Genotypic and phenotypic variation of selected Saint Louis encephalitis viral strains isolated in California

American Journal of Tropical Medicine and Hygiene

Volumn 57, Issue 2, 1997, Pages 222-229

  Kramer, Laura D ^a   Presser, Sally B ^b   Hardy, James L ^d   Jackson, Andrew O ^c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; CONTROLLED STUDY; CULEX; GENETIC VARIABILITY; GENOTYPE; GEOGRAPHIC DISTRIBUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ST LOUIS FLAVIVIRUS; UNITED STATES; VIRUS ENVELOPE; VIRUS GENOME; VIRUS VIRULENCE;

ANIMALIA; AVES; FLAVIVIRUS; GALLUS GALLUS; ST. LOUIS ENCEPHALITIS VIRUS;

EID: 0030852683     PISSN: 00029637     EISSN: None     Source Type: Journal    
DOI: 10.4269/ajtmh.1997.57.222     Document Type: Article

References (44)

1. Reeves WC, 1990. Clinical and subclinical disease in man. Reeves WC, ed. Epidemiology and Control of Mosquito-Borne Arboviruses in California, 1943-1987. Sacramento, CA: California Mosquito and Vector Association, Inc., 1-25.
2. Monath TP, Cropp CB, Bowen GS, Kemp GE, Mitchell CJ, Gardner JJ, 1980. Variation in virulence for mice and Rhesus monkeys among St. Louis encephalitis virus strains of different origin. Am J Trop Med Hyg 29: 948-962.
3. Bowen GS, Monath TP, Kemp GE, Kerschner JH, Kirk LJ, 1980. Geographic variation among St. Louis encephalitis virus strains in viremic response of avian hosts. Am J Trop Med Hyg 29: 1411-1419.
4. Mitchell CJ, Gubler DJ, Monath TP, 1983. Variation in infectivity in Saint Louis encephalitis viral strains for Culex pipiens quinquefasciatus (Diptera:Culicadae). J Med Entomol 20: 526-533.
5. Trent DW, Grant JA, Vorndam AV, Monath TP, 1981. Genetic heterogeneity among Saint Louis encephalitis virus isolates of different geographic origin. Virology 114: 319-332.
6. Hardy JL, Presser SB, Meyer RP, Reisen WK, Kramer LD, Vorndam AV, 1986. Comparison of a 1984 Los Angeles strain of SLE virus with earlier California strains of SLE virus: mouse virulence, chicken viremogenic, RNA oligonucleotide and vector competence characteristics. Proc Cal Mosq Vector Control Assoc 53: 10-15.
7. Rice CM, Strauss EG, Strauss JH, 1986. Structure of the Flavivirus genome. Schlesinger M, Schlesinger S, eds. Togaviridae and Flaviviridae. New York: Plenum Press, 279-376.
8. Cleaves GR, Durbin DT, 1979. Methylation status of intracellular dengue type 2 40S RNA. Virology 96: 159-165.
9. Brinton MA, Dispoto JH, 1988. Sequence and secondary structure analysis of the 5′-terminal region of flavivirus genome RNA. Virology 162: 290-299.
10. Holzmann H, Heinz FX, Mandl CW, Guirakhoo F, Kunz C, 1990. A single amino acid substitution in envelope protein E of tick-borne encephalitis virus leads to attenuation in the mouse model. J Virol 64: 5156-5159.
11. Hahn CS, Dalrymple JH, Strauss JH, Rice CM, 1987. Comparison of the virulent Asibi strain of yellow fever virus with the 17D vaccine strain derived from it. Proc Natl Acad Sci USA 84: 2019-2023.
12. Lobigs M, Usha R, Nestorowicz A, Marshall ID, Weir RC, Dalgano L, 1990. Host cell selection of Murray Valley encephalitis virus variants altered at an RGD sequence in the envelope protein and in mouse virulence. Virology 176: 587-595.
13. Hahn CS, Galler R, Hunkapiller T, Dalrymple JM, Strauss JH, Strauss EG, 1988. Nucleotide sequence of dengue 2 RNA and comparison of the encoded proteins with those of other flaviviruses. Virology 162: 167-180.
14. Chen W-R, Tesh RB, Rico-Hesse R, 1990. Genetic variation of Japanese encephalitis virus in nature. J Gen Virol 71: 2915-2922.
15. Flynn LM, Coelen RJ, Mackenzie JS, 1989. Kunjin virus isolates of Australia are genetically homogeneous. J Gen Virol 70: 2819-2824.
16. Mackenzie JS, 1996. Molecular epidemiology and evolution of mosquito-borne flaviviruses and alphaviruses enzootic in Australia. Becker Y, ed. Molecular Evolution of Viruses: Past and Present. Norwell, MA: Kluwer Academic Publishers, 153-165.
17. Trent DW, Kinney RM, Johnson BJB, Vorndam AV, Grant JA, Deubel V, Rice CM, Hahn C, 1987. Partial nucleotide sequence of St. Louis encephalitis virus RNA: structural proteins, NS1, ns2a, and ns2b. Virology 156: 293-304.
18. Lewis JG, Chang GJ, Lanciotti RS, Trent DW, 1992. Direct sequencing of large flavivirus PCR products for analysis of genome variation and molecular epidemiological investigations. J Virol Methods 38: 11-23.
19. Bowen MD, Jackson AO, Bruns TD, Hacker DL, Hardy JL, 1995. Determination and comparative analysis of the small RNA genomic sequences of California encephalitis, Jamestown Canyon, Jerry Slough, Melao, Keystone and Trivittatus viruses (Bunyaviridae: genus Bunyavirus, California serogroup). J Gen Virol 76: 559-572.
20. Felsenstein J, 1991. PHYLIP (Phylogeny Inference Package) 3.4 Manual. Seattle: University of Washington.
21. Kimura M, 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
22. Fitch WM, Margoliash E, 1967. Construction of phylogenetic trees. Science 155: 279-284.
23. Swofford DL, 1991. PAUP: Phylogenetic Analysis Using Parsimony Version, 3.1.1. Champaign, IL: Illinois Natural History Survey.
24. Felsenstein J, 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
25. Davis JW, Hardy JL, 1973. In vitro studies with Modoc virus in Vero cells: plaque assay and kinetics of growth, neutralization, and thermal inactivation. Appl Microbiol 26: 344-348.
26. Rey FA, Heinz FX, Mandl C, Kunz C, Harrison SC, 1995. The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution. Nature 375: 291-298.
27. Wengler G, Castle E, Leidner U, Nowak T, Wengler G, 1985. Sequence analysis of the membrane protein V3 of the flavivirus West Nile virus and of its gene. Virology 147: 264-274.
28. Mitchell CJ, Francy DB, Monath TP, 1980. Arthropod vectors. Monath TP, ed. St. Louis Encephalitis. Washington, DC: American Public Health Association, Inc., 313-379.
29. DeMattos CC, DeMattos AC, MacLachlan NJ, Giavedoni LD, Yilma T, Osburn BI, 1996. Phylogenetic comparison of the S3 gene of United States prototype strains of bluetongue virus with that of field isolates from California. J Virol 70: 5735-5739.
30. Yamashita M, Krystal M, Fitch WM, Palese P, 1988. Influenza B virus evolution: co-circulating lineages and comparison of evolving pattern with those of influenza A and C viruses. Virology 163: 112-122.
31. Reeves WC, 1990. Overwintering of arboviruses. Reeves WC, ed. Epidemiology and Control of Mosquito-Borne Arboviruses in California, 1943-1987. Sacramento, CA: California Mosquito and Vector Association, Inc., 357-382.
32. McLean RG, Bowen GS, 1980. Vertebrate Hosts. Monath TP, ed. St. Louis Encephalitis. Washington, DC: American Public Health Association, Inc., 381-450.
33. Bailey CL, Eldridge BF, Hayes DE, Watts DM, Tammariello RF, Dalrymple JM, 1978. Isolation of St. Louis encephalitis virus from overwintering Culex pipiens mosquitoes. Science 199: 1346-1349.
34. Hardy JL, Rosen L, Kramer LD, Presser SB, Shroyer DA, Turell MJ, 1980. Effect of rearing temperature on transovarial transmission of St. Louis encephalitis virus in mosquitoes. Am J Trop Med Hyg 29: 963-968.
35. Reisen WK, Lothrop HD, Hardy JL, 1995. Bionomics of Culex tarsalis (Diptera: Culicidae) in relation to arbovirus transmission in southeastern California. J Med Entomol 32: 316-327.
36. Nichol ST, Rowe JE, Fitch WM, 1993. Punctuated equilibrium and positive Darwinian evolution in vesicular stomatitis virus. Proc Natl Acad Sci USA 90: 10424-10428.
37. Hardy JL, Reeves WC, 1990. Experimental studies on infection in vertebrate hosts. Reeves WC, ed. Epidemiology and Control of Mosquito-Borne Arboviruses in California, 1943-1987. Sacramento, CA: California Mosquito and Vector Association, Inc., 66-127.
38. Milby MM, Reeves WC, 1990. Natural infection in vertebrate hosts other than man. Reeves WC, ed. Epidemiology and Control of Mosquito-Borne Arboviruses in California, 1943-1987. Sacramento, CA: California Mosquito and Vector Association, Inc., 26-64.
39. Lindsay MDA, Coelen RJ, Mackenzie JS, 1993. Genetic heterogeneity among isolates of Ross River virus from different geographical regions. J Virol 67: 3576-3585.
40. Chungue E, Deubel V, Cassar O, Laille M, Martin PMV, 1993. Molecular epidemiology of dengue 3 viruses and genetic relatedness among dengue 3 strains isolated from patients with mild or severe form of dengue fever in French Polynesia. J Gen Virol 74: 2765-2770.
41. Wallner G, Mandl CW, Ecker M, Holzmann H, Stiasny K, Kunz C, Heinz FX, 1996. Characterization and complete genome sequences of high-and low-virulence variants of tick-borne encephalitis virus. J Gen Virol 77: 1035-1042.
42. Petty ITD, Hunter BG, Jackson AO, 1988. A novel strategy for one-step cloning of full-length cDNA and its application to the genome of barley stripe mosaic virus. Gene 74: 423-432.
43. Jackson AO, Petty ITD, Jones RW, Edwards MC, French R, 1991. Analysis of barley stripe mosaic virus pathogenicity. Semin Virol 2: 107-119.
44. Petty ITD, Donald RGK, Jackson AO, 1994. Multiple genetic determinants of barley stripe mosaic virus influence lesion phenotype on Chenopodium amaranticolor. Virology 198: 218-226.