Differentiation of Mycobacterium paratuberculosis isolates by rDNA-spacer analysis and random amplified polymorphic DNA patterns

Veterinary Microbiology

Volumn 57, Issue 2-3, 1997, Pages 151-158

  Scheibl, Peter ^a   Gerlach, Gerald F ^a  

^a Institut fur Mikrobiologie und Tierseuchen   (Germany)

Author keywords

Differentiation of isolates; Mycobacterium paratuberculosis; RAPD analysis

Indexed keywords

RIBOSOME DNA;

ARTICLE; CATTLE; CONTROLLED STUDY; DNA SEQUENCE; GERMANY; MYCOBACTERIUM PARATUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; RANDOM AMPLIFIED POLYMORPHIC DNA; SPECIES DIFFERENTIATION;

ANIMALS; BASE COMPOSITION; BASE SEQUENCE; CATTLE; CATTLE DISEASES; DNA PRIMERS; DNA, BACTERIAL; DNA, RIBOSOMAL; FECES; LYMPH NODES; MYCOBACTERIUM PARATUBERCULOSIS; PARATUBERCULOSIS; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 0030852474     PISSN: 03781135     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1135(97)00109-0     Document Type: Article

References (19)

1. Böddinghaus, B., Rogall, T., Flohr, T., Blöcker, H., Böttger, E.C., 1990. Detection and identification of mycobacteria by amplification of rRNA. J. Clin. Microbiol. 28, 1751-1759.
2. Chiodini, R.J., 1986. Biochemical characteristics of various strains of Mycobacterium paratuberculosis. Am. J. Vet. Res. 47, 1442-1445.
3. Chiodini, R.J., 1990. Characterization of Mycobacterium paratuberculosis and organisms of the Mycobacterium avium complex by restriction polymorphism of the rRNA gene region. J. Clin. Microbiol. 28, 489-494.
4. Collins, D.M., Gabric, D.M., de Lisle, G.W., 1990. Identification of two groups of Mycobacterium paratuberculosis strains by restriction endonuclease analysis and DNA hybridization. J. Clin. Microbiol. 28, 1591-1596.
5. Collins, D.M., Stephens, D.M., de Lisle, G.W., 1993. Comparison of polymerase chain reaction tests and faecal culture for detecting Mycobacterium paratuberculosis in bovine faeces. Vet. Microbiol. 36, 289-299.
6. Frothingham, R., Wilson, K.H., 1993. Sequence-based differentiation of strains in the Mycohacterium avium complex. J. Bacteriol. 175, 2818-2825.
7. Green, E.P., Tizard, M.L.V., Moss, M.T., Thompson, J., Winterbourne, D.J., McFadden, J.J., Hermon-Taylor, J., 1989. Sequence and characteristics of IS 900. an insertion element identified in a human Crohn's disease isolate of Mycobacterium paratuberculosis. Nucleic Acids Res. 22, 9063-9073.
8. Kreeger, J.M., 1991. Ruminant paratuberculosis - a century of progress and frustration. J. Vet. Diagn. Invest. 3, 373-383.
9. Linton, C.J., Jalal, H., Leeming, J.P., Millar, MR., 1994. Rapid discrimination of Mycobacterium tuberculosis strains by random amplified polymorphic DNA analysis. J. Clin. Microbiol. 32, 2169-2174.
10. Louie, M., Jayaratne, P., Luchsinger, I., Devenish, J., Yao, J., Schlech, W., Simor, A., 1996. Comparison of ribotyping, arbitrarily primed PCR, and pulsed-field gel electrophoresis for molecular typing of Listeria monocytogenes. J. Clin. Microbiol. 34, 15-19.
11. Merkal, R.S., 1984. Paratuberculosis: advances in cultural, serologic, and vaccination methods. J. Am. Vet. Med. Assoc. 184, 939-943.
12. Saxegaard, F., Baess, I., Jantzen, E., 1988. Characterization of clinical isolates of Mycobacterium paratuberculosis by DNA-DNA hybridization and cellular fatty acid analysis. Acta Pathol. Microbiol. Immunol. Scand. 96, 497-502.
13. Tang, Y.J., Houston, S.T., Gumerlock, P.H., Mulligan, M.E., Gerding, D.N., Johnson, S., Fekety, F.R., Silva, J., 1995. Comparison of arbitrarily primed PCR with restriction endonuclease and immunoblot analyses for typing Clostridium difficile isolates. J. Clin. Microbiol. 33, 3169-3173.
14. Thorel, M.-F., Krichevsky, M., Lévy-Frébault, V.V., 1990. Numerical taxonomy of mycobactin-dependent Mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobaclerium avium subsp. silvaticum subsp. nov. Int. J. Syst. Bacteriol. 40, 254-260.
15. Thoresen, O.F., Saxegaard, F., 1991. Gen-Probe rapid diagnostic system for the Mycobacterium avium complex does not distinguish between Mycobacterium avium and Mycobacterium paratuberculosis. J. Clin. Microbiol. 29, 625-626.
16. Van der Giessen, J.W.B., Haring, R.M., Van der Zeijst, B.A.M., 1994. Comparison of the 23S ribosomal RNA genes and the spacer region between the 16S and 23S rRNA genes of the closely related Mycobacterium avium and Mycobacterium paratuberculosis and the fast growing Mycobacterium phlei. Microbiol. 140, 1103-1108.
17. Whipple, D.L., Le Febvre, R.B., Andrews, R.E., Thiermann, A.B., 1987. Isolation and analysis of restriction endonuclease digestive patterns of chromosomal DNA from Mycobacterium paratuberculosis and other Mycobacterium species. J. Clin. Microbiol. 25, 1511-1515.
18. Whipple, D.L., Kapke, P.A., Vary, C., 1990. Identification of restriction fragment length polymorphisms in DNA from Mycobacterium paratuberculosis. J. Clin. Microbiol. 28, 2561-2564.
19. Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., Tingey, S.V., 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18, 6531-6535.