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Volumn 89, Issue 6, 1997, Pages 897-907

Frpo: A novel single-stranded DNA promoter for transcription and for primer RNA synthesis of DNA replication

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; MESSENGER RNA; RNA POLYMERASE; SINGLE STRANDED DNA;

EID: 0030831561     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(00)80275-5     Document Type: Article
Times cited : (58)

References (39)
  • 1
    • 0026532018 scopus 로고
    • PsiB, an anti-SOS protein, is transiently expressed by the F sex factor during its transmission to an Escherichia coli K-12 recipient
    • Bagdasarian, M., Bilone, A., Angulo, J., Sholz, P., Bagdasarian, M.M., and Devoret, R. (1992). PsiB, an anti-SOS protein, is transiently expressed by the F sex factor during its transmission to an Escherichia coli K-12 recipient. Mol. Microbiol. 6, 885-893.
    • (1992) Mol. Microbiol. , vol.6 , pp. 885-893
    • Bagdasarian, M.1    Bilone, A.2    Angulo, J.3    Sholz, P.4    Bagdasarian, M.M.5    Devoret, R.6
  • 2
    • 0017876540 scopus 로고
    • The RNA primer synthesized by primase to initiate phage G4 DNA replication
    • Bouche, J.-P., Rowen, L., and Kornberg, A. (1978). The RNA primer synthesized by primase to initiate phage G4 DNA replication. J. Biol. Chem. 253, 765-769.
    • (1978) J. Biol. Chem. , vol.253 , pp. 765-769
    • Bouche, J.-P.1    Rowen, L.2    Kornberg, A.3
  • 3
    • 2642656885 scopus 로고
    • F sex factor encodes a single-stranded DNA binding protein (SSB) with extensive sequence homology to Escherichia coli SSB
    • Chase, J.W., Merrill, B.M., and Williams, K.R. (1983). F sex factor encodes a single-stranded DNA binding protein (SSB) with extensive sequence homology to Escherichia coli SSB. Proc. Natl. Acad. Sci. USA 80, 5480-5484.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 5480-5484
    • Chase, J.W.1    Merrill, B.M.2    Williams, K.R.3
  • 4
    • 0021210041 scopus 로고
    • Transcriptional analysis of the leading region in F plasmid DNA transfer
    • Cram, D., Rat, A., O'Gorman, L., Skurray, R. (1984). Transcriptional analysis of the leading region in F plasmid DNA transfer. Plasmid 11, 221-233.
    • (1984) Plasmid , vol.11 , pp. 221-233
    • Cram, D.1    Rat, A.2    O'Gorman, L.3    Skurray, R.4
  • 5
    • 0342317574 scopus 로고
    • Trans-plication factors?
    • Dutta, A. (1993). Trans-plication factors? Curr. Biol. 3, 709-712.
    • (1993) Curr. Biol. , vol.3 , pp. 709-712
    • Dutta, A.1
  • 6
    • 0028335140 scopus 로고
    • Analysis of the sequence and gene products of the transfer region of the F sex factor
    • Frost, L.S., Ippen-Ihler, K., and Skurray, R.A. (1994). Analysis of the sequence and gene products of the transfer region of the F sex factor. Microbiol. Rev. 58, 162-210.
    • (1994) Microbiol. Rev. , vol.58 , pp. 162-210
    • Frost, L.S.1    Ippen-Ihler, K.2    Skurray, R.A.3
  • 7
    • 0347249969 scopus 로고
    • Enzymatic replication of the origin of the Escherichia coli chromosome
    • Fuller, R.S., Kaguni, J.M., and Kornberg, A. (1981). Enzymatic replication of the origin of the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 78, 7370-7374.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 7370-7374
    • Fuller, R.S.1    Kaguni, J.M.2    Kornberg, A.3
  • 8
    • 0016204556 scopus 로고
    • Conversion of the M13 viral single-strand to the double-stranded replicative forms by purified proteins
    • Geider, K., and Kornberg, A. (1974). Conversion of the M13 viral single-strand to the double-stranded replicative forms by purified proteins. J. Biol. Chem. 249, 3999-4005.
    • (1974) J. Biol. Chem. , vol.249 , pp. 3999-4005
    • Geider, K.1    Kornberg, A.2
  • 9
    • 0007559670 scopus 로고
    • RNA transcribed from DNA at the origin of phage fd single strand to replicative form conversion
    • Geider, K., Beck, E., and Schaller, H. (1978). RNA transcribed from DNA at the origin of phage fd single strand to replicative form conversion. Proc. Natl. Acad. Sci. USA 75, 645-649.
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 645-649
    • Geider, K.1    Beck, E.2    Schaller, H.3
  • 10
    • 0026778136 scopus 로고
    • Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition
    • Glucksmann, M.A., Markiewicz, P., and Rothman-Denes, L.B. (1992). Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition. Cell 70, 491-500.
    • (1992) Cell , vol.70 , pp. 491-500
    • Glucksmann, M.A.1    Markiewicz, P.2    Rothman-Denes, L.B.3
  • 11
    • 0027411071 scopus 로고
    • Nucleotide sequence of the primer RNA for DNA replication of filamentous bacteriophages
    • Higashitani, N., Higashitani, A., and Horiuchi, K. (1993). Nucleotide sequence of the primer RNA for DNA replication of filamentous bacteriophages. J. Virol. 67, 2175-2181.
    • (1993) J. Virol. , vol.67 , pp. 2175-2181
    • Higashitani, N.1    Higashitani, A.2    Horiuchi, K.3
  • 12
    • 0030229873 scopus 로고    scopus 로고
    • The recognition mechanisms of the minus-strand origin of phage f1 by Escherichia coli RNA polymerase
    • Higashitani, N., Higashitani, A., Guan, Z.-W., and Horiuchi, K. (1996). The recognition mechanisms of the minus-strand origin of phage f1 by Escherichia coli RNA polymerase. Genes to Cells 1, 829-841.
    • (1996) Genes to Cells , vol.1 , pp. 829-841
    • Higashitani, N.1    Higashitani, A.2    Guan, Z.-W.3    Horiuchi, K.4
  • 13
    • 0024357142 scopus 로고
    • Two single-strand DNA initiation signals located in the oriV region of plasmid RSF1010
    • Honda, Y., Sakai, H., Komano, T., and Bagdasarian, M. (1989). Two single-strand DNA initiation signals located in the oriV region of plasmid RSF1010. Gene 68, 155-159.
    • (1989) Gene , vol.68 , pp. 155-159
    • Honda, Y.1    Sakai, H.2    Komano, T.3    Bagdasarian, M.4
  • 14
    • 0017165107 scopus 로고
    • Origin and direction of synthesis of bacteriophage f1 DNA
    • Horiuchi, K., and Zinder, N.D. (1976). Origin and direction of synthesis of bacteriophage f1 DNA. Proc. Natl. Acad. Sci. USA 73, 2341-2345.
    • (1976) Proc. Natl. Acad. Sci. USA , vol.73 , pp. 2341-2345
    • Horiuchi, K.1    Zinder, N.D.2
  • 15
    • 0018351517 scopus 로고
    • Initiation of replication of plasmid ColE1 DNA by RNA polymerase, ribonuclease H, and DNA polymerase I
    • Itoh, T., and Tomizawa, J. (1978). Initiation of replication of plasmid ColE1 DNA by RNA polymerase, ribonuclease H, and DNA polymerase I. Cold Spring Harbor Symp. Quant. Biol. 43, 409-417.
    • (1978) Cold Spring Harbor Symp. Quant. Biol. , vol.43 , pp. 409-417
    • Itoh, T.1    Tomizawa, J.2
  • 16
    • 1842391776 scopus 로고
    • Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H
    • Itoh, T., and Tomizawa, J. (1980). Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H. Proc. Natl. Acad. Sci. USA 77, 2450-2454.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 2450-2454
    • Itoh, T.1    Tomizawa, J.2
  • 17
    • 0026520117 scopus 로고
    • Zygotic induction of plasmid ssb and piB genes following conjugative transfer of Incl1 plasmid Collb-P9
    • Jones, A.L., Barth, P.T., and Wilkins, B.M. (1992). Zygotic induction of plasmid ssb and piB genes following conjugative transfer of Incl1 plasmid Collb-P9. Mol. Microbiol. 6, 605-613.
    • (1992) Mol. Microbiol. , vol.6 , pp. 605-613
    • Jones, A.L.1    Barth, P.T.2    Wilkins, B.M.3
  • 18
    • 0020490610 scopus 로고
    • σ subunit of RNA polymerase holoenzyme confers specificity in priming M13 viral DNA replication
    • Kaguni, J.M., and Kornberg, A. (1982). σ subunit of RNA polymerase holoenzyme confers specificity in priming M13 viral DNA replication. J. Biol. Chem. 257, 5437-5443.
    • (1982) J. Biol. Chem. , vol.257 , pp. 5437-5443
    • Kaguni, J.M.1    Kornberg, A.2
  • 19
    • 0024745068 scopus 로고
    • Nucleotide sequence of the leading region adjacent to the origin of transfer on F and its conservation among conjugative plasmids
    • Loh, S., Cram, D., and Skurray, R. (1989). Nucleotide sequence of the leading region adjacent to the origin of transfer on F and its conservation among conjugative plasmids. Mol. Gen. Genet. 219, 177-186.
    • (1989) Mol. Gen. Genet. , vol.219 , pp. 177-186
    • Loh, S.1    Cram, D.2    Skurray, R.3
  • 20
    • 0028246888 scopus 로고
    • Escherichia coli single-stranded DNA binding protein: Multiple DNA-binding modes and cooperativities
    • Lohman, T.M., and Ferrari, M.E. (1994). Escherichia coli single-stranded DNA binding protein: multiple DNA-binding modes and cooperativities. Annu. Rev. Biochem. 63, 527-570.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 527-570
    • Lohman, T.M.1    Ferrari, M.E.2
  • 21
    • 0026705316 scopus 로고
    • Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase
    • Markiewicz, P., Malone, C., Chase, J.W., and Rothman-Denes, L.B. (1992). Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase. Genes Dev. 6, 2010-2019.
    • (1992) Genes Dev. , vol.6 , pp. 2010-2019
    • Markiewicz, P.1    Malone, C.2    Chase, J.W.3    Rothman-Denes, L.B.4
  • 22
    • 0024369687 scopus 로고
    • Leading strand synthesis of R1 plasmid replication in vitro is primed by primase alone at a specific site downstream of oriR
    • Masai, H., and Aral, K. (1989). Leading strand synthesis of R1 plasmid replication in vitro is primed by primase alone at a specific site downstream of oriR. J. Biol. Chem. 264, 8082-8090.
    • (1989) J. Biol. Chem. , vol.264 , pp. 8082-8090
    • Masai, H.1    Aral, K.2
  • 23
    • 0028998688 scopus 로고
    • Dnaa-dependent assembly of the ABC primosome at the A site, a single-stranded DNA hairpin containing a dnaA box
    • Masai, H., and Aral, K. (1995). DnaA-dependent assembly of the ABC primosome at the A site, a single-stranded DNA hairpin containing a dnaA box. Eur. J. Biochem. 230, 384-395.
    • (1995) Eur. J. Biochem. , vol.230 , pp. 384-395
    • Masai, H.1    Aral, K.2
  • 24
    • 85047173760 scopus 로고    scopus 로고
    • DnaA-and PriA-dependent primosomes: Two distinct replication complexes for replication of Escherichia coli chromosome
    • Masai, H., and Aral, K. (1996). DnaA-and PriA-dependent primosomes: two distinct replication complexes for replication of Escherichia coli chromosome. Frontiers in Bioscience 1, 49-59.
    • (1996) Frontiers in Bioscience , vol.1 , pp. 49-59
    • Masai, H.1    Aral, K.2
  • 25
    • 0025100292 scopus 로고
    • Roles of øX174-type primosome- and G4 type primase-dependent primings in initiation of lagging and leading strand syntheses of DNA replication
    • Masai, H., Nomura, N., and Arai, K. (1990a). Roles of øX174-type primosome- and G4 type primase-dependent primings in initiation of lagging and leading strand syntheses of DNA replication. J. Biol. Chem. 265, 15134-15144.
    • (1990) J. Biol. Chem. , vol.265 , pp. 15134-15144
    • Masai, H.1    Nomura, N.2    Arai, K.3
  • 26
    • 0025100292 scopus 로고
    • The ABC primosome: A novel priming system employing dnaA, dnaB, dnaC, and primase on a hairpin containing a dnaA box sequence
    • Masai, H., Nomura, N., Kubota, Y., and Arai, K. (1990b). The ABC primosome: a novel priming system employing dnaA, dnaB, dnaC, and primase on a hairpin containing a dnaA box sequence. J. Biol. Chem. 265, 15124-1513.
    • (1990) J. Biol. Chem. , vol.265 , pp. 15124-21513
    • Masai, H.1    Nomura, N.2    Kubota, Y.3    Arai, K.4
  • 27
    • 0028148226 scopus 로고
    • Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication
    • Masai, H., Asai, T., Kubota, Y., Arai, K., and Kogoma, T. (1994). Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication. EMBO J. 13, 5338-5345.
    • (1994) EMBO J. , vol.13 , pp. 5338-5345
    • Masai, H.1    Asai, T.2    Kubota, Y.3    Arai, K.4    Kogoma, T.5
  • 28
    • 0027528965 scopus 로고
    • An interaction between replication protein A and SV40 T antigen appears essential for primosome assembly during SV40 DNA replication
    • Melendy, A., and Stillman, B. (1993). An interaction between replication protein A and SV40 T antigen appears essential for primosome assembly during SV40 DNA replication. J. Biol. Chem. 268, 3389-3395.
    • (1993) J. Biol. Chem. , vol.268 , pp. 3389-3395
    • Melendy, A.1    Stillman, B.2
  • 29
    • 0020336297 scopus 로고
    • Selective cloning of ColE1 DNA initiation sequences using the cloning vector M13ΔE101
    • Nomura, N., Low, R.L., and Ray, D. (1982a). Selective cloning of ColE1 DNA initiation sequences using the cloning vector M13ΔE101. Gene 18, 239-246.
    • (1982) Gene , vol.18 , pp. 239-246
    • Nomura, N.1    Low, R.L.2    Ray, D.3
  • 30
    • 0019917528 scopus 로고
    • Identification of ColE1 DNA sequences that direct single strand-to-double strand conversion by a øX174 type mechanism
    • Nomura, N., Low, R.L., and Ray, D.S. (1982b). Identification of ColE1 DNA sequences that direct single strand-to-double strand conversion by a øX174 type mechanism. Proc. Natl. Acad. Sci. USA 79, 3153-3157.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 3153-3157
    • Nomura, N.1    Low, R.L.2    Ray, D.S.3
  • 31
    • 0025790154 scopus 로고
    • Identification of eleven single-stranded initiation sequences (ssi) for priming of DNa replication in the F, R6K, R100 and ColE2 plasmids
    • Nomura, N., Masai, H., Inuzuka, M., Miyazaki, C., Ohtsubo, E., Itoh, T., Sasamoto, S., Matsui, M., Ishizaki, R., and Aral, K. (1991) Identification of eleven single-stranded initiation sequences (ssi) for priming of DNA replication in the F, R6K, R100 and ColE2 plasmids. Gene 108, 15-22.
    • (1991) Gene , vol.108 , pp. 15-22
    • Nomura, N.1    Masai, H.2    Inuzuka, M.3    Miyazaki, C.4    Ohtsubo, E.5    Itoh, T.6    Sasamoto, S.7    Matsui, M.8    Ishizaki, R.9    Aral, K.10
  • 32
    • 0024511781 scopus 로고
    • Escherichia coli promoters I. Consensus as it relates to spacing class, specificity, repeat substructure, and three-dimensional organization
    • O'Neil, M.C. (1989). Escherichia coli promoters I. consensus as it relates to spacing class, specificity, repeat substructure, and three-dimensional organization. J. Biol. Chem. 264, 5522-5530.
    • (1989) J. Biol. Chem. , vol.264 , pp. 5522-5530
    • O'Neil, M.C.1
  • 33
    • 0020421805 scopus 로고
    • M13 vectors for selective cloning of sequences specifying initiation of DNA synthesis on single-stranded templates
    • Ray, D.S., Hines, J., Kim, M.H., Imber, N., and Nomura, N. (1982). M13 vectors for selective cloning of sequences specifying initiation of DNA synthesis on single-stranded templates. Gene 18, 231-238.
    • (1982) Gene , vol.18 , pp. 231-238
    • Ray, D.S.1    Hines, J.2    Kim, M.H.3    Imber, N.4    Nomura, N.5
  • 34
    • 0030576519 scopus 로고    scopus 로고
    • Base-specific recognition of the non-template strand of promoter DNA by E. Coli RNA polymerase
    • Roberts, C.W., and Roberts, J.W. (1996). Base-specific recognition of the non-template strand of promoter DNA by E. coli RNA polymerase. Cell 86, 495-501.
    • (1996) Cell , vol.86 , pp. 495-501
    • Roberts, C.W.1    Roberts, J.W.2
  • 36
    • 0025922333 scopus 로고
    • Plasmid Collb contains an ssi signal close to the replication origin
    • Tanaka, K., Sakai, T., Honda, Y., Sakai, H., and Komano, T. (1991) Plasmid Collb contains an ssi signal close to the replication origin. Plasmid 25, 125-130.
    • (1991) Plasmid , vol.25 , pp. 125-130
    • Tanaka, K.1    Sakai, T.2    Honda, Y.3    Sakai, H.4    Komano, T.5
  • 37
    • 0021433301 scopus 로고
    • The F plasmid origin of transfer: DNA sequence of wild-type and mutant origins and location of origin-specific nicks
    • Thompson, R., Taylor, L., Kelly, K., Everett, R., and Willetts, N. (1984). The F plasmid origin of transfer: DNA sequence of wild-type and mutant origins and location of origin-specific nicks. EMBO J. 3, 1175-1180.
    • (1984) EMBO J. , vol.3 , pp. 1175-1180
    • Thompson, R.1    Taylor, L.2    Kelly, K.3    Everett, R.4    Willetts, N.5
  • 38
    • 0019127851 scopus 로고
    • Nucleotide sequence of the filamentous bacteriophage M13 DNA genome: Comparison with phage fd genome
    • Van Wezenbeek, P., Hulsebos, T., and Schoenmakers, J.G.G. (1980). Nucleotide sequence of the filamentous bacteriophage M13 DNA genome: comparison with phage fd genome. Gene 11, 129-148.
    • (1980) Gene , vol.11 , pp. 129-148
    • Van Wezenbeek, P.1    Hulsebos, T.2    Schoenmakers, J.G.G.3
  • 39
    • 0021319941 scopus 로고
    • Processing of plasmid DNA during bacterial conjugation
    • Willetts, N., and Wilkins, B. (1984). Processing of plasmid DNA during bacterial conjugation. Microbiol. Rev. 48, 24-41.
    • (1984) Microbiol. Rev. , vol.48 , pp. 24-41
    • Willetts, N.1    Wilkins, B.2


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