-
1
-
-
0024412497
-
Mutational effects on protein stability
-
Alber T. 1989. Mutational effects on protein stability. Annu Rev Biochem 58:765-98.
-
(1989)
Annu Rev Biochem
, vol.58
, pp. 765-798
-
-
Alber, T.1
-
2
-
-
0018793812
-
Crystallographic studies of the dynamic properties of lysozyme
-
Artymiuk PJ, Blake CCF, Grace DEP, Oatley SJ. Phillips DC, Sternberg MJE. 1979. Crystallographic studies of the dynamic properties of lysozyme. Nature 250:563-568.
-
(1979)
Nature
, vol.250
, pp. 563-568
-
-
Artymiuk, P.J.1
Blake, C.C.F.2
Grace, D.E.P.3
Oatley, S.J.4
Phillips, D.C.5
Sternberg, M.J.E.6
-
3
-
-
0025909418
-
Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths
-
Bell JA, Wilson KP, Zhang XJ, Faber HR, Nicholson H, Matthews BW. 1991. Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths. Proteins Struct Funct Genet 10:10-21.
-
(1991)
Proteins Struct Funct Genet
, vol.10
, pp. 10-21
-
-
Bell, J.A.1
Wilson, K.P.2
Zhang, X.J.3
Faber, H.R.4
Nicholson, H.5
Matthews, B.W.6
-
4
-
-
0020441466
-
Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 Å resolution. I. General features and binding of methotrexate
-
Bolin JT, Filman DJ, Matthews DA, Hamlin RC, Kraut J. 1982. Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 Å resolution. I. General features and binding of methotrexate. J Biol Chem 257:13650-13662.
-
(1982)
J Biol Chem
, vol.257
, pp. 13650-13662
-
-
Bolin, J.T.1
Filman, D.J.2
Matthews, D.A.3
Hamlin, R.C.4
Kraut, J.5
-
5
-
-
0000103283
-
Monte Carlo simulations on the like-charged guanidinium-guanidinium ion pair in water
-
Boudon S, Wipff G, Maigret B. 1990. Monte Carlo simulations on the like-charged guanidinium-guanidinium ion pair in water. J Phys Chem 94:6056-6061.
-
(1990)
J Phys Chem
, vol.94
, pp. 6056-6061
-
-
Boudon, S.1
Wipff, G.2
Maigret, B.3
-
6
-
-
0025141786
-
Surface tension measurements show that chaotropic salting-in denaturants are not just water-structure breakers
-
Breslow R, Guo T. 1990. Surface tension measurements show that chaotropic salting-in denaturants are not just water-structure breakers. Proc Natl Acad Sci USA 87:167-169.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 167-169
-
-
Breslow, R.1
Guo, T.2
-
7
-
-
0023140814
-
Crystallographic R factor refinement by molecular dynamics
-
Brünger AT, Kuriyan J, Karplus M. 1987. Crystallographic R factor refinement by molecular dynamics. Science 235:458-460.
-
(1987)
Science
, vol.235
, pp. 458-460
-
-
Brünger, A.T.1
Kuriyan, J.2
Karplus, M.3
-
8
-
-
0026065644
-
Crystal structure of unliganded Escherichia coli dihydrofolate reductase. Ligand-induced conformational changes and cooperativity in binding
-
Bystroff C, Kraut J. 1991. Crystal structure of unliganded Escherichia coli dihydrofolate reductase. Ligand-induced conformational changes and cooperativity in binding. Biochemistry 30:2227-2239.
-
(1991)
Biochemistry
, vol.30
, pp. 2227-2239
-
-
Bystroff, C.1
Kraut, J.2
-
9
-
-
0025270551
-
Crystal structures of Escherichia coli dihydrofolate reductase: The NADP+ holoenzyme and the folate-NADP+ ternary complex. Substrate binding and a model for the transition state
-
Bystroff C, Oatley SJ, Kraut J. 1990. Crystal structures of Escherichia coli dihydrofolate reductase: The NADP+ holoenzyme and the folate-NADP+ ternary complex. Substrate binding and a model for the transition state. Biochemistry 29:3263-3277.
-
(1990)
Biochemistry
, vol.29
, pp. 3263-3277
-
-
Bystroff, C.1
Oatley, S.J.2
Kraut, J.3
-
10
-
-
0028103275
-
-
Collaborative Computational Project, Number 4 1994. Acta Cryst D50:760-763.
-
(1994)
Acta Cryst
, vol.D50
, pp. 760-763
-
-
-
11
-
-
0020442184
-
Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 Å resolution. II. Environment of bound NADPH and implications for catalysis
-
Filman DJ, Bolin JT, Matthews DA, Kraut J. 1982. Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 Å resolution. II. Environment of bound NADPH and implications for catalysis. J Biol Chem 257:13663-13672.
-
(1982)
J Biol Chem
, vol.257
, pp. 13663-13672
-
-
Filman, D.J.1
Bolin, J.T.2
Matthews, D.A.3
Kraut, J.4
-
12
-
-
0017226279
-
Low resolution structure of the glycogen phosphorylase A monomer and comparison with phosphorylase B
-
Fletterick RJ, Sygusch J, Murray N, Madsen NB, Johnson LN. 1976. Low resolution structure of the glycogen phosphorylase A monomer and comparison with phosphorylase B. J Mol Biol 103:1-13.
-
(1976)
J Mol Biol
, vol.103
, pp. 1-13
-
-
Fletterick, R.J.1
Sygusch, J.2
Murray, N.3
Madsen, N.B.4
Johnson, L.N.5
-
13
-
-
0002365131
-
The relationship of structure to the effectiveness of denaturing agents for proteins
-
Gordon JA, Jencks WP. 1963. The relationship of structure to the effectiveness of denaturing agents for proteins. Biochemistry 2:47-57.
-
(1963)
Biochemistry
, vol.2
, pp. 47-57
-
-
Gordon, J.A.1
Jencks, W.P.2
-
14
-
-
0020170342
-
Conformational substates in a protein: Structure and dynamics of metmyoglobin at 80 K
-
Hartmann H, Parak F, Steigemann W, Petsko GA, Ponzi DR, Frauenfelder H. 1982. Conformational substates in a protein: structure and dynamics of metmyoglobin at 80 K. Proc Natl Acad Sci USA 79:4967-4971.
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 4967-4971
-
-
Hartmann, H.1
Parak, F.2
Steigemann, W.3
Petsko, G.A.4
Ponzi, D.R.5
Frauenfelder, H.6
-
16
-
-
0018266792
-
Expression of functionality of α-chymotrypsin. Effects of guanidine hydrochloride and urea in the onset of denaturation
-
Hibbard LS, Tulinski A. 1978. Expression of functionality of α-chymotrypsin. Effects of guanidine hydrochloride and urea in the onset of denaturation. Biochemistry 17:5460-5468.
-
(1978)
Biochemistry
, vol.17
, pp. 5460-5468
-
-
Hibbard, L.S.1
Tulinski, A.2
-
17
-
-
84945096204
-
Model bias in macromolecular crystal structures
-
Hodel A, Kim SH, Brünger AT. 1992. Model bias in macromolecular crystal structures. Acta Cryst A48:851-858.
-
(1992)
Acta Cryst
, vol.A48
, pp. 851-858
-
-
Hodel, A.1
Kim, S.H.2
Brünger, A.T.3
-
18
-
-
0027050469
-
Construction and characterization of a single polypeptide chain containing two enzymatically active dihydrofolate reductase domains
-
Iwakura M, Matthews CR. 1992. Construction and characterization of a single polypeptide chain containing two enzymatically active dihydrofolate reductase domains. Protein Eng 5:791-796.
-
(1992)
Protein Eng
, vol.5
, pp. 791-796
-
-
Iwakura, M.1
Matthews, C.R.2
-
19
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones TA, Zou JY, Cowan SW, Kjeldgaard M. 1991. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Cryst A47:110-119.
-
(1991)
Acta Cryst
, vol.A47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
20
-
-
0029001090
-
Direct NMR evidence for an intermediate preceding the rate-limiting step in the unfolding of ribonuclease A
-
Kiefhaber T, Labhardt AM, Baldwin RL. 1995. Direct NMR evidence for an intermediate preceding the rate-limiting step in the unfolding of ribonuclease A. Nature 375:513-515.
-
(1995)
Nature
, vol.375
, pp. 513-515
-
-
Kiefhaber, T.1
Labhardt, A.M.2
Baldwin, R.L.3
-
21
-
-
0027375522
-
Protein internal flexibility and global stability: Effect of urea on hydrogen exchange rates of bovine pancreatic trypsin inhibitor
-
Kim KS, Woodward C. 1993. Protein internal flexibility and global stability: Effect of urea on hydrogen exchange rates of bovine pancreatic trypsin inhibitor. Biochemistry 32:9609-9613.
-
(1993)
Biochemistry
, vol.32
, pp. 9609-9613
-
-
Kim, K.S.1
Woodward, C.2
-
22
-
-
0012433036
-
Crystalline forms of bovine pancreatic ribonuclease: Techniques of preparation, unit cells, and space groups
-
King MV, Magdoff BS, Adelman MB, Harker D. 1956. Crystalline forms of bovine pancreatic ribonuclease: Techniques of preparation, unit cells, and space groups. Acta Crystallogr 9:460-465.
-
(1956)
Acta Crystallogr
, vol.9
, pp. 460-465
-
-
King, M.V.1
Magdoff, B.S.2
Adelman, M.B.3
Harker, D.4
-
23
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski RA, MacArthur MW, Moss DS, Thornton JM. 1993. PROCHECK: A program to check the stereochemical quality of protein structures. J Appl Cryst 26:283-291.
-
(1993)
J Appl Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
24
-
-
0022349985
-
Study of ethanol-lysozyme interactions using neutron diffraction
-
Lehmann MS, Mason SA, McIntyre GJ. 1985. Study of ethanol-lysozyme interactions using neutron diffraction. Biochemistry 24:5862-5869.
-
(1985)
Biochemistry
, vol.24
, pp. 5862-5869
-
-
Lehmann, M.S.1
Mason, S.A.2
McIntyre, G.J.3
-
25
-
-
0024976535
-
Binding of dimethyl sulfoxide to lysozyme in crystals, studied with neutron diffraction
-
Lehmann MS, Stansfield RFD. 1989. Binding of dimethyl sulfoxide to lysozyme in crystals, studied with neutron diffraction. Biochemistry 28:7028-7033.
-
(1989)
Biochemistry
, vol.28
, pp. 7028-7033
-
-
Lehmann, M.S.1
Stansfield, R.F.D.2
-
26
-
-
0026729426
-
Protein interactions with urea and guanidinium chloride: A calorimetric study
-
Makhatadze G, Privalov PL. 1992. Protein interactions with urea and guanidinium chloride: A calorimetric study. J Mol Biol 226:491-505.
-
(1992)
J Mol Biol
, vol.226
, pp. 491-505
-
-
Makhatadze, G.1
Privalov, P.L.2
-
27
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews BW. 1968. Solvent content of protein crystals. J Mol Biol 33:491-497.
-
(1968)
J Mol Biol
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
29
-
-
0026672305
-
NMR determination of residual structure in a urea-denatured protein, the 434-repressor
-
Neri D, Billeter M, Wider G, Wütrich K. 1992. NMR determination of residual structure in a urea-denatured protein, the 434-repressor. Science 257:1559-1563.
-
(1992)
Science
, vol.257
, pp. 1559-1563
-
-
Neri, D.1
Billeter, M.2
Wider, G.3
Wütrich, K.4
-
30
-
-
0021191208
-
Fluctuations in protein structure from X-ray diffraction
-
Petsko GA, Ringe, DR. 1984. Fluctuations in protein structure from X-ray diffraction. Annu Rev Biophys Bioeng 13:331-371.
-
(1984)
Annu Rev Biophys Bioeng
, vol.13
, pp. 331-371
-
-
Petsko, G.A.1
Ringe, D.R.2
-
31
-
-
0028220369
-
A structural basis for the interaction of urea with lysozyme
-
Pike ACW, Acharya KR. 1994. A structural basis for the interaction of urea with lysozyme. Protein Sci 3:706-710.
-
(1994)
Protein Sci
, vol.3
, pp. 706-710
-
-
Pike, A.C.W.1
Acharya, K.R.2
-
32
-
-
33847800736
-
Interactions of urea and other polar compounds in water
-
Roseman M, Jencks WP. 1975. Interactions of urea and other polar compounds in water. J Am Chem Soc 97:631-640.
-
(1975)
J Am Chem Soc
, vol.97
, pp. 631-640
-
-
Roseman, M.1
Jencks, W.P.2
-
33
-
-
0023068366
-
The thermodynamic stability of proteins
-
Schellman JA. 1987. The thermodynamic stability of proteins. Ann Rev Biophys Biophys Chem 16:115-137.
-
(1987)
Ann Rev Biophys Biophys Chem
, vol.16
, pp. 115-137
-
-
Schellman, J.A.1
-
34
-
-
0000114334
-
The kinetics of protein denaturation. I. the behavior of the optical rotation of ovalbumin in urea solutions
-
Simpson RB, Kauzmann W. 1953. The kinetics of protein denaturation. I. The behavior of the optical rotation of ovalbumin in urea solutions. J Am Chem Soc 75:5139-5152.
-
(1953)
J Am Chem Soc
, vol.75
, pp. 5139-5152
-
-
Simpson, R.B.1
Kauzmann, W.2
-
35
-
-
0016345765
-
Crystallographic study of the interaction of urea with lysozyme
-
Snape KW, Tijan R, Blake CCF, Koshland DE. 1974. Crystallographic study of the interaction of urea with lysozyme. Nature 250:295-298.
-
(1974)
Nature
, vol.250
, pp. 295-298
-
-
Snape, K.W.1
Tijan, R.2
Blake, C.C.F.3
Koshland, D.E.4
-
36
-
-
0027479972
-
Peptide-urea interactions as observed in diketopiperazine-urea cocrystal
-
Thayer MM, Hailtwanger RC, Allured VS, Gill SC, Gill SJ. 1993. Peptide-urea interactions as observed in diketopiperazine-urea cocrystal. Biophys Chem 46:165-169.
-
(1993)
Biophys Chem
, vol.46
, pp. 165-169
-
-
Thayer, M.M.1
Hailtwanger, R.C.2
Allured, V.S.3
Gill, S.C.4
Gill, S.J.5
-
37
-
-
0026606219
-
Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease A at nine different temperatures from 98 to 320 K
-
Tilton RF Jr, Dewan JC, Petsko GA. 1992. Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease A at nine different temperatures from 98 to 320 K. Biochemistry 31:2469-2481.
-
(1992)
Biochemistry
, vol.31
, pp. 2469-2481
-
-
Tilton Jr., R.F.1
Dewan, J.C.2
Petsko, G.A.3
-
38
-
-
0026788012
-
Water as ligand: Preferential hydration and exclusion of denaturants in protein unfolding
-
Timasheff SN. 1992. Water as ligand: Preferential hydration and exclusion of denaturants in protein unfolding. Biochemistry 31:9857-9864.
-
(1992)
Biochemistry
, vol.31
, pp. 9857-9864
-
-
Timasheff, S.N.1
-
39
-
-
0027310845
-
The control of protein stability and association by weak interactions with water: How do solvents affect these processes?
-
Timasheff SN. 1993. The control of protein stability and association by weak interactions with water: How do solvents affect these processes? Annu Rev Biophys Biomol Struct 22:67-97.
-
(1993)
Annu Rev Biophys Biomol Struct
, vol.22
, pp. 67-97
-
-
Timasheff, S.N.1
-
40
-
-
33947485233
-
Nonpolar group participation in the denaturation of proteins by urea and guanidinium salts. Model compound studies
-
Wetlaufer DB, Malik SK, Stoller L, Coffin RL. 1964. Nonpolar group participation in the denaturation of proteins by urea and guanidinium salts. Model compound studies. J Am Chem Soc 86:508-514.
-
(1964)
J Am Chem Soc
, vol.86
, pp. 508-514
-
-
Wetlaufer, D.B.1
Malik, S.K.2
Stoller, L.3
Coffin, R.L.4
-
41
-
-
0001210234
-
The probability distribution of X-ray intensities
-
Wilson AJC. 1949. The probability distribution of X-ray intensities. Acta Crystallogr 2:318-321.
-
(1949)
Acta Crystallogr
, vol.2
, pp. 318-321
-
-
Wilson, A.J.C.1
-
42
-
-
0021111042
-
Structure of ribonuclease A: Results of joint neutron and X-ray refinement at 2.0 Å resolution
-
Wlodower A, Sjölin, L. 1983. Structure of ribonuclease A: Results of joint neutron and X-ray refinement at 2.0 Å resolution. Biochemistry 22:2720-2728.
-
(1983)
Biochemistry
, vol.22
, pp. 2720-2728
-
-
Wlodower, A.1
Sjölin, L.2
-
43
-
-
0029103572
-
A structural explanation for enzyme memory in nonaqueous solvents
-
Yennawar HP, Yennawar NH, Farber GK. 1995. A structural explanation for enzyme memory in nonaqueous solvents. J Am Chem Soc 117:577-585.
-
(1995)
J Am Chem Soc
, vol.117
, pp. 577-585
-
-
Yennawar, H.P.1
Yennawar, N.H.2
Farber, G.K.3
-
45
-
-
0017335799
-
Crystallographic studies of protein denaturation and renaturations. 2. Sodium dodecyl sulfate induced structural changes in triclinic lysozyme
-
Yonath A, Podjarny A, Honig B, Sielecki A, Traub W. 1977. Crystallographic studies of protein denaturation and renaturations. 2. Sodium dodecyl sulfate induced structural changes in triclinic lysozyme. Biochemistry 16:1418-1424.
-
(1977)
Biochemistry
, vol.16
, pp. 1418-1424
-
-
Yonath, A.1
Podjarny, A.2
Honig, B.3
Sielecki, A.4
Traub, W.5
-
46
-
-
0017913146
-
Structural analysis of denaturant-protein interactions: Comparison between the effects of bromoethanol and SDS on denaturation and renaturation of triclinic lysozyme
-
Yonath A, Podjamy A, Honig B, Traub W, Sielecki A, Herzberg O, Moult J. 1978. Structural analysis of denaturant-protein interactions: Comparison between the effects of bromoethanol and SDS on denaturation and renaturation of triclinic lysozyme. Biophys Struct Mech 4:27-36.
-
(1978)
Biophys Struct Mech
, vol.4
, pp. 27-36
-
-
Yonath, A.1
Podjamy, A.2
Honig, B.3
Traub, W.4
Sielecki, A.5
Herzberg, O.6
Moult, J.7
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