEMS Microbiol. Lett. 142:1-10.
    • (1996) FEMS Microbiol. Lett. , vol.142 , pp. 1-10
    • Alonso, J.C.1    Ayora, S.2    Canosa, I.3    Weise, F.4    Rojo, F.5
  • 8
    • 85036482566 scopus 로고    scopus 로고
    • Bannam, T. L., and J. I. Rood. Unpublished results
    • Bannam, T. L., and J. I. Rood. Unpublished results.
  • 9
    • 0028998170 scopus 로고
    • Molecular genetics of the chloramphenicol-resistance transposon Tn4451 from Clostridium perfringens: The TnpX site-specific recombinase excises a circular transposon molecule
    • Bannam, T. L., P. K. Crellin, and J. I. Rood. 1995. Molecular genetics of the chloramphenicol-resistance transposon Tn4451 from Clostridium perfringens: the TnpX site-specific recombinase excises a circular transposon molecule. Mol. Microbiol. 16:535-551.
    • (1995) Mol. Microbiol. , vol.16 , pp. 535-551
    • Bannam, T.L.1    Crellin, P.K.2    Rood, J.I.3
  • 10
    • 0025778670 scopus 로고
    • Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives
    • Bartolomé, B., Y. Jubete, E. Martinez, and F. de la Cruz. 1991. Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives. Gene 102:75-78.
    • (1991) Gene , vol.102 , pp. 75-78
    • Bartolomé, B.1    Jubete, Y.2    Martinez, E.3    De La Cruz, F.4
  • 11
    • 0028123529 scopus 로고
    • Anabaena xisF gene encodes a developmentally regulated site-specific recombinase
    • Carrasco, C. D., K. S. Ramaswamy, T. S. Ramasubramanian, and J. W. Golden. 1994. Anabaena xisF gene encodes a developmentally regulated site-specific recombinase. Genes Dev. 8:74-83.
    • (1994) Genes Dev. , vol.8 , pp. 74-83
    • Carrasco, C.D.1    Ramaswamy, K.S.2    Ramasubramanian, T.S.3    Golden, J.W.4
  • 12
    • 0015402376 scopus 로고
    • Trimethoprim resistance conferred by W plasmids in Enterobacteriaceae
    • Datta, N., and R. W. Hedges. 1972. Trimethoprim resistance conferred by W plasmids in Enterobacteriaceae. J. Gen. Microbiol. 72:349-355.
    • (1972) J. Gen. Microbiol. , vol.72 , pp. 349-355
    • Datta, N.1    Hedges, R.W.2
  • 13
    • 0026601458 scopus 로고
    • Site-directed mutagenesis of virtually any plasmid by eliminating a unique site
    • Deng, W. P., and J. A. Nickoloff. 1992. Site-directed mutagenesis of virtually any plasmid by eliminating a unique site. Anal. Biochem. 200:81-88.
    • (1992) Anal. Biochem. , vol.200 , pp. 81-88
    • Deng, W.P.1    Nickoloff, J.A.2
  • 15
    • 0023682818 scopus 로고
    • Complete nucleotide sequence and genetic organization of the bacteriocinogenic plasmid, pIP404, from Clostridium perfringens
    • Garnier, T., and S. T. Cole. 1988. Complete nucleotide sequence and genetic organization of the bacteriocinogenic plasmid, pIP404, from Clostridium perfringens. Plasmid 19:134-150.
    • (1988) Plasmid , vol.19 , pp. 134-150
    • Garnier, T.1    Cole, S.T.2
  • 16
    • 0000239937 scopus 로고
    • Bacterial DNA inversion systems
    • D. E. Berg and M. M. Howe (ed.), American Society for Microbiology, Washington, D.C.
    • Glasgow, A. C., K. T. Hughes, and M. I. Simon. 1989. Bacterial DNA inversion systems, p. 637-659. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
    • (1989) Mobile DNA , pp. 637-659
    • Glasgow, A.C.1    Hughes, K.T.2    Simon, M.I.3
  • 17
    • 0024489214 scopus 로고
    • A mutational analysis of the bacteriophage P1 cin recombinase gene: Intragenic complementation
    • Haffter, P., T. Pripfl, and T. A. Bickle. 1989. A mutational analysis of the bacteriophage P1 cin recombinase gene: intragenic complementation. Mol. Gen. Genet. 215:245-249.
    • (1989) Mol. Gen. Genet. , vol.215 , pp. 245-249
    • Haffter, P.1    Pripfl, T.2    Bickle, T.A.3
  • 18
    • 0022452755 scopus 로고
    • Analysis of γδ resolvase mutants in vitro: Evidence for an interaction between serine-10 of resolvase and site I of res
    • Hatfull, G. F., and N. D. F. Grindley. 1986. Analysis of γδ resolvase mutants in vitro: evidence for an interaction between serine-10 of resolvase and site I of res. Proc. Natl. Acad. Sci. USA 83:5429-5433.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 5429-5433
    • Hatfull, G.F.1    Grindley, N.D.F.2
  • 19
    • 0002549697 scopus 로고
    • Resolvases and DNA invertases: A family of enzymes active in site-specific recombination
    • R. Kucherlapati and G. Smith (ed.), American Society for Microbiology, Washington, D.C.
    • Hatfull, G. F., and N. D. F. Grindley. 1988. Resolvases and DNA invertases: a family of enzymes active in site-specific recombination, p. 357-396. In R. Kucherlapati and G. Smith (ed.), Genetic recombination. American Society for Microbiology, Washington, D.C.
    • (1988) Genetic Recombination , pp. 357-396
    • Hatfull, G.F.1    Grindley, N.D.F.2
  • 20
    • 0018630462 scopus 로고
    • DNA sequence analysis of the transposon Tn3: Three genes and three sites involved in transposition of Tn3
    • Heffron, F., B. J. McCarthy, H. Ohtsubo, and E. Ohtsubo. 1979. DNA sequence analysis of the transposon Tn3: three genes and three sites involved in transposition of Tn3. Cell 18:1153-1163.
    • (1979) Cell , vol.18 , pp. 1153-1163
    • Heffron, F.1    McCarthy, B.J.2    Ohtsubo, H.3    Ohtsubo, E.4
  • 21
    • 0021010811 scopus 로고
    • Sequence of the site-specific recombinase gene cin and of its substrates serving in the inversion of the C segment of bacteriophage P1
    • Hiestand-Nauer, R., and S. Iida. 1983. Sequence of the site-specific recombinase gene cin and of its substrates serving in the inversion of the C segment of bacteriophage P1. EMBO J. 2:1733-1740.
    • (1983) EMBO J. , vol.2 , pp. 1733-1740
    • Hiestand-Nauer, R.1    Iida, S.2
  • 22
    • 0025639159 scopus 로고
    • Cooperativity mutants of the γδ resolvase identify an essential interdimer interaction
    • Hughes, R. E., G. F. Hatfull, P. Rice, T. A. Steitz, and N. D. F. Grindley. 1990. Cooperativity mutants of the γδ resolvase identify an essential interdimer interaction. Cell 63:1331-1338.
    • (1990) Cell , vol.63 , pp. 1331-1338
    • Hughes, R.E.1    Hatfull, G.F.2    Rice, P.3    Steitz, T.A.4    Grindley, N.D.F.5
  • 24
    • 0017836862 scopus 로고
    • Inversion of the G-segment of phage Mu controls phage infectivity
    • Kamp, D., R. Kahmann, D. Zipser, T. R. Broker, and L. T. Chow. 1978. Inversion of the G-segment of phage Mu controls phage infectivity. Nature 271:577-580.
    • (1978) Nature , vol.271 , pp. 577-580
    • Kamp, D.1    Kahmann, R.2    Zipser, D.3    Broker, T.R.4    Chow, L.T.5
  • 25
    • 0025219230 scopus 로고
    • k is generated by excision of a dispensible DNA element containing a sporulation recombinase gene
    • k is generated by excision of a dispensible DNA element containing a sporulation recombinase gene. Genes Dev. 4:525-535.
    • (1990) Genes Dev. , vol.4 , pp. 525-535
    • Kunkel, B.1    Losick, R.2    Stragier, P.3
  • 26
    • 0028908207 scopus 로고
    • The tyrosine-6 hydroxyl of γδ resolvase is not required for the DNA cleavage and rejoining reactions
    • Leschziner, A. E., M. R. Boocock, and N. D. F. Grindley. 1995. The tyrosine-6 hydroxyl of γδ resolvase is not required for the DNA cleavage and rejoining reactions. Mol. Microbiol. 15:865-870.
    • (1995) Mol. Microbiol. , vol.15 , pp. 865-870
    • Leschziner, A.E.1    Boocock, M.R.2    Grindley, N.D.F.3
  • 27
    • 0027535528 scopus 로고
    • Mapping interactions between the catalytic domain of resolvase and its DNA substrate using cysteine-coupled EDTA-iron
    • Mazzarelli, J. M., M. R. Ermácora, R. O. Fox, and N. D. F. Grindley. 1993. Mapping interactions between the catalytic domain of resolvase and its DNA substrate using cysteine-coupled EDTA-iron. Biochemistry 32:2979-2986.
    • (1993) Biochemistry , vol.32 , pp. 2979-2986
    • Mazzarelli, J.M.1    Ermácora, M.R.2    Fox, R.O.3    Grindley, N.D.F.4
  • 28
    • 0023992694 scopus 로고
    • Site-specific recombination in bacteriophage Mu: Characterization of binding sites for the DNA invertase Gin
    • Mertens, G., A. Klippel, H. Fuss, H. Blöcker, R. Frank, and R. Kahmann. 1988. Site-specific recombination in bacteriophage Mu: characterization of binding sites for the DNA invertase Gin. EMBO J. 7:1219-1227.
    • (1988) EMBO J. , vol.7 , pp. 1219-1227
    • Mertens, G.1    Klippel, A.2    Fuss, H.3    Blöcker, H.4    Frank, R.5    Kahmann, R.6
  • 29
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
    • Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.H.1
  • 30
    • 0002079838 scopus 로고
    • A plasmid extraction procedure on a miniprep scale
    • Morelle, G. 1989. A plasmid extraction procedure on a miniprep scale. Focus 11:7-8.
    • (1989) Focus , vol.11 , pp. 7-8
    • Morelle, G.1
  • 31
    • 0021193629 scopus 로고
    • Mutants of the γδ resolvase: A genetic analysis of the recombination function
    • Newman, B. J., and N. D. F. Grindley. 1984. Mutants of the γδ resolvase: a genetic analysis of the recombination function. Cell 38:463-469.
    • (1984) Cell , vol.38 , pp. 463-469
    • Newman, B.J.1    Grindley, N.D.F.2
  • 32
    • 0024278670 scopus 로고
    • Suicide recombination substrates yield covalent λ integrase-DNA complexes and lead to identification of the active site tyrosine
    • Pargellis, C. A., S. E. Nunes-Düby, L. Moitoso de Vargas, and A. Landy. 1988. Suicide recombination substrates yield covalent λ integrase-DNA complexes and lead to identification of the active site tyrosine. J. Biol. Chem. 263:7678-7685.
    • (1988) J. Biol. Chem. , vol.263 , pp. 7678-7685
    • Pargellis, C.A.1    Nunes-Düby, S.E.2    De Moitoso Vargas, L.3    Landy, A.4
  • 33
    • 0020822639 scopus 로고
    • DNA inversions in the chromosome of Escherichia coli and in bacteriophage Mu: Relationship to other site-specific recombination systems
    • Plasterk, R. H. A., A. Brinkman, and P. van der Putte. 1983. DNA inversions in the chromosome of Escherichia coli and in bacteriophage Mu: relationship to other site-specific recombination systems. Proc. Natl. Acad. Sci. USA 80:2444-2448.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 2444-2448
    • Plasterk, R.H.A.1    Brinkman, A.2    Van Der Putte, P.3
  • 34
    • 0024468976 scopus 로고
    • Molecular characterization of two proteins involved in the excision of the conjugative transposon Tn1545: Homologies with other site-specific recombinases
    • Poyart-Salmeron, C., P. Trieu-Cuot, C. Carlier, and P. Courvalin. 1989. Molecular characterization of two proteins involved in the excision of the conjugative transposon Tn1545: homologies with other site-specific recombinases. EMBO J. 8:2425-2433.
    • (1989) EMBO J. , vol.8 , pp. 2425-2433
    • Poyart-Salmeron, C.1    Trieu-Cuot, P.2    Carlier, C.3    Courvalin, P.4
  • 35
    • 0025153295 scopus 로고
    • The integration-excision system of the conjugative transposon Tn1545 is structurally and functionally related to those of lambdoid phages
    • Poyart-Salmeron, C., P. Trieu-Cuot, C. Carlier, and P. Courvalin. 1990. The integration-excision system of the conjugative transposon Tn1545 is structurally and functionally related to those of lambdoid phages. Mol. Microbiol. 4:1513-1521.
    • (1990) Mol. Microbiol. , vol.4 , pp. 1513-1521
    • Poyart-Salmeron, C.1    Trieu-Cuot, P.2    Carlier, C.3    Courvalin, P.4
  • 36
    • 0027955706 scopus 로고
    • The promiscuous plasmids pIP501 and pAMβ1 from gram-positive bacteria encode complementary resolution functions
    • Pujol, C., S. D. Ehrlich, and L. Janniere. 1994. The promiscuous plasmids pIP501 and pAMβ1 from gram-positive bacteria encode complementary resolution functions. Plasmid 31:100-105.
    • (1994) Plasmid , vol.31 , pp. 100-105
    • Pujol, C.1    Ehrlich, S.D.2    Janniere, L.3
  • 37
    • 0021665681 scopus 로고
    • Resolvase-mediated recombination intermediates contain a serine residue covalently linked to DNA
    • Reed, R. R., and C. D. Moser. 1984. Resolvase-mediated recombination intermediates contain a serine residue covalently linked to DNA. Cold Spring Harbor Symp. Quant. Biol. 49:245-249.
    • (1984) Cold Spring Harbor Symp. Quant. Biol. , vol.49 , pp. 245-249
    • Reed, R.R.1    Moser, C.D.2
  • 38
    • 0020367273 scopus 로고
    • Nucleotide sequence of γδ resolvase gene and demonstration that its gene product acts as a repressor of transcription
    • Reed, R. R., G. I. Shibuya, and J. A. Steiz. 1982. Nucleotide sequence of γδ resolvase gene and demonstration that its gene product acts as a repressor of transcription. Nature 300:381-383.
    • (1982) Nature , vol.300 , pp. 381-383
    • Reed, R.R.1    Shibuya, G.I.2    Steiz, J.A.3
  • 41
    • 0024044902 scopus 로고
    • An intermediate in transposition of the conjugative transposon Tn916
    • Scott, J. R., P. A. Kirchman, and M. G. Caparon. 1988. An intermediate in transposition of the conjugative transposon Tn916. Proc. Natl. Acad. Sci. USA 85:4809-4813.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 4809-4813
    • Scott, J.R.1    Kirchman, P.A.2    Caparon, M.G.3
  • 42
    • 0022407696 scopus 로고
    • Complete nucleotide sequence of macrolide-lincosamide-streptogramin B-resistance transposon Tn917 in Streptococcus faecalis
    • Shaw, J. H., and D. B. Clewell. 1985. Complete nucleotide sequence of macrolide-lincosamide-streptogramin B-resistance transposon Tn917 in Streptococcus faecalis. J. Bacteriol. 164:782-796.
    • (1985) J. Bacteriol. , vol.164 , pp. 782-796
    • Shaw, J.H.1    Clewell, D.B.2
  • 43
    • 0001070790 scopus 로고
    • Tn3 and related transposable elements: Site-specific recombination and transposition
    • D. E. Berg and M. M. Howe (ed.), American Society for Microbiology, Washington, D.C.
    • Sherratt, D. 1989. Tn3 and related transposable elements: site-specific recombination and transposition, p. 163-184. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
    • (1989) Mobile DNA , pp. 163-184
    • Sherratt, D.1
  • 44
    • 0041533023 scopus 로고
    • Phase variation in Salmonella: Genetic analysis of a recombinational switch
    • Silverman, M., J. Zieg, M. Hilmen, and M. I. Simon. 1979. Phase variation in Salmonella: genetic analysis of a recombinational switch. Proc. Natl. Acad. Sci. USA 76:391-395.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 391-395
    • Silverman, M.1    Zieg, J.2    Hilmen, M.3    Simon, M.I.4
  • 46
    • 0024499208 scopus 로고
    • Chromosomal rearrangement generating a composite gene for a developmental transcription factor
    • Stragier, P., B. Kunkel, L. Kroos, and R. Losick. 1989. Chromosomal rearrangement generating a composite gene for a developmental transcription factor. Science 243:507-512.
    • (1989) Science , vol.243 , pp. 507-512
    • Stragier, P.1    Kunkel, B.2    Kroos, L.3    Losick, R.4
  • 47
    • 0025768435 scopus 로고
    • Site-specific recombinase genes in three Shigella subgroups and nucleotide sequences of a pinB gene and an invertible B segment from Shigella boydii
    • Tominaga, A., S. Ikemizu, and M. Enomoto. 1991. Site-specific recombinase genes in three Shigella subgroups and nucleotide sequences of a pinB gene and an invertible B segment from Shigella boydii. J. Bacteriol. 173:4079-4087.
    • (1991) J. Bacteriol. , vol.173 , pp. 4079-4087
    • Tominaga, A.1    Ikemizu, S.2    Enomoto, M.3
  • 48
    • 0021326861 scopus 로고
    • A Mu gin complementing function and an invertible DNA region in Escherichia coli K-12 are situated on the genetic element e14
    • van de Putte, P., R. Plasterk, and A. Kuijpers. 1984. A Mu gin complementing function and an invertible DNA region in Escherichia coli K-12 are situated on the genetic element e14. J. Bacteriol. 158:517-522.
    • (1984) J. Bacteriol. , vol.158 , pp. 517-522
    • Van De Putte, P.1    Plasterk, R.2    Kuijpers, A.3
  • 49
    • 0025823863 scopus 로고
    • Isolation and detection of urease genes in Ureaplasma urealyticum
    • Willoughby, J. J., W. C. Russell, D. Thirkell, and M. G. Burdon. 1991. Isolation and detection of urease genes in Ureaplasma urealyticum. Infect. Immun. 59:2463-2469.
    • (1991) Infect. Immun. , vol.59 , pp. 2463-2469
    • Willoughby, J.J.1    Russell, W.C.2    Thirkell, D.3    Burdon, M.G.4
  • 50
    • 0018963239 scopus 로고
    • Analysis of the nucleotide sequence of an invertible controlling element
    • Zeig, J., and M. Simon. 1980. Analysis of the nucleotide sequence of an invertible controlling element. Proc. Natl. Acad. Sci. USA 77:4196-4200.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 4196-4200
    • Zeig, J.1    Simon, M.2
  • 51
    • 0023359283 scopus 로고
    • DNA mismatch-repair in Escherichia coli counteracting the hydrolytic deamination of 5-ethyl-cytosine residues
    • Zell, R., and H.-J. Fritz. 1987. DNA mismatch-repair in Escherichia coli counteracting the hydrolytic deamination of 5-ethyl-cytosine residues. EMBO J. 6:1809-1815.
    • (1987) EMBO J. , vol.6 , pp. 1809-1815
    • Zell, R.1    Fritz, H.-J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.