Effects of diaminopurine and inosine substitutions on A-tract induced DNA curvature. Importance of the 3'-A-tract junction

Nucleic Acids Research

Volumn 25, Issue 17, 1997, Pages 3497-3502

  Møllegaard, Niels Erik ^a   Bailly, Christian ^b   Waring, Michael J ^c   Nielsen, Peter E ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b CENTRE OSCAR LAMBRET   (France)

^c UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CURVED DNA; GUANOSINE; INOSINE; PURINE DERIVATIVE;

ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; DNA STRUCTURE; ELECTROPHORETIC MOBILITY; MOLECULAR MODEL; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; PRIORITY JOURNAL;

2-AMINOPURINE; ADENINE; BASE SEQUENCE; DEOXYRIBONUCLEASE ECORI; DEOXYRIBONUCLEASES, TYPE II SITE-SPECIFIC; DNA; ELECTROPHORESIS, POLYACRYLAMIDE GEL; INOSINE; NUCLEIC ACID CONFORMATION; PHOTOCHEMISTRY; POLYMERASE CHAIN REACTION; REPETITIVE SEQUENCES, NUCLEIC ACID; STRUCTURE-ACTIVITY RELATIONSHIP; URANYL NITRATE;

EID: 0030851911     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.17.3497     Document Type: Article

References (35)

1. Marini, J.C., Levene, S.D., Crothers, D.M. and Englund, P.T. (1982) Proc. Natl. Acad. Sci. USA, 79, 7664-7668.
2. Wu, H.-M. and Crothers, D.M. (1984) Nature, 308, 509-513.
3. Koo, H.-S., Wu, H.-M. and Crothers, D.M. (1986) Nature, 320, 501-506.
4. Hagerman, P.J. (1985) Biochemistry, 24, 7033-7037.
5. Ulanovsky, L.E. and Trifonov, E.N. (1987) Nature, 326, 720-722.
6. Trifonov, E.N. and Sussman, J.L. (1980) Proc. Natl. Acad. Sci. USA, 77, 3816-3820.
7. Bolshoy, A., McNamara, P., Harrington, R.E. and Trifonov, E.N. (1991) Proc. Natl. Acad. Sci. USA, 88, 2312-2316.
8. De Santis, P., Palleschi, A., Savino, M. and Scipioni, A. (1992) Biophys. Chem., 42, 147-152.
9. Haran, T.E. and Crothers, D.M. (1989) Biochemistry, 28, 2763-2767.
10. Leroy, J.-L., Charretier, E., Kochoyan, M. and Gueron, M. (1988) Biochemistry, 27, 8894-8898.
11. Haran, T.E., Kahn, J.K. and Crothers, D.M. (1994) J. Mol. Biol., 244, 135-143.
12. Goodsell, D.S., Kaczor-Grzeskowiak, M. and Dickerson, R.E. (1994) Biochemistry, 239, 79-96.
13. Grzeskowiak, K.G., Goodsell, D.S., Kaczor-Grzeskowiak, M., Cascio, D. and Dickerson, R.E. (1993) Biochemistry, 32, 8923-8931.
14. Goodsell, D.S., Kopka, M.L., Cascio, D. and Dickerson, R.E. (1993) Proc. Natl. Acad. Sci. USA, 90, 2931-2934.
15. Dickerson, R.E., Goodsell, D.S. and Neidle, S. (1994) Proc. Natl. Acad. Sci. USA, 91, 3579-3583.
16. Hagerman, P.J. (1986) Nature, 321, 449-450.
17. Hagerman, P.J. (1990) Annu. Rev. Biochem., 59, 755-781.
18. Koo, H.-S. and Crothers, D.M. (1987) Biochemistry, 26, 3745-3748.
19. Diekmann, S., von Kitzing, E., Mclaughlin, L., Ott, J. and Eckstein, F. (1987) Proc. Natl. Acad. Sci. USA, 84, 8257-8261.
20. Nagaich, A.K., Bhattacharyya, D., Brahmachari, S.K. and Bansal. M. (1994) J. Biol. Chem., 269, 7824-7833.
21. Bailly, C., Møllegaard, N.E., Nielsen, P.E. and Waring, M. (1995) EMBO J., 14, 2121-2131.
22. Bailly, C. and Waring, M.J. (1995) Nucleic Acids Res., 23, 885-892.
23. Nielsen, P.E., Jeppesen, C. and Buchardt, O. (1988) FEBS Lett., 235, 122-124.
24. Nielsen, P.E., Møllegaard, N.E. and Nielsen, P.E. (1990) Nucleic Acids Res., 18, 3847-3851.
25. Gryaznov, S. and Schultz, R.G. (1994) Tetrahedron Lett., 35, 2489-2492.
26. Nelson, H.C.M., Finch, J.T., Luisi, B.F. and Klug, A. (1987) Nature, 330, 221-226.
27. Coll, M., Frederick, C.A., Wang, A.H.-J. and Rich, A. (1987) Proc. Natl. Acad. Sci. USA, 84, 8385-8389.
28. Jeppesen, C. and Nielsen, P.E. (1989) Nucleic Acids Res., 17, 4947-4956.
29. Møllegaard, N.E., Rasmussen, P.E., Valentin-Hansen, P. and Nielsen, P.E. (1993) J. Biol. Chem., 268, 17471-17477.
30. Nielsen, P.E., Hiort, C., Buchardt, O., Dahl, O., Sönnichsen, S.H. and Norden, B. (1992) J. Am. Chem. Soc., 114, 4967-4975.
31. Sönnichsen, S.H. and Nielsen, P.E. (1996) J. Mol. Recognit., 9, 219-227.
32. Bone, S. and Small, C.A. (1995) Biochim. Biophys. Acta, 1260, 85-93.
33. Chuprina, V.P., Fedoroff, O.Y. and Reid, B.R. (1991) Biochemistry, 30, 561-568.
34. Xuan, J.-C. and Weber, I.T. (1992) Nucleic Acids Res., 20, 5457-5464.
35. Shatzky-Schwartz, M., Arbuckle, N.D., Eisenstein, M., Rabinovich, D., Bareket-Samish, A., Haran, T.E., Luisi, B.F. and Shakked, Z. (1997) J. Mol. Biol., 267, 595-623.