A comparative study on the structure of double-stranded antiparallel poly(riboguanylic acid)-poly(ribocytidylic acid) and poly(deoxyriboguanylic acid)-poly(deoxyribocytidylic acid) helices in solution by pulsed electric linear dichroism

Journal of Physical Chemistry B

Volumn 101, Issue 5, 1997, Pages 837-845

  Yamaoka, Kiwamu ^a   Yamamoto, Yutaka ^a   Fujita, Yoshimasa ^a   Ojima, Noriyuki ^a  

^a HIROSHIMA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BIOPOLYMERS; DATA REDUCTION; ELECTRIC FIELD MEASUREMENT; FRACTIONATION; LIGHT ABSORPTION; PHASE TRANSITIONS; SOLUTIONS; STRUCTURE (COMPOSITION); X RAY DIFFRACTION;

IONIC SOLUTIONS; POLYDEOXYRIBOCYTIDYLIC ACID; POLYDEOXYRIBOGUANYLIC ACID; POLYRIBOCYTIDYLIC ACID; POLYRIBOGUANYLIC ACID; PULSED ELECTRIC LINEAR DICHROISM; SONICATION;

DNA;

EID: 0030836980     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp962590m     Document Type: Review

References (37)

1. Charney, E. Q. Rev. Biophys. 1988, 21, 1-60.
2. Norden, B.; Kubista, M.; Kurucsev, T. Q. Rev. Biophys. 1992, 25, 51-170.
3. Yamaoka, K.; Matsuda, K. Macromolecules 1981, 14, 595-601. Also see references cited therein.
4. Yamaoka, K.; Fukudome, K. J. Phys. Chem. 1990, 94, 6896-6903. Also see references cited therein.
5. Fukudome, K.; Kumamoto, Y.; Yamaoka, K. Polym. J. 1995, 27, 101-110. Also references cited therein.
6. Ojima, N.; Fukudome, K.; Yamaoka, K. J. Sci. Hiroshima Univ., Ser. A 1995, 59, 119-164.
7. Yamaoka, K.; Ojima, N.; Fujita, Y. J. Phys. Chem., in press.
8. Arnott, S. Prog. Biophys. Mol. Biol. 1970, 21, 265-319.
9. Arnott, S.; Selsing, E. J. Mol. Biol. 1974, 88, 509-521.
10. Saenger, W. Principles of Nucleic Acid Structure; Springer-Verlag: New York, 1984; Chapters 9-11.
11. Ojima, N.; Yamaoka, K. Manuscript submitted to Biophys. J.
12. Arnott, S.; Bond, P. J.; Selsing, E.; Smith, P. J. C. Nucleic Acid. Res. 1976, 3, 2459-2470.
13. Arnott, S.; Selsing, E. J. Mol. Biol. 1974, 88, 551-552.
14. Tanigawa, M.; Mukaiyama, N.; Shimokubo, S.; Wakabayashi, K.; Fujita, Y.; Fukudome, K.; Yamaoka, K. Polym. J. 1994, 26, 291-302. Also references cited therein.
15. Ojima, N.; Fukudome, K.; Yamaoka, K. Polym. J. 1994, 26, 303-314.
16. Mathelier, H. D.; Howard, F. B.; Miles, H. T. Biopolvmers 1979, 18, 709-722.
17. Edmondson, S. P.; Johnson, W. C., Jr. Biopolymers 1986, 25, 2335-2348.
18. Chou, P.-J.; Johnson, W. C., Jr. J. Am. Chem. Soc. 1993, 115, 1205-1214.
19. Clark, L. B. J. Am. Chem. Soc. 1977, 99, 3934-3938.
20. Zaloudek, F.; Novros, J. S.; Clark, L. B. J. Am. Chem. Soc. 1985, 707, 7344-7351.
21. Fucaloro, A. F.; Forster, L. S. J. Am. Chem. Soc. 1971, 95, 6443-6448.
22. Matsuoka, Y.; Nordén, B. J. Phys. Chem. 1982, 86, 1378-1386.
23. Hug, W.; Tinoco, I., Jr. J. Am. Chem. Soc. 1973, 95, 2803-2813.
24. Theiste, D.; Callis, P. R.; Woody, R. W. J. Am. Chem. Soc. 1991, 113, 3260-3267.
25. Fukudome, K.; Yamaoka, K.; Yamaguchi, M. Polym. J. 1990, 22, 937-944.
26. Johnson, K. H.; Gray, D. M.; Morris, P. A.; Sutherland, J. C. Biopolymers 1990, 29, 325-333.
27. Yamaoka, K.; Charney, E. J. Am. Chem. Soc. 1972, 94, 8963-8974.
28. Tanigawa, M.; Yamaoka, K. Bull. Chem. Soc. Jpn. 1995, 68, 481-492.
29. Tanigawa, M.; Fukudome, K.; Yamaoka, K. J. Sci. Hiroshima Univ., Ser. A 1994, 58, 123-173.
30. Charney, E.; Yamaoka, K. Biochemistry 1982, 21, 834-842.
31. Matsuoka, Y.; Nordén, B. Biopolymers 1982, 21, 2433-2452.
32. Yamaoka, K.; Shimokubo. S.; Wakabayashi, K. Manuscript in preparation.
33. DeVoe, H.; Tinoco, I., Jr. J. Mol. Biol. 1962, 4, 500-517.
34. Yamaoka, K.; Fukudome, K. Bull. Chem. Soc. Jpn. 1983, 56, 60-65.
35. Yamaoka, K.; Yamamoto, S.; Ueda, K. J. Phys. Chem. 1985, 89, 5192-5197.
36. Broersma, S. J. Chem. Phys. 1960, 32, 1626-1631.
37. Broersma, S. J. Chem. Phys. 1981, 74, 6989-6990.