PCR-RFLP typing of ureC from Helicobacter pylori isolated from gastric biopsies during a European multi-country clinical trial

Journal of Antimicrobial Chemotherapy

Volumn 40, Issue 2, 1997, Pages 251-256

  Stone, Gregory G ^a   Shortridge, Dee ^a   Flamm, Robert K ^a   Beyer, Jill ^a   Ghoneim, Adeeb T ^b   Tanaka, S Ken ^a  

^a ABBOTT LABORATORIES   (United States)

^b ST JAMES S UNIVERSITY HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIINFECTIVE AGENT; CLARITHROMYCIN; OMEPRAZOLE;

ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; CLINICAL TRIAL; CONTROLLED CLINICAL TRIAL; CONTROLLED STUDY; DRUG EFFICACY; GENETIC HETEROGENEITY; GRAM NEGATIVE INFECTION; HELICOBACTER PYLORI; HUMAN; HUMAN TISSUE; MAJOR CLINICAL STUDY; MULTICENTER STUDY; NONHUMAN; PEPTIC ULCER; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; STOMACH BIOPSY; STRAIN DIFFERENCE;

ANTI-BACTERIAL AGENTS; ANTI-ULCER AGENTS; ANTIGENS, BACTERIAL; BACTERIAL PROTEINS; CLARITHROMYCIN; DOUBLE-BLIND METHOD; DUODENAL ULCER; GENES, BACTERIAL; HELICOBACTER INFECTIONS; HELICOBACTER PYLORI; HUMANS; OMEPRAZOLE; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH;

EID: 0030847452     PISSN: 03057453     EISSN: None     Source Type: Journal    
DOI: 10.1093/jac/40.2.251     Document Type: Article

References (32)

1. Blaser, M. J. (1990). Helicobacter pylori and the pathogenesis of gastroduodenal inflammation. Journal of Infectious Diseases 161, 626-33.
2. Marshall, B. J. (1990). Campylobacter pylori: its link to gastritis and peptic ulcer disease. Reviews of Infectious Diseases 12, Suppl. 1, S87-93.
3. Graham, D. Y., Lew, G. M., Klein, P. D., Evans, D. G., Evans, D. J., Saeed, Z. A. et al. (1992). Effect of treatment of Helicobacter pylori infection on the long-term recurrence of gastric or duodenal ulcer. A randomized, controlled study. Annals of Internal Medicine 116, 705-8.
4. Bayerdorffer, E., Neubauer, A., Rudolph, B., Thiede, C., Lehn, N., Eist, S. et al. (1995). Regression of primary gastric lymphoma of mucosa-associated lymphoid tissue type after cure of Helicobacter pylori infection. Lancet 345, 1591-4.
5. Patchett, S., Beattie, S., Leen, E., Keane, C. & O'Morain, C. (1992). Helicobacter pylori and duodenal ulcer recurrence. American Journal of Gastroenterology 87, 24-7.
6. Bell, G. D. & Powell, K. U. (1996). Helicobacter pylori reinfection after apparent eradication - the Ipswich experience. Scandinavian Journal of Gastroenterology, Suppl. 215, 96-104.
7. Burette, A., Glupczynski, Y. & De Prez, C. (1992). Evaluation of various multi-drug eradication regimens for Helicobacter pylori. European Journal of Gastroenterology and Hepatology 4, 817-23.
8. Lian, J. X., Carrick, J., Lee, A. & Daskalopoulos, G. (1993). Metronidazole resistance significantly affects eradication of Helicobacter pylori infection. Gastroenterology 104, Suppl., A133.
9. Cayla, R., Zerbib, F., Talbi, P., Mégraud, F. & Lamouliatte, H. (1995). Pre- and post-treatment clarithromycin resistance of Helicobacter pylori strains: a key factor of treatment failure. Gut 37, Suppl. 1, A55.
10. Xia, H. X., Buckley, M., Hyde, D., Keane, C. T. & O'Morain, C. A. (1995). Effects of antibiotic resistance on clarithromycin-combined triple therapy for Helicobacter pylori. Gut 37, Suppl. 1, A55.
11. Salama, S. M., Jiang, Q., Chang, N., Sherbaniuk, R. W. & Taylor, D. E. (1995). Characterization of chromosomal DNA profiles from Helicobacter pylori strains isolated from sequential gastric biopsy specimens. Journal of Clinical Microbiology 33, 2496-7.
12. Akopyanz, N., Bukanov, N. O., Westblom, T. U., Kresovich, S. & Berg, D. E. (1992). DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting. Nucleic Acids Research 20, 5137-42.
13. Berg, D. E., Akopyants, N. S. & Kersulyte, D. (1994). Finger-printing microbial genomes using the RAPD or AP-PCR method. Methods in Molecular and Cellular Biology 5, 13-24.
14. Owen, R. J., Bickley, J., Lastovica, A., Dunn, J. P., Borman, P. & Hunton, C. (1992). Ribosomal RNA gene patterns of Helicobacter pylori from surgical patients with healed and recurrent peptic ulcers. Epidemiology and Infection 108, 39-50.
15. Rautelin, H., Tee, W., Seppala, K. & Kosunen, T. U. (1994). Ribotyping patterns and emergence of metronidazole resistance in paired clinical samples of Helicobacter pylori. Journal of Clinical Microbiology 32, 1079-82.
16. Simor, A. E., Shames, B., Drumm, B., Sherman, P., Low, D. E. & Penner, J. L. (1990). Typing of Campylobacter pylori by bacterial DNA restriction endonuclease analysis and determination of plasmid profile. Journal of Clinical Microbiology 28, 83-6.
17. Taylor, D. E., Eaton, M., Chang, N. & Salama, S. M. (1992). Construction of a Helicobacter pylori genome map and demonstration of diversity at the genome level. Journal of Bacteriology 174, 6800-6.
18. Akopyanz, N., Bukanov, N. O., Westblom, T. U. & Berg, D. E. (1992). PCR-based RFLP analysis of DNA sequence diversity in the gastric pathogen Helicobacter pylori. Nucleic Adds Research 20, 6221-5.
19. Fujimoto, S., Marshall, B. & Blaser, M. J. (1994). PCR-based restriction fragment length polymorphism typing of Helicobacter pylori. Journal of Clinical Microbiology 32, 331-4.
20. National Committee for Clinical Laboratory Standards. (1997). Methods for Dilution Antimicrobial Susceptibility Tests for Bacteria that Grow Aerobically. 4th edn. Approved Standard M7-A4. NCCLS, Villanova, PA.
21. Hardy, D. J., Hanson, C. W., Hensey, D. M., Beyer, J. M. & Fernandes, P. B. (1988). Susceptibility of Campylobacter pylori to macrolides and fluoroquinolones. Journal of Antimicrobial Chemotherapy 22, 631-6.
22. Ghoneim, A. T., Langdale, P., Edmonds, A., Green, R., Reitmayer, R., Flamm, R. K. et al. (1996). Interpretive criteria for in vitro susceptibility testing of clarithromycin against Helicobacter pylori from a multicenter European clinical trial. In Third International Conference on the Macrolides, Azalides, and Streptogramins, Lisbon, 1996. Section 1, pp. 20-1.
23. Labigne, A., Cussac, V. & Courcoux, P. (1991). Shuttle cloning and nucleotide sequences of Helicobacter pylori genes responsible for urease activity. Journal of Bacteriology 173, 1920-31.
24. Cover, T. L., Tummuru, M. K., Cao, P., Thompson, S. A. & Blaser, M. J. (1994). Divergence of genetic sequences for the vacuolating cytotoxin among Helicobacter pylori strains. Journal of Biological Chemistry 269, 10566-73.
25. Tummuru, M. K., Cover, T. L. & Blaser, M. J. (1993). Cloning and expression of a high-molecular-mass major antigen of Helicobacter pylori: evidence of linkage to cytotoxin production. Infection and Immunity 61, 1799-809.
26. Stone, G. G., Shortridge, D., Flamm, R. K., Stamler, D. & Tanaka, S. K. (1997). PCR-RFLP typing of ureC from Helicobacter pylori isolated in Argentina from gastric biopsies before and after treatment with clarithromycin. Epidemiology and Infection 118, 119-24.
27. Shortridge, V. D., Stone, G. G., Flamm, R. K., Beyer, J., Versalovic, J., Graham, D. W. et al. (1997). Molecular typing of Helicobacter pylori isolates from a multicenter U.S. clinical trial using ureC restriction fragment length polymorphism. Journal of Clinical Microbiology 35, 471-3.
28. Leunk, R. D. (1991). Production of a cytotoxin by Helicobacter pylori. Reviews of Infectious Diseases 13, Suppl. 8, S686-9.
29. Cover, T. L., Dooley, C. P. & Blaser, M. J. (1990). Characterization of and human serologic response to proteins in Helicobacter pylori broth culture supernatants with vacuolizing cytotoxin activity. Infection and Immunity 56, 603-10.
30. Covacci, A., Censini, S., Bugnoli, M., Petracca, R., Burroni, D., Macchia, G. et al. (1993). Molecular characterization of the 128-kDa immunodominant antigen of Helicobacter pylori associated with cytotoxicity and duodenal ulcer. Proceedings of the National Academy of Sciences of the United States of America 90, 5791-5.
31. Crabtree, J. E., Figura, N., Taylor, J. D., Bugnoli, M., Armellini, D. & Tompkins, D. S. (1992). Expression of 120 kilodalton protein and cytoxicity in Helicobacter pylori. Journal of Clinical Pathology 45, 733-4.
32. Peek, R. M., Miller, G. G., Tham, K. T., Perez-Perez, G. I., Cover, T. L., Atherton, J. C. et al. (1995). Detection of Helicobacter pylori gene expression in human gastric mucosa. Journal of Clinical Microbiology 33, 28-32.